RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 BTN1A1Q13410 526 aa14.2□□□□□ -0.14
TOP3A-219ENST00000584887 CHAC2Q8WUX2 184 aa14.2□□□□□ -0.14
TOP3A-219ENST00000584887 AAMDCQ9H7C9 122 aa14.2□□□□□ -0.14
TOP3A-219ENST00000584887 IGKV2-40A0A087WW87 121 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-219ENST00000584887 IGKV2D-40P01614 121 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-219ENST00000584887 NHLH2Q02577 135 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 CD300CQ08708 224 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 DAZ2Q13117 558 aaKnown RBP14.19□□□□□ -0.14
TOP3A-219ENST00000584887 PDE6HQ13956 83 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 ICAM4Q14773 271 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 LRRC37A5PQ49AS3 106 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 FAM122CQ6P4D5 195 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 ZNF680Q8NEM1 530 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 ENKURQ8TC29 256 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 SLC25A2Q9BXI2 301 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 AGPAT4-IT1Q9H0P7 198 aa14.19□□□□□ -0.14
TOP3A-219ENST00000584887 DYNC1H1Q14204 4646 aaKnown RBP14.18□□□□□ -0.14
TOP3A-219ENST00000584887 TRGV1A0A0A0MS02 117 aa14.18□□□□□ -0.14
TOP3A-219ENST00000584887 ASAH1Q13510 395 aa14.18□□□□□ -0.14
TOP3A-219ENST00000584887 TTC32Q5I0X7 151 aa14.18□□□□□ -0.14
TOP3A-219ENST00000584887 MIR17HGQ75NE6 70 aa14.18□□□□□ -0.14
TOP3A-219ENST00000584887 OR5C1Q8NGR4 320 aa14.18□□□□□ -0.14
TOP3A-219ENST00000584887 ZNF503Q96F45 646 aa14.18□□□□□ -0.14
TOP3A-219ENST00000584887 LINC00477Q96M19 166 aa14.18□□□□□ -0.14
TOP3A-219ENST00000584887 SLC25A31Q9H0C2 315 aa14.18□□□□□ -0.14
TOP3A-219ENST00000584887 KLLNB2CW77 178 aa14.17□□□□□ -0.14
TOP3A-219ENST00000584887 GPX1P07203 203 aa14.17□□□□□ -0.14
TOP3A-219ENST00000584887 ESRGQ1W209 222 aa14.17□□□□□ -0.14
TOP3A-219ENST00000584887 TMEM78Q5T7P6 136 aa14.16□□□□□ -0.14
TOP3A-219ENST00000584887 EIF4E3Q8N5X7 224 aaKnown RBP14.16□□□□□ -0.14
TOP3A-219ENST00000584887 C11orf72Q8NBR9 251 aa14.16□□□□□ -0.14
TOP3A-219ENST00000584887 S100ZQ8WXG8 99 aa14.16□□□□□ -0.14
TOP3A-219ENST00000584887 OR5AC2Q9NZP5 309 aa14.16□□□□□ -0.14
TOP3A-219ENST00000584887 FUT9Q9Y231 359 aa14.16□□□□□ -0.14
TOP3A-219ENST00000584887 PKD1P98161 4303 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 E5RGE8 158 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 RGS13O14921 159 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 OR10J4P0C629 311 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 FAM167A-AS1Q96KT0 104 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 FAM19A4Q96LR4 140 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 VGLL1Q99990 258 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 KRTAP1-5Q9BYS1 174 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 KCNIP2Q9NS61 270 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 MRPS16Q9Y3D3 137 aaKnown RBP14.15□□□□□ -0.14
TOP3A-219ENST00000584887 KLF12Q9Y4X4 402 aa14.15□□□□□ -0.14
TOP3A-219ENST00000584887 H3BNG1 76 aa14.14□□□□□ -0.15
TOP3A-219ENST00000584887 ZNF324O75467 553 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-219ENST00000584887 NBEAP1P0C6P0 100 aa14.14□□□□□ -0.15
TOP3A-219ENST00000584887 C9orf47Q6ZRZ4 202 aa14.14□□□□□ -0.15
TOP3A-219ENST00000584887 PAXXQ9BUH6 204 aa14.14□□□□□ -0.15
TOP3A-219ENST00000584887 OR51M1Q9H341 326 aa14.14□□□□□ -0.15
TOP3A-219ENST00000584887 IGHV3-53P01767 116 aa14.13□□□□□ -0.15
TOP3A-219ENST00000584887 CRISP2P16562 243 aa14.13□□□□□ -0.15
TOP3A-219ENST00000584887 ANXA2RQ3ZCQ2 193 aa14.13□□□□□ -0.15
TOP3A-219ENST00000584887 PRR9Q5T870 116 aa14.13□□□□□ -0.15
TOP3A-219ENST00000584887 VSIG2Q96IQ7 327 aa14.13□□□□□ -0.15
TOP3A-219ENST00000584887 ARPC5LQ9BPX5 153 aa14.13□□□□□ -0.15
TOP3A-219ENST00000584887 LINC00467Q9BRT7 94 aa14.13□□□□□ -0.15
TOP3A-219ENST00000584887 UPK3BQ9BT76 320 aa14.13□□□□□ -0.15
TOP3A-219ENST00000584887 Q9H3A6 140 aa14.13□□□□□ -0.15
TOP3A-219ENST00000584887 OR7C2O60412 319 aa14.12□□□□□ -0.15
TOP3A-219ENST00000584887 TCL1AP56279 114 aa14.12□□□□□ -0.15
TOP3A-219ENST00000584887 ZFAND2AQ8N6M9 145 aa14.12□□□□□ -0.15
TOP3A-219ENST00000584887 Q8TAT8 98 aa14.12□□□□□ -0.15
TOP3A-219ENST00000584887 PHYHIPLQ96FC7 376 aa14.12□□□□□ -0.15
TOP3A-219ENST00000584887 MRPL32Q9BYC8 188 aaKnown RBP14.12□□□□□ -0.15
TOP3A-219ENST00000584887 NMES1Q9C002 83 aa14.12□□□□□ -0.15
TOP3A-219ENST00000584887 MRPL16Q9NX20 251 aaKnown RBP14.12□□□□□ -0.15
TOP3A-219ENST00000584887 TP53TG3Q9ULZ0 132 aa14.12□□□□□ -0.15
TOP3A-219ENST00000584887 A0A096LPF7 62 aa14.11□□□□□ -0.15
TOP3A-219ENST00000584887 H0YIZ8 118 aa14.11□□□□□ -0.15
TOP3A-219ENST00000584887 Q6ZQT7 251 aa14.11□□□□□ -0.15
TOP3A-219ENST00000584887 SPATA12Q7Z6I5 190 aa14.11□□□□□ -0.15
TOP3A-219ENST00000584887 FXYD5Q96DB9 178 aa14.11□□□□□ -0.15
TOP3A-219ENST00000584887 WDR61Q9GZS3 305 aaKnown RBP14.11□□□□□ -0.15
TOP3A-219ENST00000584887 ZNF492Q9P255 531 aa14.11□□□□□ -0.15
TOP3A-219ENST00000584887 IGHV1OR15-1A0A075B7D0 117 aa14.1□□□□□ -0.15
TOP3A-219ENST00000584887 C17orf112F2Z3M2 114 aa14.1□□□□□ -0.15
TOP3A-219ENST00000584887 SPINK4O60575 86 aa14.1□□□□□ -0.15
TOP3A-219ENST00000584887 UPK1BO75841 260 aa14.1□□□□□ -0.15
TOP3A-219ENST00000584887 ZNF138P52744 262 aa14.1□□□□□ -0.15
TOP3A-219ENST00000584887 LINC00299Q6ZSB3 139 aa14.1□□□□□ -0.15
TOP3A-219ENST00000584887 KRTAP4-5Q9BYR2 181 aa14.1□□□□□ -0.15
TOP3A-219ENST00000584887 INMT-MINDY4F8WBC2 141 aa14.09□□□□□ -0.15
TOP3A-219ENST00000584887 PAX4O43316 350 aa14.09□□□□□ -0.15
TOP3A-219ENST00000584887 NMBP08949 121 aa14.09□□□□□ -0.15
TOP3A-219ENST00000584887 CSN1S1P47710 185 aa14.09□□□□□ -0.15
TOP3A-219ENST00000584887 CYCSP99999 105 aaKnown RBP14.09□□□□□ -0.15
TOP3A-219ENST00000584887 C18orf15Q96N68 181 aa14.09□□□□□ -0.15
TOP3A-219ENST00000584887 A0A1W2PPQ1 181 aa14.08□□□□□ -0.16
TOP3A-219ENST00000584887 PRAF2O60831 178 aa14.08□□□□□ -0.16
TOP3A-219ENST00000584887 RANP62826 216 aaKnown RBP14.08□□□□□ -0.16
TOP3A-219ENST00000584887 UBE2L3P68036 154 aaKnown RBP14.08□□□□□ -0.16
TOP3A-219ENST00000584887 FFAR4Q5NUL3 377 aa14.08□□□□□ -0.16
TOP3A-219ENST00000584887 MUC21Q5SSG8 566 aa14.08□□□□□ -0.16
TOP3A-219ENST00000584887 IBA57Q5T440 356 aaKnown RBP14.08□□□□□ -0.16
TOP3A-219ENST00000584887 ST6GAL2Q96JF0 529 aa14.08□□□□□ -0.16
TOP3A-219ENST00000584887 ATP5SQ99766 215 aa14.08□□□□□ -0.16
TOP3A-219ENST00000584887 ICOSQ9Y6W8 199 aa14.08□□□□□ -0.16
TOP3A-219ENST00000584887 ZNF415Q09FC8 603 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 229.4 ms