RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 TMEM78Q5T7P6 136 aa9.97□□□□□ -0.81
PRKCSH-202ENST00000585540 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
PRKCSH-202ENST00000585540 EXOC3-AS1Q8N2X6 119 aa9.97□□□□□ -0.81
PRKCSH-202ENST00000585540 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
PRKCSH-202ENST00000585540 Q9H3A6 140 aa9.97□□□□□ -0.81
PRKCSH-202ENST00000585540 LENEPQ9Y5L5 61 aa9.97□□□□□ -0.81
PRKCSH-202ENST00000585540 NBEAL2Q6ZNJ1 2754 aa9.96□□□□□ -0.81
PRKCSH-202ENST00000585540 CTXND1A0A1B0GTU2 59 aa9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 RBMY1A1P0DJD3 496 aaKnown RBP9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 RBMY1CP0DJD4 496 aa9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 CRISP2P16562 243 aa9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 FHITP49789 147 aa9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 RBMY1FQ15415 496 aaKnown RBP9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 ZFAND6Q6FIF0 208 aa9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 CEMP1Q6PRD7 247 aaPredicted RBP9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 ZNF493Q6ZR52 646 aa9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 CMTM2Q8TAZ6 248 aa9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 SUN5Q8TC36 379 aa9.96□□□□□ -0.82
PRKCSH-202ENST00000585540 IGHV3OR16-12A0A075B7B8 117 aa9.95□□□□□ -0.82
PRKCSH-202ENST00000585540 LOC102723971A0A1B0GUV8 181 aa9.95□□□□□ -0.82
PRKCSH-202ENST00000585540 FBLL1A6NHQ2 334 aaKnown RBP9.95□□□□□ -0.82
PRKCSH-202ENST00000585540 UMAD1C9J7I0 102 aa9.95□□□□□ -0.82
PRKCSH-202ENST00000585540 SPART-AS1P0CW21 52 aa9.95□□□□□ -0.82
PRKCSH-202ENST00000585540 C16orf74Q96GX8 76 aa9.95□□□□□ -0.82
PRKCSH-202ENST00000585540 NIPSNAP3BQ9BS92 247 aa9.95□□□□□ -0.82
PRKCSH-202ENST00000585540 GCHFRP30047 84 aa9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 FGF8P55075 233 aaPredicted RBP9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 RANP62826 216 aaKnown RBP9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 SLC51BQ86UW2 128 aa9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 IQCF2Q8IXL9 164 aa9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 PHLDA1Q8WV24 401 aaPredicted RBP9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 FAM19A4Q96LR4 140 aa9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 PYGO2Q9BRQ0 406 aa9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 NKX6-2Q9C056 277 aaPredicted RBP9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 ZNF492Q9P255 531 aa9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
PRKCSH-202ENST00000585540 TRAV10A0A0B4J240 114 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 MAP1LC3B2A6NCE7 125 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 LYRM9A8MSI8 78 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 KLLNB2CW77 178 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 DIRC3C9JPN6 131 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 K7EQM0 130 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 PMS2P11Q13670 270 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 EIF5AL1Q6IS14 154 aaKnown RBP9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 DPPA3Q6W0C5 159 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 CCDC28AQ8IWP9 274 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 C5orf17Q8NAS9 161 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 FAM213BQ8TBF2 198 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 TMEM263Q8WUH6 116 aaKnown RBP9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 LINC01587Q99440 93 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 MAP1LC3BQ9GZQ8 125 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 TMPRSS5Q9H3S3 457 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 ARL2-SNX15V9GYD0 113 aa9.93□□□□□ -0.82
PRKCSH-202ENST00000585540 TRAV12-2A0A075B6T6 113 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 A0A1W2PRE2 83 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 C7orf71A4D174 169 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 CT45A10P0DMU9 189 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 ZNF138P52744 262 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 GFI1BQ5VTD9 330 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 C2CD4CQ8TF44 421 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 FAM210BQ96KR6 192 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 TCEAL7Q9BRU2 100 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 AGPAT4-IT1Q9H0P7 198 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 DKK2Q9UBU2 259 aa9.92□□□□□ -0.82
PRKCSH-202ENST00000585540 DNAH7Q8WXX0 4024 aa9.91□□□□□ -0.82
PRKCSH-202ENST00000585540 IGKV2-40A0A087WW87 121 aaPredicted RBP9.91□□□□□ -0.82
PRKCSH-202ENST00000585540 PGPA6NDG6 321 aa9.91□□□□□ -0.82
PRKCSH-202ENST00000585540 DEFB4AO15263 64 aa9.91□□□□□ -0.82
PRKCSH-202ENST00000585540 IGKV2D-40P01614 121 aaPredicted RBP9.91□□□□□ -0.82
PRKCSH-202ENST00000585540 NANOS2P60321 138 aaKnown RBP9.91□□□□□ -0.82
PRKCSH-202ENST00000585540 ZNF680Q8NEM1 530 aa9.91□□□□□ -0.82
PRKCSH-202ENST00000585540 LCE6AA0A183 80 aa9.9□□□□□ -0.82
PRKCSH-202ENST00000585540 A0A1B0GV50 99 aa9.9□□□□□ -0.82
PRKCSH-202ENST00000585540 ERCC8Q13216 396 aa9.9□□□□□ -0.82
PRKCSH-202ENST00000585540 NDFIP1Q9BT67 221 aa9.9□□□□□ -0.82
PRKCSH-202ENST00000585540 RPH3ALQ9UNE2 315 aa9.9□□□□□ -0.82
PRKCSH-202ENST00000585540 YTHDF2Q9Y5A9 579 aaKnown RBP9.9□□□□□ -0.82
PRKCSH-202ENST00000585540 GPX1P07203 203 aa9.89□□□□□ -0.83
PRKCSH-202ENST00000585540 SULT1A2P50226 295 aa9.89□□□□□ -0.83
PRKCSH-202ENST00000585540 RAB5CP51148 216 aa9.89□□□□□ -0.83
PRKCSH-202ENST00000585540 GNG5P63218 68 aa9.89□□□□□ -0.83
PRKCSH-202ENST00000585540 ANXA2RQ3ZCQ2 193 aa9.89□□□□□ -0.83
PRKCSH-202ENST00000585540 FAM222AQ5U5X8 452 aa9.89□□□□□ -0.83
PRKCSH-202ENST00000585540 RNASE8Q8TDE3 154 aaKnown RBP9.89□□□□□ -0.83
PRKCSH-202ENST00000585540 TIMM8BQ9Y5J9 83 aaPredicted RBP9.89□□□□□ -0.83
PRKCSH-202ENST00000585540 GGTLC3B5MD39 225 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 PPT1P50897 306 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 UBE2G2P60604 165 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 KIR3DS1Q14943 382 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 C12orf74Q32Q52 190 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 IBA57Q5T440 356 aaKnown RBP9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 Q6ZTC4 211 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 ZFAND2AQ8N6M9 145 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 SFT2D1Q8WV19 159 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 MBD3L1Q8WWY6 194 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 VGLL1Q99990 258 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 CELA1Q9UNI1 258 aa9.88□□□□□ -0.83
PRKCSH-202ENST00000585540 DEFB131BA0A096LNP1 70 aa9.87□□□□□ -0.83
PRKCSH-202ENST00000585540 TRAV12-3A0A0B4J271 114 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms