RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 FMC1Q96HJ9 113 aa11.48□□□□□ -0.57
SS18-216ENST00000580751 PARLQ9H300 379 aa11.48□□□□□ -0.57
SS18-216ENST00000580751 LOC102724200A0A096LPH7 203 aaPredicted RBP11.47□□□□□ -0.57
SS18-216ENST00000580751 ZNF727A8MUV8 499 aa11.47□□□□□ -0.57
SS18-216ENST00000580751 PNRC1Q12796 327 aaPredicted RBP11.47□□□□□ -0.57
SS18-216ENST00000580751 ZNF124Q15973 351 aa11.47□□□□□ -0.57
SS18-216ENST00000580751 LINC00322Q6ZN03 302 aaPredicted RBP11.47□□□□□ -0.57
SS18-216ENST00000580751 SMIM7Q9BQ49 75 aa11.47□□□□□ -0.57
SS18-216ENST00000580751 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
SS18-216ENST00000580751 PPP1R14DQ9NXH3 145 aa11.47□□□□□ -0.57
SS18-216ENST00000580751 RBMY1BA6NDE4 496 aaKnown RBP11.46□□□□□ -0.57
SS18-216ENST00000580751 RBMY1EA6NEQ0 496 aaKnown RBP11.46□□□□□ -0.57
SS18-216ENST00000580751 M0R3E3 92 aa11.46□□□□□ -0.57
SS18-216ENST00000580751 RBMY1DP0C7P1 496 aaKnown RBP11.46□□□□□ -0.57
SS18-216ENST00000580751 RPL35P42766 123 aaKnown RBP11.46□□□□□ -0.57
SS18-216ENST00000580751 ACTL10Q5JWF8 245 aa11.46□□□□□ -0.57
SS18-216ENST00000580751 STHQ8IWL8 128 aa11.46□□□□□ -0.57
SS18-216ENST00000580751 ZFP30Q9Y2G7 519 aa11.46□□□□□ -0.57
SS18-216ENST00000580751 TGP01266 2768 aa11.46□□□□□ -0.58
SS18-216ENST00000580751 TRBV7-9A0A0J9YWB2 115 aa11.45□□□□□ -0.58
SS18-216ENST00000580751 APOC4P55056 127 aa11.45□□□□□ -0.58
SS18-216ENST00000580751 UBE2G1P62253 170 aa11.45□□□□□ -0.58
SS18-216ENST00000580751 TMEM241Q24JQ0 296 aa11.45□□□□□ -0.58
SS18-216ENST00000580751 FOXI2Q6ZQN5 318 aa11.45□□□□□ -0.58
SS18-216ENST00000580751 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
SS18-216ENST00000580751 ZNF738Q8NE65 137 aa11.45□□□□□ -0.58
SS18-216ENST00000580751 NAT8Q9UHE5 227 aa11.45□□□□□ -0.58
SS18-216ENST00000580751 LENEPQ9Y5L5 61 aa11.45□□□□□ -0.58
SS18-216ENST00000580751 KIR2DL5BA0A0G2JN68 375 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 KIR2DL5BA0A0G2JPC4 375 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 KNCNA6PVL3 124 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 ADCYAP1P18509 176 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 GNG4P50150 75 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 CEBPGP53567 150 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 GNG5P63218 68 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 EBLN2Q6P2I7 272 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 GOLT1AQ6ZVE7 132 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 KIR2DL5AQ8N109 375 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 SVBPQ8N300 66 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 RNF182Q8N6D2 247 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 OR10J6PQ8NGY7 276 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 KIR2DL5BQ8NHK3 375 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 C20orf173Q96LM9 149 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 LINC00477Q96M19 166 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 SAV1Q9H4B6 383 aaPredicted RBP11.44□□□□□ -0.58
SS18-216ENST00000580751 BIN3Q9NQY0 253 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
SS18-216ENST00000580751 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
SS18-216ENST00000580751 FLI1Q01543 452 aaPredicted RBP11.43□□□□□ -0.58
SS18-216ENST00000580751 IGFL4Q6B9Z1 124 aa11.43□□□□□ -0.58
SS18-216ENST00000580751 COX8CQ7Z4L0 72 aa11.43□□□□□ -0.58
SS18-216ENST00000580751 TRPT1Q86TN4 253 aaKnown RBP11.43□□□□□ -0.58
SS18-216ENST00000580751 SBSPONQ8IVN8 264 aa11.43□□□□□ -0.58
SS18-216ENST00000580751 TVP23CQ96ET8 276 aa11.43□□□□□ -0.58
SS18-216ENST00000580751 NBEAL2Q6ZNJ1 2754 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 B4DEV8 164 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 LTAP01374 205 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 IGLV2-11P01706 119 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
SS18-216ENST00000580751 HLA-DMBP28068 263 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 ZNF674Q2M3X9 581 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 BAGE2Q86Y30 109 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 OR8A1Q8NGG7 326 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 IGF2BP2-AS1Q96M15 143 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 ODF3Q96PU9 254 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 ASCL2Q99929 193 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 DERL1Q9BUN8 251 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 SDF2L1Q9HCN8 221 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
SS18-216ENST00000580751 A0A0J9YX75 114 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 ZNF705FA8MVS1 300 aaPredicted RBP11.41□□□□□ -0.58
SS18-216ENST00000580751 NPIPB6E9PJ23 425 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 H3BMM0 161 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 UBE2CO00762 179 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 DUSP14O95147 198 aaKnown RBP11.41□□□□□ -0.58
SS18-216ENST00000580751 SNAPINO95295 136 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 CENPWQ5EE01 88 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 TMEM78Q5T7P6 136 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 MORN3Q6PF18 240 aaPredicted RBP11.41□□□□□ -0.58
SS18-216ENST00000580751 TMEM183AQ8IXX5 376 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 NDFIP1Q9BT67 221 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 MLST8Q9BVC4 326 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 RPH3ALQ9UNE2 315 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 STAB2Q8WWQ8 2551 aa11.41□□□□□ -0.58
SS18-216ENST00000580751 TRBV20OR9-2A0A075B6H5 130 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 F6UB75 175 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 APOC3P02656 99 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 ZNF138P52744 262 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 DEFB1P60022 68 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 NUTF2P61970 127 aaKnown RBP11.4□□□□□ -0.58
SS18-216ENST00000580751 GDF5OSQ5U4N7 250 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 Q86TA4 180 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 LINC01551Q86U37 167 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 LINC00479Q96M42 142 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 SPATA25Q9BR10 227 aa11.4□□□□□ -0.58
SS18-216ENST00000580751 TM2D3Q9BRN9 247 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms