RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 NXPH4O95158 308 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 COX8AP10176 69 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 RPS28P62857 69 aaKnown RBP4.18□□□□□ -1.74
NF1-219ENST00000579081 TEX36Q5VZQ5 186 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 RHPN1-AS1Q9BWJ2 59 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 DEPPQ9NTK1 212 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 PTPRZ1P23471 2315 aaPredicted RBP4.18□□□□□ -1.74
NF1-219ENST00000579081 TRAV13-2A0A0B4J235 113 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 BUB3O43684 328 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 APOC4P55056 127 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 EFNB3Q15768 340 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 DEFB125Q8N687 156 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 ZNF106Q9H2Y7 1883 aaKnown RBP4.18□□□□□ -1.74
NF1-219ENST00000579081 CADP27708 2225 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 RLFQ13129 1914 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 A0A087WWL8 130 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 VPREB1P12018 145 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 VWC2Q2TAL6 325 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 ZNF329Q86UD4 541 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 SPACA3Q8IXA5 215 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 ZC2HC1AQ96GY0 325 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 TFF1P04155 84 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 RHOHQ15669 191 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 AMTNQ6UX39 209 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 DSCR8Q96T75 97 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 TRGV9Q99603 122 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 DOCK7Q96N67 2140 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 TMEM158Q8WZ71 300 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 C18orf12Q96KH6 178 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 PPDPFQ9H3Y8 114 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 LIME1Q9H400 295 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 FANCMQ8IYD8 2048 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 WDR83OSQ9Y284 106 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 RFNGQ9Y644 331 aa4.18□□□□□ -1.74
NF1-219ENST00000579081 CNOT1A5YKK6 2376 aaKnown RBP4.17□□□□□ -1.74
NF1-219ENST00000579081 IGHV1-3A0A0C4DH29 117 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 hDV102S1A0JD36 115 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 MED14OSP0DP75 135 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 GUSBP1Q15486 140 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.17□□□□□ -1.749e-7■■■■■ 34.8
NF1-219ENST00000579081 A0A0A6YYD4 124 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 SYNJ2BPP57105 145 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 HGFACQ04756 655 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 XCL2Q9UBD3 114 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 PRSS29PA6NIE9 313 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 KNCNA6PVL3 124 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 TAX1BP3O14907 124 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 NBL1P41271 181 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 HERV-K104P63124 156 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 Q5BKY6 102 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 ZNF497Q6ZNH5 498 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 EXOC3-AS1Q8N2X6 119 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 TRAV12-1A0A0B4J245 112 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 WBP1Q96G27 269 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 ALPK3Q96L96 1907 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 GAGE12HA6NDE8 117 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 PAX9P55771 341 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 SLAQ13239 276 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 NUP35Q8NFH5 326 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 C1QCP02747 245 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 CD55P08174 381 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 SPINK8P0C7L1 97 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 IGHV1-8P0DP01 117 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 C10orf55Q5SWW7 151 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 PLXNA4Q9HCM2 1894 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 A4D1N5 150 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 TMEM75Q8N9X5 138 aa4.17□□□□□ -1.74
NF1-219ENST00000579081 IGKV1D-43A0A0B4J1Z2 117 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 M0R1W7 72 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 TMEM14EPQ6UXP3 125 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 TMEM243Q9BU79 118 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 PLXNB3Q9ULL4 1909 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 IGKV1D-13A0A0B4J2D9 117 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 SYS1-DBNDD2H3BUS1 97 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 IGKV1-13P0DP09 117 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 FOXG1P55316 489 aaPredicted RBP4.16□□□□□ -1.74
NF1-219ENST00000579081 MST1LQ2TV78 715 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 IGFL4Q6B9Z1 124 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 NLRC5Q86WI3 1866 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 IGHV3-16A0A0C4DH30 117 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 C4orf51C9J302 202 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 OVOL3O00110 214 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 TCF15Q12870 199 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 Q8TAT8 98 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 LCTP09848 1927 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 TMEM200BQ69YZ2 307 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 DKK4Q9UBT3 224 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 IGKV1OR2-108A0A075B7D4 117 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 C5orf64Q2M2E5 130 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 ZNF407Q9C0G0 2248 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 COL6A6A6NMZ7 2263 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 ZC2HC1BQ5TFG8 222 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 DAZ1Q9NQZ3 744 aaKnown RBP4.16□□□□□ -1.74
NF1-219ENST00000579081 ZNF319Q9P2F9 582 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 J3QRE1 110 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 IGKV1-5P01602 117 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 Q6P435 159 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 LTBP1Q14766 1721 aa4.16□□□□□ -1.74
NF1-219ENST00000579081 IGKV2D-24A0A075B6R9 120 aa4.15□□□□□ -1.74
NF1-219ENST00000579081 RNF223E7ERA6 249 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms