RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 M0R3E3 92 aa7.55□□□□□ -1.2
TOP3A-212ENST00000582122 GCHFRP30047 84 aa7.55□□□□□ -1.2
TOP3A-212ENST00000582122 RAB5CP51148 216 aa7.55□□□□□ -1.2
TOP3A-212ENST00000582122 FXYD7P58549 80 aa7.55□□□□□ -1.2
TOP3A-212ENST00000582122 TAS2R60P59551 318 aa7.55□□□□□ -1.2
TOP3A-212ENST00000582122 LGALSLQ3ZCW2 172 aaPredicted RBP7.55□□□□□ -1.2
TOP3A-212ENST00000582122 C11orf45Q8TAV5 145 aa7.55□□□□□ -1.2
TOP3A-212ENST00000582122 PHYHIPLQ96FC7 376 aa7.55□□□□□ -1.2
TOP3A-212ENST00000582122 IGHV3OR16-12A0A075B7B8 117 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 A0A1W2PRE2 83 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 PGPA6NDG6 321 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 C11orf94C9JXX5 98 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 TEX46H3BTG2 121 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 CRISP2P16562 243 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 ZNF493Q6ZR52 646 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 CCDC28AQ8IWP9 274 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 C5orf17Q8NAS9 161 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 TCEAL7Q9BRU2 100 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 NIPSNAP3BQ9BS92 247 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 KLK5Q9Y337 293 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-212ENST00000582122 ARL2-SNX15V9GYD0 113 aa7.54□□□□□ -1.2
TOP3A-212ENST00000582122 hCG_2014768A0A024R1R8 64 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 LCE6AA0A183 80 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 CXorf65A6NEN9 183 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 DIRC3C9JPN6 131 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 PRAC2D3DTV9 90 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 CRXO43186 299 aaPredicted RBP7.53□□□□□ -1.2
TOP3A-212ENST00000582122 SPART-AS1P0CW21 52 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 CT45A10P0DMU9 189 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 PPT1P50897 306 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 ZNF138P52744 262 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 ZFP69Q49AA0 526 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 SLC51BQ86UW2 128 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 IQCF2Q8IXL9 164 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 C1orf158Q8N1D5 194 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 LINC01587Q99440 93 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 LYSTQ99698 3801 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 PYGO2Q9BRQ0 406 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 AGPAT4-IT1Q9H0P7 198 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 ZNF492Q9P255 531 aa7.53□□□□□ -1.2
TOP3A-212ENST00000582122 DNAH1Q9P2D7 4330 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 LOC102723971A0A1B0GUV8 181 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 C7orf71A4D174 169 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 MAP1LC3B2A6NCE7 125 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 KLLNB2CW77 178 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 HMGB3O15347 200 aaKnown RBP7.52□□□□□ -1.21
TOP3A-212ENST00000582122 GPX1P07203 203 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 RBMY1A1P0DJD3 496 aaKnown RBP7.52□□□□□ -1.21
TOP3A-212ENST00000582122 RBMY1CP0DJD4 496 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 RBMY1FQ15415 496 aaKnown RBP7.52□□□□□ -1.21
TOP3A-212ENST00000582122 C16orf74Q96GX8 76 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 NDFIP1Q9BT67 221 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 MAP1LC3BQ9GZQ8 125 aa7.52□□□□□ -1.21
TOP3A-212ENST00000582122 HUWE1Q7Z6Z7 4374 aaKnown RBP7.52□□□□□ -1.21
TOP3A-212ENST00000582122 TRAV12-2A0A075B6T6 113 aa7.51□□□□□ -1.21
TOP3A-212ENST00000582122 IGKV2-40A0A087WW87 121 aaPredicted RBP7.51□□□□□ -1.21
TOP3A-212ENST00000582122 LYRM9A8MSI8 78 aa7.51□□□□□ -1.21
TOP3A-212ENST00000582122 F6UZH7 168 aa7.51□□□□□ -1.21
TOP3A-212ENST00000582122 IGKV2D-40P01614 121 aaPredicted RBP7.51□□□□□ -1.21
TOP3A-212ENST00000582122 FHITP49789 147 aa7.51□□□□□ -1.21
TOP3A-212ENST00000582122 TCTAP57738 103 aa7.51□□□□□ -1.21
TOP3A-212ENST00000582122 SUMO1P63165 101 aaKnown RBP7.51□□□□□ -1.21
TOP3A-212ENST00000582122 GFI1BQ5VTD9 330 aa7.51□□□□□ -1.21
TOP3A-212ENST00000582122 MBD3L1Q8WWY6 194 aa7.51□□□□□ -1.21
TOP3A-212ENST00000582122 FAM19A4Q96LR4 140 aa7.51□□□□□ -1.21
TOP3A-212ENST00000582122 LINC00467Q9BRT7 94 aa7.51□□□□□ -1.21
TOP3A-212ENST00000582122 ERCC8Q13216 396 aa7.5□□□□□ -1.21
TOP3A-212ENST00000582122 ZNF726P1Q15940 193 aa7.5□□□□□ -1.21
TOP3A-212ENST00000582122 CEMP1Q6PRD7 247 aaPredicted RBP7.5□□□□□ -1.21
TOP3A-212ENST00000582122 ZNF680Q8NEM1 530 aa7.5□□□□□ -1.21
TOP3A-212ENST00000582122 FAM213BQ8TBF2 198 aa7.5□□□□□ -1.21
TOP3A-212ENST00000582122 TMEM263Q8WUH6 116 aaKnown RBP7.5□□□□□ -1.21
TOP3A-212ENST00000582122 SFT2D1Q8WV19 159 aa7.5□□□□□ -1.21
TOP3A-212ENST00000582122 HIST1H2BAQ96A08 127 aa7.5□□□□□ -1.21
TOP3A-212ENST00000582122 VGLL1Q99990 258 aa7.5□□□□□ -1.21
TOP3A-212ENST00000582122 ATG101Q9BSB4 218 aa7.5□□□□□ -1.21
TOP3A-212ENST00000582122 EPDR1Q9UM22 224 aa7.5□□□□□ -1.21
TOP3A-212ENST00000582122 STARD9Q9P2P6 4700 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 TRAV10A0A0B4J240 114 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 TRAV12-3A0A0B4J271 114 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 DEFB4AO15263 64 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 IFNA7P01567 189 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 TCRAP04437 139 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 H2AFB1P0C5Y9 115 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 SAPCD1Q5SSQ6 148 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 ZFAND6Q6FIF0 208 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 GOLT1AQ6ZVE7 132 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 CYB561D1Q8N8Q1 229 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 PHLDA1Q8WV24 401 aaPredicted RBP7.49□□□□□ -1.21
TOP3A-212ENST00000582122 FAM210BQ96KR6 192 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 DKK2Q9UBU2 259 aa7.49□□□□□ -1.21
TOP3A-212ENST00000582122 TIMM8BQ9Y5J9 83 aaPredicted RBP7.49□□□□□ -1.21
TOP3A-212ENST00000582122 TRAV1-1A0A0B4J248 108 aa7.48□□□□□ -1.21
TOP3A-212ENST00000582122 FAM74A7A6NL05 159 aa7.48□□□□□ -1.21
TOP3A-212ENST00000582122 ZNF705GA8MUZ8 300 aaPredicted RBP7.48□□□□□ -1.21
TOP3A-212ENST00000582122 SNURFLB1AK76 121 aa7.48□□□□□ -1.21
TOP3A-212ENST00000582122 RGS13O14921 159 aa7.48□□□□□ -1.21
TOP3A-212ENST00000582122 EIF3GO75821 320 aaKnown RBP eCLIP7.48□□□□□ -1.21
TOP3A-212ENST00000582122 RNASE4P34096 147 aaKnown RBP7.48□□□□□ -1.21
TOP3A-212ENST00000582122 EMP1P54849 157 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms