RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CITED1Q99966 193 aa10.5□□□□□ -0.73
UBBP4-202ENST00000584755 V9GYV3 84 aa10.5□□□□□ -0.73
UBBP4-202ENST00000584755 C19orf71A6NCJ1 209 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 COLCA2A8K830 154 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 PFN1P07737 140 aaKnown RBP10.49□□□□□ -0.73
UBBP4-202ENST00000584755 ERVFC1-1P60608 527 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 ELOBQ15370 118 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 GBGT1Q8N5D6 347 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 ZNF738Q8NE65 137 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 IMMP2LQ96T52 175 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 AGPAT4-IT1Q9H0P7 198 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 TRAV25A0A0B4J276 109 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 NPIPB6E9PJ23 425 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 PAFAH1B2P68402 229 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 ERCC8Q13216 396 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 IBA57Q5T440 356 aaKnown RBP10.49□□□□□ -0.73
UBBP4-202ENST00000584755 LINC00322Q6ZN03 302 aaPredicted RBP10.49□□□□□ -0.73
UBBP4-202ENST00000584755 TMEM61Q8N0U2 210 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 FAM24BQ8N5W8 94 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 DYNLRB2Q8TF09 96 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 ZC2HC1AQ96GY0 325 aa10.49□□□□□ -0.73
UBBP4-202ENST00000584755 RNASE7Q9H1E1 156 aaKnown RBP10.49□□□□□ -0.73
UBBP4-202ENST00000584755 ZNF138P52744 262 aa10.48□□□□□ -0.73
UBBP4-202ENST00000584755 WFDC3Q8IUB2 231 aa10.48□□□□□ -0.73
UBBP4-202ENST00000584755 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
UBBP4-202ENST00000584755 OR8A1Q8NGG7 326 aa10.48□□□□□ -0.73
UBBP4-202ENST00000584755 Q8TAT8 98 aa10.48□□□□□ -0.73
UBBP4-202ENST00000584755 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
UBBP4-202ENST00000584755 LINC00477Q96M19 166 aa10.48□□□□□ -0.73
UBBP4-202ENST00000584755 LENEPQ9Y5L5 61 aa10.48□□□□□ -0.73
UBBP4-202ENST00000584755 CRIP1P50238 77 aa10.47□□□□□ -0.73
UBBP4-202ENST00000584755 SNRPD3P62318 126 aaKnown RBP10.47□□□□□ -0.73
UBBP4-202ENST00000584755 KRTAP24-1Q3LI83 254 aa10.47□□□□□ -0.73
UBBP4-202ENST00000584755 CD300EQ496F6 205 aaPredicted RBP10.47□□□□□ -0.73
UBBP4-202ENST00000584755 TMEM78Q5T7P6 136 aa10.47□□□□□ -0.73
UBBP4-202ENST00000584755 RBPMS2Q6ZRY4 209 aaKnown RBP10.47□□□□□ -0.73
UBBP4-202ENST00000584755 LINC00482Q8N8I6 264 aa10.47□□□□□ -0.73
UBBP4-202ENST00000584755 C8orf49Q96NF6 230 aa10.47□□□□□ -0.73
UBBP4-202ENST00000584755 ASCL2Q99929 193 aa10.47□□□□□ -0.73
UBBP4-202ENST00000584755 PYGO2Q9BRQ0 406 aa10.47□□□□□ -0.73
UBBP4-202ENST00000584755 GPR61Q9BZJ8 451 aa10.47□□□□□ -0.73
UBBP4-202ENST00000584755 TENM1Q9UKZ4 2725 aa10.47□□□□□ -0.73
UBBP4-202ENST00000584755 TRBV24-1A0A075B6N3 115 aa10.46□□□□□ -0.74
UBBP4-202ENST00000584755 TFPI2P48307 235 aa10.46□□□□□ -0.74
UBBP4-202ENST00000584755 CTAG1AP78358 180 aa10.46□□□□□ -0.74
UBBP4-202ENST00000584755 CT83Q5H943 113 aa10.46□□□□□ -0.74
UBBP4-202ENST00000584755 PRR27Q6MZM9 219 aa10.46□□□□□ -0.74
UBBP4-202ENST00000584755 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.46□□□□□ -0.74
UBBP4-202ENST00000584755 OR10J6PQ8NGY7 276 aa10.46□□□□□ -0.74
UBBP4-202ENST00000584755 SPAG8Q99932 426 aaPredicted RBP10.46□□□□□ -0.74
UBBP4-202ENST00000584755 NDFIP1Q9BT67 221 aa10.46□□□□□ -0.74
UBBP4-202ENST00000584755 IL36BQ9NZH7 164 aa10.46□□□□□ -0.74
UBBP4-202ENST00000584755 URGCP-MRPS24S4R325 110 aa10.46□□□□□ -0.74
UBBP4-202ENST00000584755 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
UBBP4-202ENST00000584755 GATCO43716 136 aaKnown RBP10.45□□□□□ -0.74
UBBP4-202ENST00000584755 ZNF688P0C7X2 276 aa10.45□□□□□ -0.74
UBBP4-202ENST00000584755 PRIMA1Q86XR5 153 aa10.45□□□□□ -0.74
UBBP4-202ENST00000584755 OR4B1Q8NGF8 309 aa10.45□□□□□ -0.74
UBBP4-202ENST00000584755 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
UBBP4-202ENST00000584755 ZNF256Q9Y2P7 627 aaPredicted RBP10.45□□□□□ -0.74
UBBP4-202ENST00000584755 WNK1Q9H4A3 2382 aa10.45□□□□□ -0.74
UBBP4-202ENST00000584755 ATRQ13535 2644 aa10.45□□□□□ -0.74
UBBP4-202ENST00000584755 LOC105371267A0A1B0GV96 52 aa10.44□□□□□ -0.74
UBBP4-202ENST00000584755 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
UBBP4-202ENST00000584755 ZNF705GA8MUZ8 300 aaPredicted RBP10.44□□□□□ -0.74
UBBP4-202ENST00000584755 IGLV1-51P01701 117 aa10.44□□□□□ -0.74
UBBP4-202ENST00000584755 CT45A10P0DMU9 189 aa10.44□□□□□ -0.74
UBBP4-202ENST00000584755 S100PP25815 95 aa10.44□□□□□ -0.74
UBBP4-202ENST00000584755 DEFB1P60022 68 aa10.44□□□□□ -0.74
UBBP4-202ENST00000584755 PSMG4Q5JS54 123 aa10.44□□□□□ -0.74
UBBP4-202ENST00000584755 KCNIP4Q6PIL6 250 aa10.44□□□□□ -0.74
UBBP4-202ENST00000584755 OR2K2Q8NGT1 345 aa10.44□□□□□ -0.74
UBBP4-202ENST00000584755 TRAV9-1A0A075B6T8 112 aa10.43□□□□□ -0.74
UBBP4-202ENST00000584755 A0A0J9YX75 114 aa10.43□□□□□ -0.74
UBBP4-202ENST00000584755 OR4C46A6NHA9 309 aa10.43□□□□□ -0.74
UBBP4-202ENST00000584755 F6UB75 175 aa10.43□□□□□ -0.74
UBBP4-202ENST00000584755 P01737 135 aa10.43□□□□□ -0.74
UBBP4-202ENST00000584755 PF4P02776 101 aa10.43□□□□□ -0.74
UBBP4-202ENST00000584755 CXCL1P09341 107 aa10.43□□□□□ -0.74
UBBP4-202ENST00000584755 ZNF705DP0CH99 300 aaPredicted RBP10.43□□□□□ -0.74
UBBP4-202ENST00000584755 ZNF705BP0CI00 300 aaPredicted RBP10.43□□□□□ -0.74
UBBP4-202ENST00000584755 HIST1H1AQ02539 215 aaPredicted RBP10.43□□□□□ -0.74
UBBP4-202ENST00000584755 APRG1Q8IVJ8 170 aa10.43□□□□□ -0.74
UBBP4-202ENST00000584755 DAZAP1Q96EP5 407 aaKnown RBP10.43□□□□□ -0.74
UBBP4-202ENST00000584755 RPP21Q9H633 154 aaKnown RBP10.43□□□□□ -0.74
UBBP4-202ENST00000584755 TGIF2-C20orf24A0A0A6YYL0 155 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 IZUMO1RA6ND01 250 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 SAP30O75446 220 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 ZNF80P51504 273 aaPredicted RBP10.42□□□□□ -0.74
UBBP4-202ENST00000584755 FAM162BQ5T6X4 162 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 FOXI2Q6ZQN5 318 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 TSKUQ8WUA8 353 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 ODF3Q96PU9 254 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 SAV1Q9H4B6 383 aaPredicted RBP10.42□□□□□ -0.74
UBBP4-202ENST00000584755 ZMAT5Q9UDW3 170 aaKnown RBP10.42□□□□□ -0.74
UBBP4-202ENST00000584755 A8MTW9 85 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 SH2D1AO60880 128 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 CRISP2P16562 243 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 RAB5AP20339 215 aa10.42□□□□□ -0.74
UBBP4-202ENST00000584755 FAM3BP58499 235 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms