RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 LENEPQ9Y5L5 61 aa10.55□□□□□ -0.72
SKA2-205ENST00000580541 LOC102723971A0A1B0GUV8 181 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 K7EIL1 84 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 PRB2P02812 416 aaPredicted RBP10.54□□□□□ -0.72
SKA2-205ENST00000580541 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
SKA2-205ENST00000580541 LEPP41159 167 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 ATP5G3P48201 142 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 ZNF138P52744 262 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 UBE2G1P62253 170 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 DEFA6Q01524 100 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 ZNF506Q5JVG8 444 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 GDF5OSQ5U4N7 250 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 TMEM75Q8N9X5 138 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
SKA2-205ENST00000580541 FMC1Q96HJ9 113 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 CITED4Q96RK1 184 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 AGPAT4-IT1Q9H0P7 198 aa10.54□□□□□ -0.72
SKA2-205ENST00000580541 NBEAL1Q6ZS30 2694 aa10.53□□□□□ -0.72
SKA2-205ENST00000580541 IGKV2-40A0A087WW87 121 aaPredicted RBP10.53□□□□□ -0.72
SKA2-205ENST00000580541 A8MTW9 85 aa10.53□□□□□ -0.72
SKA2-205ENST00000580541 IGKV2D-40P01614 121 aaPredicted RBP10.53□□□□□ -0.72
SKA2-205ENST00000580541 IGKV3-20P01619 116 aa10.53□□□□□ -0.72
SKA2-205ENST00000580541 ZNF705DP0CH99 300 aaPredicted RBP10.53□□□□□ -0.72
SKA2-205ENST00000580541 ZNF705BP0CI00 300 aaPredicted RBP10.53□□□□□ -0.72
SKA2-205ENST00000580541 AKR1C3P42330 323 aa10.53□□□□□ -0.72
SKA2-205ENST00000580541 GNG5P63218 68 aa10.53□□□□□ -0.72
SKA2-205ENST00000580541 SAPCD1Q5SSQ6 148 aa10.53□□□□□ -0.72
SKA2-205ENST00000580541 MED9Q9NWA0 146 aa10.53□□□□□ -0.72
SKA2-205ENST00000580541 ZNF492Q9P255 531 aa10.53□□□□□ -0.72
SKA2-205ENST00000580541 RAB19A4D1S5 217 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 RBMY1BA6NDE4 496 aaKnown RBP10.52□□□□□ -0.73
SKA2-205ENST00000580541 RBMY1EA6NEQ0 496 aaKnown RBP10.52□□□□□ -0.73
SKA2-205ENST00000580541 TMEM250H0YL14 139 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 RBMY1DP0C7P1 496 aaKnown RBP10.52□□□□□ -0.73
SKA2-205ENST00000580541 FRMD6-AS1P0C7T7 363 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 CDKN1BP46527 198 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 DEFB1P60022 68 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 FLI1Q01543 452 aaPredicted RBP10.52□□□□□ -0.73
SKA2-205ENST00000580541 TOR2AQ5JU69 321 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 RARRES2Q99969 163 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 VGLL1Q99990 258 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 PSG8Q9UQ74 426 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 ZFP30Q9Y2G7 519 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 KLF12Q9Y4X4 402 aa10.52□□□□□ -0.73
SKA2-205ENST00000580541 CT45A10P0DMU9 189 aa10.51□□□□□ -0.73
SKA2-205ENST00000580541 TAS2R60P59551 318 aa10.51□□□□□ -0.73
SKA2-205ENST00000580541 ERCC8Q13216 396 aa10.51□□□□□ -0.73
SKA2-205ENST00000580541 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
SKA2-205ENST00000580541 LINC00322Q6ZN03 302 aaPredicted RBP10.51□□□□□ -0.73
SKA2-205ENST00000580541 C11orf52Q96A22 123 aa10.51□□□□□ -0.73
SKA2-205ENST00000580541 TRBV6-1A0A0K0K1D8 114 aa10.5□□□□□ -0.73
SKA2-205ENST00000580541 SCO2A0A1W2PP80 73 aa10.5□□□□□ -0.73
SKA2-205ENST00000580541 CA1P00915 261 aaPredicted RBP10.5□□□□□ -0.73
SKA2-205ENST00000580541 GPX1P07203 203 aa10.5□□□□□ -0.73
SKA2-205ENST00000580541 Q6ZWC4 215 aa10.5□□□□□ -0.73
SKA2-205ENST00000580541 PRNTQ86SH4 94 aa10.5□□□□□ -0.73
SKA2-205ENST00000580541 TREM1Q9NP99 234 aa10.5□□□□□ -0.73
SKA2-205ENST00000580541 CRISP2P16562 243 aa10.49□□□□□ -0.73
SKA2-205ENST00000580541 AMTNQ6UX39 209 aa10.49□□□□□ -0.73
SKA2-205ENST00000580541 C2CD4CQ8TF44 421 aa10.49□□□□□ -0.73
SKA2-205ENST00000580541 C20orf144Q9BQM9 153 aa10.49□□□□□ -0.73
SKA2-205ENST00000580541 TRAV34A0A0B4J273 112 aa10.48□□□□□ -0.73
SKA2-205ENST00000580541 RPL35P42766 123 aaKnown RBP10.48□□□□□ -0.73
SKA2-205ENST00000580541 SPINK13Q1W4C9 94 aa10.48□□□□□ -0.73
SKA2-205ENST00000580541 IGF2BP2-AS1Q96M15 143 aa10.48□□□□□ -0.73
SKA2-205ENST00000580541 SLC35B3Q9H1N7 401 aa10.48□□□□□ -0.73
SKA2-205ENST00000580541 BIN3Q9NQY0 253 aa10.48□□□□□ -0.73
SKA2-205ENST00000580541 XCL2Q9UBD3 114 aa10.48□□□□□ -0.73
SKA2-205ENST00000580541 GOLT1BQ9Y3E0 138 aa10.48□□□□□ -0.73
SKA2-205ENST00000580541 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 INSP01308 110 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 IGLV2-11P01706 119 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 FAM74A3Q4VXF1 159 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 SMUG1Q53HV7 270 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 UQCC3Q6UW78 93 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 BAGE2Q86Y30 109 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 TMEM256Q8N2U0 113 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 FAM19A4Q96LR4 140 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 SGK494Q96LW2 274 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 LINC00479Q96M42 142 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 RCHY1Q96PM5 261 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 NIPSNAP3BQ9BS92 247 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 ZMAT4Q9H898 229 aa10.47□□□□□ -0.73
SKA2-205ENST00000580541 M0R2Z0 102 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 LTAP01374 205 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 NHLRC4P0CG21 123 aaPredicted RBP10.46□□□□□ -0.73
SKA2-205ENST00000580541 PRB4P10163 310 aaPredicted RBP10.46□□□□□ -0.73
SKA2-205ENST00000580541 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.73
SKA2-205ENST00000580541 GNG4P50150 75 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 CEBPGP53567 150 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 FXYD7P58549 80 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 Q8TAT8 98 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 ASCL2Q99929 193 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 B9D2Q9BPU9 175 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 TMEM208Q9BTX3 173 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 TP53TG1Q9Y2A0 90 aa10.46□□□□□ -0.73
SKA2-205ENST00000580541 C7orf71A4D174 169 aa10.45□□□□□ -0.74
SKA2-205ENST00000580541 LINC00862A6NCI5 91 aa10.45□□□□□ -0.74
SKA2-205ENST00000580541 KLLNB2CW77 178 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms