RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 WFDC10AQ9H1F0 79 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 TMPRSS5Q9H3S3 457 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 ZNF492Q9P255 531 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 VAX2Q9UIW0 290 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 KLF12Q9Y4X4 402 aa6.84□□□□□ -1.31
UBBP4-201ENST00000583708 GGTLC3B5MD39 225 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 PRAC2D3DTV9 90 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 PAGE4O60829 102 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 CA1P00915 261 aaPredicted RBP6.83□□□□□ -1.32
UBBP4-201ENST00000583708 SNRPCP09234 159 aaKnown RBP6.83□□□□□ -1.32
UBBP4-201ENST00000583708 RPL35AP18077 110 aaKnown RBP6.83□□□□□ -1.32
UBBP4-201ENST00000583708 HLA-DMBP28068 263 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 ZNF124Q15973 351 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 GDF5OSQ5U4N7 250 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 RNF183Q96D59 192 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 FMC1Q96HJ9 113 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 FAM19A4Q96LR4 140 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 RCHY1Q96PM5 261 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 NEU1Q99519 415 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 AGPAT4-IT1Q9H0P7 198 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 GNG13Q9P2W3 67 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 ZFP30Q9Y2G7 519 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 GOLT1BQ9Y3E0 138 aa6.83□□□□□ -1.32
UBBP4-201ENST00000583708 YTHDF2Q9Y5A9 579 aaKnown RBP6.83□□□□□ -1.32
UBBP4-201ENST00000583708 C11orf94C9JXX5 98 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 F6UB75 175 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 PEX7O00628 323 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 SPRY2O43597 315 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 CT45A10P0DMU9 189 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 BCL2P10415 239 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 UBE2G2P60604 165 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 MEF2BQ02080 365 aaPredicted RBP6.82□□□□□ -1.32
UBBP4-201ENST00000583708 GOLT1AQ6ZVE7 132 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 COX8CQ7Z4L0 72 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 SBSPONQ8IVN8 264 aa6.82□□□□□ -1.32
UBBP4-201ENST00000583708 KLLNB2CW77 178 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 TMEM250H0YL14 139 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 EIF3GO75821 320 aaKnown RBP eCLIP6.81□□□□□ -1.32
UBBP4-201ENST00000583708 INSP01308 110 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 GIG44P09565 113 aaPredicted RBP6.81□□□□□ -1.32
UBBP4-201ENST00000583708 TAS2R60P59551 318 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 CCL20P78556 96 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 FLI1Q01543 452 aaPredicted RBP6.81□□□□□ -1.32
UBBP4-201ENST00000583708 TMEM183BQ1AE95 376 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 CSNK1G2-AS1Q8NCQ2 148 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 C11orf52Q96A22 123 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 SMIM12Q96EX1 92 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 LINC00467Q9BRT7 94 aa6.81□□□□□ -1.32
UBBP4-201ENST00000583708 IGKV2-40A0A087WW87 121 aaPredicted RBP6.8□□□□□ -1.32
UBBP4-201ENST00000583708 TMEM189A5PLL7 270 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 RBFOX3A6NFN3 312 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 H7BYZ3 331 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 IGKV2D-40P01614 121 aaPredicted RBP6.8□□□□□ -1.32
UBBP4-201ENST00000583708 GPX1P07203 203 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 MIFP14174 115 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 UBE2G1P62253 170 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 ZNF506Q5JVG8 444 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 CLLU1Q5K131 121 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 ZNF705AQ6ZN79 300 aaPredicted RBP6.8□□□□□ -1.32
UBBP4-201ENST00000583708 FAM210AQ96ND0 272 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 VGLL1Q99990 258 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 PYGO2Q9BRQ0 406 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 NIPSNAP3BQ9BS92 247 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 SLC35B3Q9H1N7 401 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 BIN3Q9NQY0 253 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 XCL2Q9UBD3 114 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 PSG8Q9UQ74 426 aa6.8□□□□□ -1.32
UBBP4-201ENST00000583708 NBEAL2Q6ZNJ1 2754 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 LOC102723971A0A1B0GUV8 181 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 C7orf71A4D174 169 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 IGKV3-20P01619 116 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 ZNF705DP0CH99 300 aaPredicted RBP6.79□□□□□ -1.32
UBBP4-201ENST00000583708 ZNF705BP0CI00 300 aaPredicted RBP6.79□□□□□ -1.32
UBBP4-201ENST00000583708 AKR1C3P42330 323 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 DEFB1P60022 68 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 ERCC8Q13216 396 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 PEA15Q15121 130 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 SMUG1Q53HV7 270 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 ZNF493Q6ZR52 646 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 C2CD4CQ8TF44 421 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 ASCL2Q99929 193 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 RARRES2Q99969 163 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 OVOL2Q9BRP0 275 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 TREM1Q9NP99 234 aa6.79□□□□□ -1.32
UBBP4-201ENST00000583708 TRAV21A0A0B4J279 112 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 TEX48A0A1B0GUV7 120 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 A0A1B0GV50 99 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 RAB19A4D1S5 217 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 CRXO43186 299 aaPredicted RBP6.78□□□□□ -1.32
UBBP4-201ENST00000583708 IGLV2-11P01706 119 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 ATP5G3P48201 142 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 SPINK13Q1W4C9 94 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 FAM74A3Q4VXF1 159 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 Q6AWC8 147 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 ZFAND2AQ8N6M9 145 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 OR11H2Q8NH07 326 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 KCNS1Q96KK3 526 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 TMEM208Q9BTX3 173 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 EIF5A2Q9GZV4 153 aaKnown RBP6.78□□□□□ -1.32
UBBP4-201ENST00000583708 MED9Q9NWA0 146 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 232.1 ms