RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PPP1R14DQ9NXH3 145 aa9.16□□□□□ -0.94
CCDC57-211ENST00000578187 TMEM189A5PLL7 270 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 HMGB3O15347 200 aaKnown RBP9.15□□□□□ -0.94
CCDC57-211ENST00000578187 ARL14EPLP0DKL9 152 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 CT45A10P0DMU9 189 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 TSPOP30536 169 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 RANP62826 216 aaKnown RBP9.15□□□□□ -0.94
CCDC57-211ENST00000578187 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 Q6ZTC4 211 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 TCTE3Q8IZS6 198 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 TMEM256Q8N2U0 113 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 RAB24Q969Q5 203 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 FAM19A4Q96LR4 140 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 C20orf144Q9BQM9 153 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 APLNQ9ULZ1 77 aa9.15□□□□□ -0.94
CCDC57-211ENST00000578187 IGHV4-4A0A075B6R2 117 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 IGKV2-40A0A087WW87 121 aaPredicted RBP9.14□□□□□ -0.95
CCDC57-211ENST00000578187 A0A0D9SG52 128 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 BCL2L11O43521 198 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 IGKV2D-40P01614 121 aaPredicted RBP9.14□□□□□ -0.95
CCDC57-211ENST00000578187 HBE1P02100 147 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 LEPP41159 167 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 ERCC8Q13216 396 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 KIR3DS1Q14943 382 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 RRN3P1Q2M238 152 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 GFI1BQ5VTD9 330 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 SSX7Q7RTT5 188 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 SUN5Q8TC36 379 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 LINC00477Q96M19 166 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
CCDC57-211ENST00000578187 AGPAT4-IT1Q9H0P7 198 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 OTORQ9NRC9 128 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 CELA1Q9UNI1 258 aa9.14□□□□□ -0.95
CCDC57-211ENST00000578187 DEFB131BA0A096LNP1 70 aa9.13□□□□□ -0.95
CCDC57-211ENST00000578187 TEX48A0A1B0GUV7 120 aa9.13□□□□□ -0.95
CCDC57-211ENST00000578187 LOC102723971A0A1B0GUV8 181 aa9.13□□□□□ -0.95
CCDC57-211ENST00000578187 RBAKDNA6NC62 111 aa9.13□□□□□ -0.95
CCDC57-211ENST00000578187 SLC25A5P05141 298 aaKnown RBP9.13□□□□□ -0.95
CCDC57-211ENST00000578187 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
CCDC57-211ENST00000578187 CTXND1A0A1B0GTU2 59 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 KANTRA0A1W2PQU2 76 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 KLLNB2CW77 178 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 CXorf1O96002 111 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 P0DMU3 169 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 FAM231AP0DMU4 169 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 FAM231CP0DMU5 169 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 CRISP2P16562 243 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 GCHFRP30047 84 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 CSN1S1P47710 185 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 AKR1C8PQ5T2L2 129 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 TMEM78Q5T7P6 136 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 ARL6IP6Q8N6S5 226 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 RXFP4Q8TDU9 374 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 VGLL1Q99990 258 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 NDUFAF3Q9BU61 184 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 ZNF492Q9P255 531 aa9.12□□□□□ -0.95
CCDC57-211ENST00000578187 TRBV7-9A0A0J9YWB2 115 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 ZNF705GA8MUZ8 300 aaPredicted RBP9.11□□□□□ -0.95
CCDC57-211ENST00000578187 DIRC3C9JPN6 131 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 H7BYZ3 331 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 NMBP08949 121 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 TAS2R60P59551 318 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 C12orf74Q32Q52 190 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 FAM74A1Q5RGS3 127 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 LINC01587Q99440 93 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 TMEM167BQ9NRX6 74 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 DKK2Q9UBU2 259 aa9.11□□□□□ -0.95
CCDC57-211ENST00000578187 YTHDF2Q9Y5A9 579 aaKnown RBP9.11□□□□□ -0.95
CCDC57-211ENST00000578187 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 C7orf71A4D174 169 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 PGPA6NDG6 321 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 C1QBP02746 253 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 PRM2P04554 102 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 SEC11BP0C7V7 166 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 ZNF138P52744 262 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 EMP1P54849 157 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 FAM222AQ5U5X8 452 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 TMUB2Q71RG4 321 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 ZFAND2AQ8N6M9 145 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 Q8TAT8 98 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 CMTM2Q8TAZ6 248 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 ZNF471Q9BX82 626 aaPredicted RBP9.1□□□□□ -0.95
CCDC57-211ENST00000578187 KMT2AQ03164 3969 aa9.1□□□□□ -0.95
CCDC57-211ENST00000578187 TRAV12-3A0A0B4J271 114 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 J3KRW8 73 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 PFDN1O60925 122 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 AZU1P20160 251 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 BTN1A1Q13410 526 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 PRR9Q5T870 116 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 ZNF767PQ75MW2 155 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 STOML3Q8TAV4 291 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 RNASE8Q8TDE3 154 aaKnown RBP9.09□□□□□ -0.95
CCDC57-211ENST00000578187 TMEM263Q8WUH6 116 aaKnown RBP9.09□□□□□ -0.95
CCDC57-211ENST00000578187 TMED6Q8WW62 240 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 C16orf74Q96GX8 76 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 HYLS1Q96M11 299 aa9.09□□□□□ -0.95
CCDC57-211ENST00000578187 hCG_2014768A0A024R1R8 64 aa9.08□□□□□ -0.96
CCDC57-211ENST00000578187 MAP1LC3B2A6NCE7 125 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms