RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 GDF5OSQ5U4N7 250 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 CYB561D1Q8N8Q1 229 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 TUBA4BQ9H853 241 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 GNG13Q9P2W3 67 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 VAX2Q9UIW0 290 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 EPDR1Q9UM22 224 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 RBMY1BA6NDE4 496 aaKnown RBP7.65□□□□□ -1.18
CCDC47-203ENST00000580986 RBMY1EA6NEQ0 496 aaKnown RBP7.65□□□□□ -1.18
CCDC47-203ENST00000580986 ZNF705FA8MVS1 300 aaPredicted RBP7.65□□□□□ -1.18
CCDC47-203ENST00000580986 UBE2CO00762 179 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 PDE6DO43924 150 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 RBMY1DP0C7P1 496 aaKnown RBP7.65□□□□□ -1.18
CCDC47-203ENST00000580986 UBE2G2P60604 165 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 MEF2BQ02080 365 aaPredicted RBP7.65□□□□□ -1.18
CCDC47-203ENST00000580986 ZNF124Q15973 351 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 CST9LP1Q5W188 147 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 AMTNQ6UX39 209 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 TMEM75Q8N9X5 138 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 C11orf52Q96A22 123 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 FAM210AQ96ND0 272 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 C1QTNF4Q9BXJ3 329 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 SMDT1Q9H4I9 107 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 KLF12Q9Y4X4 402 aa7.65□□□□□ -1.18
CCDC47-203ENST00000580986 TRBV6-1A0A0K0K1D8 114 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 A0A1B0GV50 99 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 KNCNA6PVL3 124 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 C11orf94C9JXX5 98 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 PRAC2D3DTV9 90 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 F6UB75 175 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 PEX7O00628 323 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 S100A9P06702 114 aaKnown RBP7.64□□□□□ -1.19
CCDC47-203ENST00000580986 FRMD6-AS1P0C7T7 363 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 CRISP2P16562 243 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 ATP5G3P48201 142 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 DEFA6Q01524 100 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 HIST1H1AQ02539 215 aaPredicted RBP7.64□□□□□ -1.19
CCDC47-203ENST00000580986 TMEM78Q5T7P6 136 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 MRAPQ8TCY5 172 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 FAM19A4Q96LR4 140 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 CSTL1Q9H114 145 aa7.64□□□□□ -1.19
CCDC47-203ENST00000580986 FBN3Q75N90 2809 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 IGKV2-40A0A087WW87 121 aaPredicted RBP7.63□□□□□ -1.19
CCDC47-203ENST00000580986 LOC102723971A0A1B0GUV8 181 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 RBFOX3A6NFN3 312 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 TMEM250H0YL14 139 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 IGKV2D-40P01614 121 aaPredicted RBP7.63□□□□□ -1.19
CCDC47-203ENST00000580986 TSPOP30536 169 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 ZNF138P52744 262 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 ZNF506Q5JVG8 444 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 GOLT1AQ6ZVE7 132 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 Q6ZWC4 215 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 OR4B1Q8NGF8 309 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 C2CD4CQ8TF44 421 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 FMC1Q96HJ9 113 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 C20orf144Q9BQM9 153 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 AGPAT4-IT1Q9H0P7 198 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 MED9Q9NWA0 146 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 ZNF492Q9P255 531 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 TP53TG1Q9Y2A0 90 aa7.63□□□□□ -1.19
CCDC47-203ENST00000580986 IGLV2-11P01706 119 aa7.62□□□□□ -1.19
CCDC47-203ENST00000580986 PRB2P02812 416 aaPredicted RBP7.62□□□□□ -1.19
CCDC47-203ENST00000580986 CT45A10P0DMU9 189 aa7.62□□□□□ -1.19
CCDC47-203ENST00000580986 CDKN1BP46527 198 aa7.62□□□□□ -1.19
CCDC47-203ENST00000580986 DEFB1P60022 68 aa7.62□□□□□ -1.19
CCDC47-203ENST00000580986 GNG5P63218 68 aa7.62□□□□□ -1.19
CCDC47-203ENST00000580986 COX8CQ7Z4L0 72 aa7.62□□□□□ -1.19
CCDC47-203ENST00000580986 SMIM12Q96EX1 92 aa7.62□□□□□ -1.19
CCDC47-203ENST00000580986 B9D2Q9BPU9 175 aa7.62□□□□□ -1.19
CCDC47-203ENST00000580986 AGRNO00468 2067 aa7.62□□□□□ -1.19
CCDC47-203ENST00000580986 KLLNB2CW77 178 aa7.61□□□□□ -1.19
CCDC47-203ENST00000580986 GIG44P09565 113 aaPredicted RBP7.61□□□□□ -1.19
CCDC47-203ENST00000580986 LEPP41159 167 aa7.61□□□□□ -1.19
CCDC47-203ENST00000580986 FLI1Q01543 452 aaPredicted RBP7.61□□□□□ -1.19
CCDC47-203ENST00000580986 HAGHQ16775 308 aa7.61□□□□□ -1.19
CCDC47-203ENST00000580986 TMEM183BQ1AE95 376 aa7.61□□□□□ -1.19
CCDC47-203ENST00000580986 SAPCD1Q5SSQ6 148 aa7.61□□□□□ -1.19
CCDC47-203ENST00000580986 VGLL1Q99990 258 aa7.61□□□□□ -1.19
CCDC47-203ENST00000580986 NDFIP1Q9BT67 221 aa7.61□□□□□ -1.19
CCDC47-203ENST00000580986 ZFP30Q9Y2G7 519 aa7.61□□□□□ -1.19
CCDC47-203ENST00000580986 RAB19A4D1S5 217 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 PAX4O43316 350 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 CA1P00915 261 aaPredicted RBP7.6□□□□□ -1.19
CCDC47-203ENST00000580986 ZNF705DP0CH99 300 aaPredicted RBP7.6□□□□□ -1.19
CCDC47-203ENST00000580986 ZNF705BP0CI00 300 aaPredicted RBP7.6□□□□□ -1.19
CCDC47-203ENST00000580986 RPL35AP18077 110 aaKnown RBP7.6□□□□□ -1.19
CCDC47-203ENST00000580986 AKR1C3P42330 323 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 TAS2R60P59551 318 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 DEFB121Q5J5C9 76 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 TOR2AQ5JU69 321 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 TMEM256Q8N2U0 113 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 ZFAND2AQ8N6M9 145 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 CSNK1G2-AS1Q8NCQ2 148 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 IGF2BP2-AS1Q96M15 143 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 TM2D3Q9BRN9 247 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 EIF5A2Q9GZV4 153 aaKnown RBP7.6□□□□□ -1.19
CCDC47-203ENST00000580986 SLC35B3Q9H1N7 401 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 PSG8Q9UQ74 426 aa7.6□□□□□ -1.19
CCDC47-203ENST00000580986 TRAV8-1A0A0A6YYK1 113 aa7.59□□□□□ -1.19
CCDC47-203ENST00000580986 CRXO43186 299 aaPredicted RBP7.59□□□□□ -1.19
CCDC47-203ENST00000580986 LTAP01374 205 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms