RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 TTC32Q5I0X7 151 aa10.1□□□□□ -0.79
SMARCE1-213ENST00000578044 OR5C1Q8NGR4 320 aa10.1□□□□□ -0.79
SMARCE1-213ENST00000578044 GNPNAT1Q96EK6 184 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-213ENST00000578044 FAM167A-AS1Q96KT0 104 aa10.1□□□□□ -0.79
SMARCE1-213ENST00000578044 KRTAP17-1Q9BYP8 105 aa10.1□□□□□ -0.79
SMARCE1-213ENST00000578044 LINC00588Q9Y4M8 146 aa10.1□□□□□ -0.79
SMARCE1-213ENST00000578044 TIMM9Q9Y5J7 89 aa10.1□□□□□ -0.79
SMARCE1-213ENST00000578044 RYR1P21817 5038 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 TRAV12-3A0A0B4J271 114 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 RBAKDNA6NC62 111 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 NUDT3O95989 172 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 NBEAP1P0C6P0 100 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 CLINT1Q14677 625 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 EIF4E3Q8N5X7 224 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 ARL6IP6Q8N6S5 226 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 C11orf72Q8NBR9 251 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 ENKURQ8TC29 256 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 MARVELD1Q9BSK0 173 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 WDR61Q9GZS3 305 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 AGPAT4-IT1Q9H0P7 198 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
SMARCE1-213ENST00000578044 H3BTX0 84 aa10.08□□□□□ -0.8
SMARCE1-213ENST00000578044 M0R3E3 92 aa10.08□□□□□ -0.8
SMARCE1-213ENST00000578044 PET100P0DJ07 73 aa10.08□□□□□ -0.8
SMARCE1-213ENST00000578044 NHLH2Q02577 135 aa10.08□□□□□ -0.8
SMARCE1-213ENST00000578044 SSX7Q7RTT5 188 aa10.08□□□□□ -0.8
SMARCE1-213ENST00000578044 SLC25A2Q9BXI2 301 aa10.08□□□□□ -0.8
SMARCE1-213ENST00000578044 TP53TG3Q9ULZ0 132 aa10.08□□□□□ -0.8
SMARCE1-213ENST00000578044 TRAV26-1A0A087WT03 109 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 C17orf112F2Z3M2 114 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 SNRPCP09234 159 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 TCL1AP56279 114 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 SLAQ13239 276 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 TMEM78Q5T7P6 136 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 OR51M1Q9H341 326 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 Q9H3A6 140 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 Q9H8V8 135 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 PTTG2Q9NZH5 202 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
SMARCE1-213ENST00000578044 A6NHS1 94 aa10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 INMT-MINDY4F8WBC2 141 aa10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 H0YIZ8 118 aa10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 SPINK4O60575 86 aa10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 PYYP10082 97 aa10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 HOXA5P20719 270 aa10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 ZFAND2AQ8N6M9 145 aa10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 TMED6Q8WW62 240 aa10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 FUT9Q9Y231 359 aa10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 MRPS16Q9Y3D3 137 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-213ENST00000578044 GAGE12BA1L429 117 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 GAGE7O76087 117 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 GPX1P07203 203 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 GAGE12FP0CL80 117 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 GAGE12GP0CL81 117 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 GAGE12IP0CL82 117 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 OR5I1Q13606 314 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 ICAM4Q14773 271 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 GCSAMLQ5JQS6 135 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 FXYD5Q96DB9 178 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 ATP5SQ99766 215 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 PAXXQ9BUH6 204 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 OR5AC2Q9NZP5 309 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 LRP1BQ9NZR2 4599 aa10.05□□□□□ -0.8
SMARCE1-213ENST00000578044 CDK2AP2O75956 126 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 ZNF138P52744 262 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 H2BFSP57053 126 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 CD300CQ08708 224 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 Q6ZTI0 123 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 MIR17HGQ75NE6 70 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 EXOC3-AS1Q8N2X6 119 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 THAP6Q8TBB0 222 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 PPP1R1CQ8WVI7 109 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 ST6GAL2Q96JF0 529 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 HSPG2P98160 4391 aa10.04□□□□□ -0.8
SMARCE1-213ENST00000578044 TRGV2A0A075B6R0 118 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 K7EP13 123 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 MPC2O95563 127 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 CSN1S1P47710 185 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 TAS2R45P59539 299 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 DEFA1P59665 94 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 DEFA3P59666 94 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 IFITM3Q01628 133 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 ERCC8Q13216 396 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 ZNF266Q14584 549 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 ESRGQ1W209 222 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 IQCF2Q8IXL9 164 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 BLNKQ8WV28 456 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 VSIG2Q96IQ7 327 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 VGLL1Q99990 258 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 TMPRSS5Q9H3S3 457 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 GSN-AS1Q9NRJ2 163 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 KLF12Q9Y4X4 402 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 HSPB11Q9Y547 144 aa10.03□□□□□ -0.8
SMARCE1-213ENST00000578044 IGHV1OR15-1A0A075B7D0 117 aa10.02□□□□□ -0.81
SMARCE1-213ENST00000578044 SIX6O95475 246 aa10.02□□□□□ -0.81
SMARCE1-213ENST00000578044 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-213ENST00000578044 TNP2Q05952 138 aa10.02□□□□□ -0.81
SMARCE1-213ENST00000578044 BTN1A1Q13410 526 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms