RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 LOC102723971A0A1B0GUV8 181 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 A0A1B0GVY2 172 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 NPIPB6E9PJ23 425 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 G3V3Q6 166 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 TAAR5O14804 337 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 LEPP41159 167 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 RANP62826 216 aaKnown RBP11.44□□□□□ -0.58
VAPA-204ENST00000577901 PQLC2Q6ZP29 291 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 ZNF767PQ75MW2 155 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 ZNF503Q96F45 646 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 LINC00477Q96M19 166 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 ODF3Q96PU9 254 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 CELA1Q9UNI1 258 aa11.44□□□□□ -0.58
VAPA-204ENST00000577901 ABCA13Q86UQ4 5058 aa11.43□□□□□ -0.58
VAPA-204ENST00000577901 DEFB131BA0A096LNP1 70 aa11.43□□□□□ -0.58
VAPA-204ENST00000577901 TEX48A0A1B0GUV7 120 aa11.43□□□□□ -0.58
VAPA-204ENST00000577901 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
VAPA-204ENST00000577901 CSN1S1P47710 185 aa11.43□□□□□ -0.58
VAPA-204ENST00000577901 C12orf74Q32Q52 190 aa11.43□□□□□ -0.58
VAPA-204ENST00000577901 RPL7L1Q6DKI1 246 aaKnown RBP11.43□□□□□ -0.58
VAPA-204ENST00000577901 C20orf144Q9BQM9 153 aa11.43□□□□□ -0.58
VAPA-204ENST00000577901 ZNF705GA8MUZ8 300 aaPredicted RBP11.42□□□□□ -0.58
VAPA-204ENST00000577901 SMLR1H3BR10 107 aa11.42□□□□□ -0.58
VAPA-204ENST00000577901 P0DMU3 169 aa11.42□□□□□ -0.58
VAPA-204ENST00000577901 FAM231AP0DMU4 169 aa11.42□□□□□ -0.58
VAPA-204ENST00000577901 FAM231CP0DMU5 169 aa11.42□□□□□ -0.58
VAPA-204ENST00000577901 CDC34P49427 236 aaPredicted RBP11.42□□□□□ -0.58
VAPA-204ENST00000577901 TAS2R60P59551 318 aa11.42□□□□□ -0.58
VAPA-204ENST00000577901 POM121L12Q8N7R1 296 aa11.42□□□□□ -0.58
VAPA-204ENST00000577901 PHYHIPLQ96FC7 376 aa11.42□□□□□ -0.58
VAPA-204ENST00000577901 Q9H3A6 140 aa11.42□□□□□ -0.58
VAPA-204ENST00000577901 H7BYZ3 331 aa11.41□□□□□ -0.58
VAPA-204ENST00000577901 EIF3GO75821 320 aaKnown RBP eCLIP11.41□□□□□ -0.58
VAPA-204ENST00000577901 MED14OSP0DP75 135 aa11.41□□□□□ -0.58
VAPA-204ENST00000577901 ERCC8Q13216 396 aa11.41□□□□□ -0.58
VAPA-204ENST00000577901 FAM74A1Q5RGS3 127 aa11.41□□□□□ -0.58
VAPA-204ENST00000577901 TMEM78Q5T7P6 136 aa11.41□□□□□ -0.58
VAPA-204ENST00000577901 C9orf47Q6ZRZ4 202 aa11.41□□□□□ -0.58
VAPA-204ENST00000577901 RXFP4Q8TDU9 374 aa11.41□□□□□ -0.58
VAPA-204ENST00000577901 ACTR3CQ9C0K3 210 aaPredicted RBP11.41□□□□□ -0.58
VAPA-204ENST00000577901 AGPAT4-IT1Q9H0P7 198 aa11.41□□□□□ -0.58
VAPA-204ENST00000577901 SH3BGRL3Q9H299 93 aa11.41□□□□□ -0.58
VAPA-204ENST00000577901 YTHDF2Q9Y5A9 579 aaKnown RBP11.41□□□□□ -0.58
VAPA-204ENST00000577901 PRSS29PA6NIE9 313 aa11.4□□□□□ -0.58
VAPA-204ENST00000577901 HMGB3O15347 200 aaKnown RBP11.4□□□□□ -0.58
VAPA-204ENST00000577901 HTN1P15515 57 aa11.4□□□□□ -0.58
VAPA-204ENST00000577901 GFI1BQ5VTD9 330 aa11.4□□□□□ -0.58
VAPA-204ENST00000577901 RAB24Q969Q5 203 aa11.4□□□□□ -0.58
VAPA-204ENST00000577901 NDUFAF3Q9BU61 184 aa11.4□□□□□ -0.58
VAPA-204ENST00000577901 DKK2Q9UBU2 259 aa11.4□□□□□ -0.58
VAPA-204ENST00000577901 IGKV2-40A0A087WW87 121 aaPredicted RBP11.39□□□□□ -0.59
VAPA-204ENST00000577901 HMSDA8MTL9 139 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 J3KRW8 73 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 M0R2N4 97 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 RTL8CO15255 209 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 IGKV2D-40P01614 121 aaPredicted RBP11.39□□□□□ -0.59
VAPA-204ENST00000577901 PRM2P04554 102 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 SLC25A5P05141 298 aaKnown RBP11.39□□□□□ -0.59
VAPA-204ENST00000577901 STAG3L2P0CL84 134 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 STAG3L3P0CL85 134 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 FAM222AQ5U5X8 452 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 CMTM2Q8TAZ6 248 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 NIPSNAP3BQ9BS92 247 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 OTORQ9NRC9 128 aa11.39□□□□□ -0.59
VAPA-204ENST00000577901 TRAV12-3A0A0B4J271 114 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 RBAKDNA6NC62 111 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 PGPA6NDG6 321 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 NMBP08949 121 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 ZNF345Q14585 488 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 KIR3DS1Q14943 382 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 CCDC28AQ8IWP9 274 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 C16orf74Q96GX8 76 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 FAM19A4Q96LR4 140 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 HYLS1Q96M11 299 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 VGLL1Q99990 258 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 ARPC5LQ9BPX5 153 aa11.38□□□□□ -0.59
VAPA-204ENST00000577901 A0A0D9SG52 128 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 DIRC3C9JPN6 131 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 CXorf1O96002 111 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 GPX1P07203 203 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 AZU1P20160 251 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 ZNF138P52744 262 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 AKR1C8PQ5T2L2 129 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 ZNF493Q6ZR52 646 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 KCNRGQ8N5I3 272 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 ARL6IP6Q8N6S5 226 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 CYTL1Q9NRR1 136 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
VAPA-204ENST00000577901 TRBV7-9A0A0J9YWB2 115 aa11.36□□□□□ -0.59
VAPA-204ENST00000577901 C7orf71A4D174 169 aa11.36□□□□□ -0.59
VAPA-204ENST00000577901 LYRM9A8MSI8 78 aa11.36□□□□□ -0.59
VAPA-204ENST00000577901 KLLNB2CW77 178 aa11.36□□□□□ -0.59
VAPA-204ENST00000577901 CRISP2P16562 243 aa11.36□□□□□ -0.59
VAPA-204ENST00000577901 GCHFRP30047 84 aa11.36□□□□□ -0.59
VAPA-204ENST00000577901 RNASE4P34096 147 aaKnown RBP11.36□□□□□ -0.59
VAPA-204ENST00000577901 LGALS9BQ3B8N2 356 aa11.36□□□□□ -0.59
VAPA-204ENST00000577901 OR11H4Q8NGC9 324 aa11.36□□□□□ -0.59
VAPA-204ENST00000577901 PYGO2Q9BRQ0 406 aa11.36□□□□□ -0.59
VAPA-204ENST00000577901 TMEM167BQ9NRX6 74 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms