RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 GALR1P47211 349 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 PPT1P50897 306 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 AKR1C1Q04828 323 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 FCN2Q15485 313 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 RRN3P1Q2M238 152 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 LGALS9BQ3B8N2 356 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 LBHQ53QV2 105 aaPredicted RBP4.38□□□□□ -1.71
NUP88-212ENST00000576708 TMEM128Q5BJH2 165 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 SPATA31B1PQ5VZV4 182 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 Q6ZR54 194 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 ACOT7LQ6ZUV0 252 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 BAP18Q8IXM2 172 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 TOMM5Q8N4H5 51 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 OR11H7Q8NGC8 314 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 IGF2BP2-AS1Q96M15 143 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 TMEM208Q9BTX3 173 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 SLC25A39Q9BZJ4 359 aaPredicted RBP4.38□□□□□ -1.71
NUP88-212ENST00000576708 FLVCR2Q9UPI3 526 aa4.38□□□□□ -1.71
NUP88-212ENST00000576708 PMS2P5A8MQ11 134 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 H3BRN7 92 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 PFDN1O60925 122 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 MED6O75586 246 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 IL5P05113 134 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 IGKV2-30P06310 120 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 DEFB130BP0DP73 79 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 DEFB130AP0DP74 79 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 SLC25A6P12236 298 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 FAUP35544 74 aaKnown RBP4.37□□□□□ -1.71
NUP88-212ENST00000576708 MEOX2P50222 304 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 SEC61GP60059 68 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 DAD1P61803 113 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 RRAS2P62070 204 aaPredicted RBP4.37□□□□□ -1.71
NUP88-212ENST00000576708 CYP2G1PQ6ZSU1 146 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 CCDC190Q86UF4 302 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 ZNF738Q8NE65 137 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 UHRF2Q96PU4 802 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 SLC25A21Q9BQT8 299 aaPredicted RBP4.37□□□□□ -1.71
NUP88-212ENST00000576708 SEC22CQ9BRL7 303 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 TMEM147Q9BVK8 224 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 PSENENQ9NZ42 101 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 TMED3Q9Y3Q3 217 aa4.37□□□□□ -1.71
NUP88-212ENST00000576708 PLAC8L1A1L4L8 177 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 C9orf170A2RU37 121 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 CCDC160A6NGH7 325 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 LINC00587B1AMM8 73 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 H3BTX0 84 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 SSSCA1O60232 199 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 DUSP14O95147 198 aaKnown RBP4.36□□□□□ -1.71
NUP88-212ENST00000576708 CFDP00746 253 aaPredicted RBP4.36□□□□□ -1.71
NUP88-212ENST00000576708 INSP01308 110 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 OR5G3P0C626 314 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 METTL15P1P0C7V9 234 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 LINC00869P0C866 280 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 UBE2MP61081 183 aaKnown RBP4.36□□□□□ -1.71
NUP88-212ENST00000576708 RHOBP62745 196 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 HIST1H1AQ02539 215 aaPredicted RBP4.36□□□□□ -1.71
NUP88-212ENST00000576708 ARL16Q0P5N6 197 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 OXA1LQ15070 435 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 PATE2Q6UY27 113 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 SMIM15Q7Z3B0 74 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 TMEM144Q7Z5S9 345 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 OR4D5Q8NGN0 318 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 FAM210BQ96KR6 192 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 CIB3Q96Q77 187 aaPredicted RBP4.36□□□□□ -1.71
NUP88-212ENST00000576708 SHANK2-AS3Q9BTD1 123 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 HIGD1AQ9Y241 93 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 URGCP-MRPS24S4R325 110 aa4.36□□□□□ -1.71
NUP88-212ENST00000576708 HSPG2P98160 4391 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 TEX48A0A1B0GUV7 120 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 PRAC2D3DTV9 90 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 F5H768 121 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 CCSO14618 274 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 MRPS12O15235 138 aaKnown RBP4.35□□□□□ -1.71
NUP88-212ENST00000576708 SNAI2O43623 268 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 HYPMO75409 117 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 HTN1P15515 57 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 CXCL3P19876 107 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 ANXA7P20073 488 aaKnown RBP4.35□□□□□ -1.71
NUP88-212ENST00000576708 NKX2-5P52952 324 aaPredicted RBP4.35□□□□□ -1.71
NUP88-212ENST00000576708 TAS2R60P59551 318 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 SLC38A11Q08AI6 406 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 RNF212Q495C1 297 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 C5orf47Q569G3 176 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 C1orf134Q5TEV5 83 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 SAMD13Q5VXD3 122 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 TMEM14EPQ6UXP3 125 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 OR8A1Q8NGG7 326 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 SMIM8Q96KF7 97 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 GPR82Q96P67 336 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 LINC01587Q99440 93 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 SRRQ9GZT4 340 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 ARL6Q9H0F7 186 aa4.35□□□□□ -1.71
NUP88-212ENST00000576708 NACAE9PAV3 2078 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 PIGBOS1A0A0B4J2F0 54 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 LYRM9A8MSI8 78 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 NDUFB6O95139 128 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 RPL7P18124 248 aaKnown RBP4.34□□□□□ -1.71
NUP88-212ENST00000576708 PLP1P60201 277 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 VAMP3Q15836 100 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 IAH1Q2TAA2 248 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 693.2 ms