RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 PVALBP20472 110 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-216ENST00000586813 SULT1A1P50225 295 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 LINC00315P59091 139 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 CD300CQ08708 224 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 EIF4E3Q8N5X7 224 aaKnown RBP13.31□□□□□ -0.28
TRAF4-216ENST00000586813 C2orf50Q96LR7 162 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 SEC22CQ9BRL7 303 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 LYRM2Q9NU23 88 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-216ENST00000586813 NDUFA13Q9P0J0 144 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 FUT9Q9Y231 359 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 PRELID1Q9Y255 219 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 TRAV6A0A075B6T7 132 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 IGSF23A1L1A6 192 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 TCRBP04435 133 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 PYYP10082 97 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 HIST1H1EP10412 219 aaKnown RBP13.3□□□□□ -0.28
TRAF4-216ENST00000586813 S100A11P31949 105 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 S100A10P60903 97 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 PDE6HQ13956 83 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 ANXA2RQ3ZCQ2 193 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 STX12Q86Y82 276 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 CHAC2Q8WUX2 184 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 LINC00477Q96M19 166 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 AGPAT4-IT1Q9H0P7 198 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 NUDT15Q9NV35 164 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 TIMM9Q9Y5J7 89 aa13.3□□□□□ -0.28
TRAF4-216ENST00000586813 FGF7P21781 194 aa13.29□□□□□ -0.28
TRAF4-216ENST00000586813 HBG1P69891 147 aa13.29□□□□□ -0.28
TRAF4-216ENST00000586813 HBG2P69892 147 aa13.29□□□□□ -0.28
TRAF4-216ENST00000586813 Q6ZRN7 208 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-216ENST00000586813 EXOC3-AS1Q8N2X6 119 aa13.29□□□□□ -0.28
TRAF4-216ENST00000586813 TMEM252Q8N6L7 170 aa13.29□□□□□ -0.28
TRAF4-216ENST00000586813 KLF12Q9Y4X4 402 aa13.29□□□□□ -0.28
TRAF4-216ENST00000586813 SPINK4O60575 86 aa13.28□□□□□ -0.28
TRAF4-216ENST00000586813 CRISP2P16562 243 aa13.28□□□□□ -0.28
TRAF4-216ENST00000586813 RNASE4P34096 147 aaKnown RBP13.28□□□□□ -0.28
TRAF4-216ENST00000586813 TCL1AP56279 114 aa13.28□□□□□ -0.28
TRAF4-216ENST00000586813 BLNKQ8WV28 456 aa13.28□□□□□ -0.28
TRAF4-216ENST00000586813 SIVA1O15304 175 aa13.27□□□□□ -0.29
TRAF4-216ENST00000586813 MPDU1O75352 247 aa13.27□□□□□ -0.29
TRAF4-216ENST00000586813 GPX1P07203 203 aa13.27□□□□□ -0.29
TRAF4-216ENST00000586813 RAB32Q13637 225 aa13.27□□□□□ -0.29
TRAF4-216ENST00000586813 GCSAMLQ5JQS6 135 aa13.27□□□□□ -0.29
TRAF4-216ENST00000586813 IBA57Q5T440 356 aaKnown RBP13.27□□□□□ -0.29
TRAF4-216ENST00000586813 C9orf47Q6ZRZ4 202 aa13.27□□□□□ -0.29
TRAF4-216ENST00000586813 ST6GAL2Q96JF0 529 aa13.27□□□□□ -0.29
TRAF4-216ENST00000586813 AAMDCQ9H7C9 122 aa13.27□□□□□ -0.29
TRAF4-216ENST00000586813 ICOSQ9Y6W8 199 aa13.27□□□□□ -0.29
TRAF4-216ENST00000586813 IGKV2-40A0A087WW87 121 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-216ENST00000586813 IGKV2D-40P01614 121 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-216ENST00000586813 NMBP08949 121 aa13.26□□□□□ -0.29
TRAF4-216ENST00000586813 IL15RAQ13261 267 aa13.26□□□□□ -0.29
TRAF4-216ENST00000586813 PRR9Q5T870 116 aa13.26□□□□□ -0.29
TRAF4-216ENST00000586813 ZFAND2AQ8N6M9 145 aa13.26□□□□□ -0.29
TRAF4-216ENST00000586813 SLC25A2Q9BXI2 301 aa13.26□□□□□ -0.29
TRAF4-216ENST00000586813 NPCDR1Q9BY65 106 aa13.26□□□□□ -0.29
TRAF4-216ENST00000586813 TP53TG3Q9ULZ0 132 aa13.26□□□□□ -0.29
TRAF4-216ENST00000586813 RGS13O14921 159 aa13.25□□□□□ -0.29
TRAF4-216ENST00000586813 PAX4O43316 350 aa13.25□□□□□ -0.29
TRAF4-216ENST00000586813 NXPH4O95158 308 aa13.25□□□□□ -0.29
TRAF4-216ENST00000586813 ICAM4Q14773 271 aa13.25□□□□□ -0.29
TRAF4-216ENST00000586813 ATP6V1FQ16864 119 aa13.25□□□□□ -0.29
TRAF4-216ENST00000586813 GPN1Q9HCN4 374 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-216ENST00000586813 MRPL16Q9NX20 251 aaKnown RBP13.25□□□□□ -0.29
TRAF4-216ENST00000586813 IGHV3-53P01767 116 aa13.24□□□□□ -0.29
TRAF4-216ENST00000586813 TMEM78Q5T7P6 136 aa13.24□□□□□ -0.29
TRAF4-216ENST00000586813 FAM122CQ6P4D5 195 aa13.24□□□□□ -0.29
TRAF4-216ENST00000586813 VGLL1Q99990 258 aa13.24□□□□□ -0.29
TRAF4-216ENST00000586813 PRO0255Q9UI72 69 aa13.24□□□□□ -0.29
TRAF4-216ENST00000586813 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
TRAF4-216ENST00000586813 H2AFB2P0C5Z0 115 aa13.23□□□□□ -0.29
TRAF4-216ENST00000586813 Q6ZQT7 251 aa13.23□□□□□ -0.29
TRAF4-216ENST00000586813 FAM167A-AS1Q96KT0 104 aa13.23□□□□□ -0.29
TRAF4-216ENST00000586813 ARPC5LQ9BPX5 153 aa13.23□□□□□ -0.29
TRAF4-216ENST00000586813 ZNF492Q9P255 531 aa13.23□□□□□ -0.29
TRAF4-216ENST00000586813 MIR17HGQ75NE6 70 aa13.22□□□□□ -0.29
TRAF4-216ENST00000586813 THAP6Q8TBB0 222 aa13.22□□□□□ -0.29
TRAF4-216ENST00000586813 NBEAP1P0C6P0 100 aa13.21□□□□□ -0.29
TRAF4-216ENST00000586813 CRYBA4P53673 196 aa13.21□□□□□ -0.29
TRAF4-216ENST00000586813 ERVFC1-1P60608 527 aa13.21□□□□□ -0.29
TRAF4-216ENST00000586813 SLAQ13239 276 aa13.21□□□□□ -0.29
TRAF4-216ENST00000586813 Q8TAT8 98 aa13.21□□□□□ -0.29
TRAF4-216ENST00000586813 FUSP35637 526 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAF4-216ENST00000586813 ZNF138P52744 262 aa13.2□□□□□ -0.3
TRAF4-216ENST00000586813 NHLH2Q02577 135 aa13.2□□□□□ -0.3
TRAF4-216ENST00000586813 ZNF415Q09FC8 603 aa13.2□□□□□ -0.3
TRAF4-216ENST00000586813 FHL2Q14192 279 aa13.2□□□□□ -0.3
TRAF4-216ENST00000586813 C8orf49Q96NF6 230 aa13.2□□□□□ -0.3
TRAF4-216ENST00000586813 OR51M1Q9H341 326 aa13.2□□□□□ -0.3
TRAF4-216ENST00000586813 PGPEP1Q9NXJ5 209 aa13.2□□□□□ -0.3
TRAF4-216ENST00000586813 HHLA3Q9XRX5 114 aa13.2□□□□□ -0.3
TRAF4-216ENST00000586813 TRBV7-9A0A0J9YWB2 115 aa13.19□□□□□ -0.3
TRAF4-216ENST00000586813 EREGO14944 169 aa13.19□□□□□ -0.3
TRAF4-216ENST00000586813 OR10J4P0C629 311 aa13.19□□□□□ -0.3
TRAF4-216ENST00000586813 MRPL23Q16540 153 aaKnown RBP13.19□□□□□ -0.3
TRAF4-216ENST00000586813 LYPD5Q6UWN5 251 aa13.19□□□□□ -0.3
TRAF4-216ENST00000586813 OR5C1Q8NGR4 320 aa13.19□□□□□ -0.3
TRAF4-216ENST00000586813 FXYD5Q96DB9 178 aa13.19□□□□□ -0.3
TRAF4-216ENST00000586813 PHYHIPLQ96FC7 376 aa13.19□□□□□ -0.3
TRAF4-216ENST00000586813 CCDC32Q9BV29 185 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms