RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 MEOX2P50222 304 aa14.87□□□□□ -0.03
SRSF1-206ENST00000583741 RPL11P62913 178 aaKnown RBP14.87□□□□□ -0.03
SRSF1-206ENST00000583741 TXNDC17Q9BRA2 123 aa14.87□□□□□ -0.03
SRSF1-206ENST00000583741 NKX6-2Q9C056 277 aaPredicted RBP14.87□□□□□ -0.03
SRSF1-206ENST00000583741 SMDT1Q9H4I9 107 aa14.87□□□□□ -0.03
SRSF1-206ENST00000583741 TREM1Q9NP99 234 aa14.87□□□□□ -0.03
SRSF1-206ENST00000583741 ZNF253O75346 499 aa14.86□□□□□ -0.03
SRSF1-206ENST00000583741 NDUFB4O95168 129 aa14.86□□□□□ -0.03
SRSF1-206ENST00000583741 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.86□□□□□ -0.03
SRSF1-206ENST00000583741 ABCA13Q86UQ4 5058 aa14.86□□□□□ -0.03
SRSF1-206ENST00000583741 AGRNO00468 2067 aa14.86□□□□□ -0.03
SRSF1-206ENST00000583741 GGTLC3B5MD39 225 aa14.85□□□□□ -0.03
SRSF1-206ENST00000583741 PSG9Q00887 426 aa14.85□□□□□ -0.03
SRSF1-206ENST00000583741 LYPD1Q8N2G4 141 aa14.85□□□□□ -0.03
SRSF1-206ENST00000583741 Q8NAQ8 132 aa14.85□□□□□ -0.03
SRSF1-206ENST00000583741 Q9H3A6 140 aa14.85□□□□□ -0.03
SRSF1-206ENST00000583741 NRN1Q9NPD7 142 aa14.85□□□□□ -0.03
SRSF1-206ENST00000583741 DYNC1H1Q14204 4646 aaKnown RBP14.85□□□□□ -0.03
SRSF1-206ENST00000583741 SUMO1P63165 101 aaKnown RBP14.84□□□□□ -0.03
SRSF1-206ENST00000583741 FAM24BQ8N5W8 94 aa14.84□□□□□ -0.03
SRSF1-206ENST00000583741 SLC50A1Q9BRV3 221 aa14.84□□□□□ -0.03
SRSF1-206ENST00000583741 AAMDCQ9H7C9 122 aa14.84□□□□□ -0.03
SRSF1-206ENST00000583741 OTORQ9NRC9 128 aa14.84□□□□□ -0.03
SRSF1-206ENST00000583741 CCDC28AQ8IWP9 274 aa14.83□□□□□ -0.03
SRSF1-206ENST00000583741 ZNF331Q9NQX6 463 aaPredicted RBP14.83□□□□□ -0.03
SRSF1-206ENST00000583741 DNAH11Q96DT5 4516 aa14.83□□□□□ -0.04
SRSF1-206ENST00000583741 PGPA6NDG6 321 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 C9JQL5 133 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 PDE6DO43924 150 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 DEFB131AP59861 70 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 EXOC3-AS1Q8N2X6 119 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 MS4A6AQ9H2W1 248 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 PKD1P98161 4303 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 F6UZH7 168 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 SRP19P09132 144 aaKnown RBP14.82□□□□□ -0.04
SRSF1-206ENST00000583741 GIG44P09565 113 aaPredicted RBP14.82□□□□□ -0.04
SRSF1-206ENST00000583741 RBMY1A1P0DJD3 496 aaKnown RBP14.82□□□□□ -0.04
SRSF1-206ENST00000583741 RBMY1CP0DJD4 496 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 PAFAH1B2P68402 229 aa14.82□□□□□ -0.04
SRSF1-206ENST00000583741 RBMY1FQ15415 496 aaKnown RBP14.82□□□□□ -0.04
SRSF1-206ENST00000583741 IGHV4-28A0A0C4DH34 117 aa14.81□□□□□ -0.04
SRSF1-206ENST00000583741 NDUFS6O75380 124 aaKnown RBP14.81□□□□□ -0.04
SRSF1-206ENST00000583741 SLC25A5P05141 298 aaKnown RBP14.81□□□□□ -0.04
SRSF1-206ENST00000583741 C5orf17Q8NAS9 161 aa14.81□□□□□ -0.04
SRSF1-206ENST00000583741 C16orf92Q96LL3 132 aa14.81□□□□□ -0.04
SRSF1-206ENST00000583741 SLC35B3Q9H1N7 401 aa14.81□□□□□ -0.04
SRSF1-206ENST00000583741 A0A1B0GVY2 172 aa14.8□□□□□ -0.04
SRSF1-206ENST00000583741 TMEM250H0YL14 139 aa14.8□□□□□ -0.04
SRSF1-206ENST00000583741 SAMD13Q5VXD3 122 aa14.8□□□□□ -0.04
SRSF1-206ENST00000583741 CYB561D1Q8N8Q1 229 aa14.8□□□□□ -0.04
SRSF1-206ENST00000583741 CMTM2Q8TAZ6 248 aa14.8□□□□□ -0.04
SRSF1-206ENST00000583741 TCEAL7Q9BRU2 100 aa14.8□□□□□ -0.04
SRSF1-206ENST00000583741 SCO2A0A1W2PP80 73 aa14.79□□□□□ -0.04
SRSF1-206ENST00000583741 DNASE2O00115 360 aaPredicted RBP14.79□□□□□ -0.04
SRSF1-206ENST00000583741 SOCS3O14543 225 aa14.79□□□□□ -0.04
SRSF1-206ENST00000583741 SFTA3P0C7M3 94 aa14.79□□□□□ -0.04
SRSF1-206ENST00000583741 HLA-DMBP28068 263 aa14.79□□□□□ -0.04
SRSF1-206ENST00000583741 CEBPGP53567 150 aa14.79□□□□□ -0.04
SRSF1-206ENST00000583741 IGFL4Q6B9Z1 124 aa14.79□□□□□ -0.04
SRSF1-206ENST00000583741 Q6ZTC4 211 aa14.79□□□□□ -0.04
SRSF1-206ENST00000583741 DCANP1Q8TF63 244 aa14.79□□□□□ -0.04
SRSF1-206ENST00000583741 TRAV8-2A0A0B4J237 113 aa14.78□□□□□ -0.04
SRSF1-206ENST00000583741 ISLRO14498 428 aa14.78□□□□□ -0.04
SRSF1-206ENST00000583741 STHQ8IWL8 128 aa14.78□□□□□ -0.04
SRSF1-206ENST00000583741 RNF182Q8N6D2 247 aa14.78□□□□□ -0.04
SRSF1-206ENST00000583741 C11orf52Q96A22 123 aa14.78□□□□□ -0.04
SRSF1-206ENST00000583741 CLEC5AQ9NY25 188 aa14.78□□□□□ -0.04
SRSF1-206ENST00000583741 RPH3ALQ9UNE2 315 aa14.78□□□□□ -0.04
SRSF1-206ENST00000583741 MUC4Q99102 2169 aa14.78□□□□□ -0.04
SRSF1-206ENST00000583741 IGHV4-4A0A075B6R2 117 aa14.77□□□□□ -0.04
SRSF1-206ENST00000583741 TRAV2A0A0B4J234 112 aa14.77□□□□□ -0.04
SRSF1-206ENST00000583741 TMEM218A2RU14 115 aa14.77□□□□□ -0.04
SRSF1-206ENST00000583741 M0R3E3 92 aa14.77□□□□□ -0.04
SRSF1-206ENST00000583741 GNG5P63218 68 aa14.77□□□□□ -0.04
SRSF1-206ENST00000583741 LINC00336Q6ZUF6 198 aa14.77□□□□□ -0.04
SRSF1-206ENST00000583741 EPDR1Q9UM22 224 aa14.77□□□□□ -0.04
SRSF1-206ENST00000583741 K7EQG2 157 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 PEX7O00628 323 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 ID1P41134 155 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 CSN1S1P47710 185 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 TRPT1Q86TN4 253 aaKnown RBP14.76□□□□□ -0.05
SRSF1-206ENST00000583741 HIST1H2BAQ96A08 127 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 PRELID1Q9Y255 219 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 X6R8D5 127 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 TRAV10A0A0B4J240 114 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 ATP6V1G1O75348 118 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 TCRAP04437 139 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 MIFP14174 115 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 RPUSD4Q96CM3 377 aaKnown RBP14.76□□□□□ -0.05
SRSF1-206ENST00000583741 ATG101Q9BSB4 218 aa14.76□□□□□ -0.05
SRSF1-206ENST00000583741 PSG3Q16557 428 aa14.75□□□□□ -0.05
SRSF1-206ENST00000583741 SOHLH1Q5JUK2 328 aa14.75□□□□□ -0.05
SRSF1-206ENST00000583741 ARL6IP6Q8N6S5 226 aa14.75□□□□□ -0.05
SRSF1-206ENST00000583741 MRPL53Q96EL3 112 aaKnown RBP14.75□□□□□ -0.05
SRSF1-206ENST00000583741 AKR1C3P42330 323 aa14.74□□□□□ -0.05
SRSF1-206ENST00000583741 C20orf173Q96LM9 149 aa14.74□□□□□ -0.05
SRSF1-206ENST00000583741 PARLQ9H300 379 aa14.74□□□□□ -0.05
SRSF1-206ENST00000583741 KNCNA6PVL3 124 aa14.73□□□□□ -0.05
SRSF1-206ENST00000583741 ZNF705FA8MVS1 300 aaPredicted RBP14.73□□□□□ -0.05
SRSF1-206ENST00000583741 KRBOX1C9JBD0 128 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms