RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PPT1P50897 306 aa10.75□□□□□ -0.69
CTDNEP1-211ENST00000575783 OPCMLQ14982 345 aa10.75□□□□□ -0.69
CTDNEP1-211ENST00000575783 PXDC1Q5TGL8 231 aa10.75□□□□□ -0.69
CTDNEP1-211ENST00000575783 IQCF2Q8IXL9 164 aa10.75□□□□□ -0.69
CTDNEP1-211ENST00000575783 CHAC1Q9BUX1 264 aa10.75□□□□□ -0.69
CTDNEP1-211ENST00000575783 SLC25A31Q9H0C2 315 aa10.75□□□□□ -0.69
CTDNEP1-211ENST00000575783 PSENENQ9NZ42 101 aa10.75□□□□□ -0.69
CTDNEP1-211ENST00000575783 RABL2BQ9UNT1 228 aa10.75□□□□□ -0.69
CTDNEP1-211ENST00000575783 PKHD1L1Q86WI1 4243 aa10.75□□□□□ -0.69
CTDNEP1-211ENST00000575783 LOC100131303A0A0U1RQF7 123 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 M0R3E3 92 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 RS1O15537 224 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 RGS5O15539 181 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 CCNKO75909 580 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 HOXB5P09067 269 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 VAMP1P23763 118 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 NHLRC2Q8NBF2 726 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 OR10P1Q8NGE3 313 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 CIRBP-AS1Q8TBR5 109 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 TMEM37Q8WXS4 190 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 LINC00477Q96M19 166 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 TM2D2Q9BX73 214 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 AGPAT4-IT1Q9H0P7 198 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 MIXL1Q9H2W2 232 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 DNAJC4Q9NNZ3 241 aa10.74□□□□□ -0.69
CTDNEP1-211ENST00000575783 K7EPK0 472 aa10.73□□□□□ -0.69
CTDNEP1-211ENST00000575783 TNFSF8P32971 234 aa10.73□□□□□ -0.69
CTDNEP1-211ENST00000575783 POLR2GP62487 172 aaKnown RBP eCLIP10.73□□□□□ -0.69
CTDNEP1-211ENST00000575783 C4orf46Q504U0 113 aa10.73□□□□□ -0.69
CTDNEP1-211ENST00000575783 OR10J3Q5JRS4 329 aa10.73□□□□□ -0.69
CTDNEP1-211ENST00000575783 FAM19A4Q96LR4 140 aa10.73□□□□□ -0.69
CTDNEP1-211ENST00000575783 CCDC59Q9P031 241 aaKnown RBP10.73□□□□□ -0.69
CTDNEP1-211ENST00000575783 TRAV8-6A0A0B4J262 113 aa10.72□□□□□ -0.69
CTDNEP1-211ENST00000575783 ANKRD20A5PA0PJZ0 165 aa10.72□□□□□ -0.69
CTDNEP1-211ENST00000575783 IGLV2-8P01709 118 aa10.72□□□□□ -0.69
CTDNEP1-211ENST00000575783 GUK1Q16774 197 aa10.72□□□□□ -0.69
CTDNEP1-211ENST00000575783 C10orf113Q5VZT2 155 aa10.72□□□□□ -0.69
CTDNEP1-211ENST00000575783 ZNF546Q86UE3 836 aa10.72□□□□□ -0.69
CTDNEP1-211ENST00000575783 OR10G4Q8NGN3 311 aa10.72□□□□□ -0.69
CTDNEP1-211ENST00000575783 MGAT4CQ9UBM8 478 aa10.72□□□□□ -0.69
CTDNEP1-211ENST00000575783 A0A087WXM4 84 aa10.71□□□□□ -0.69
CTDNEP1-211ENST00000575783 AGPAT2O15120 278 aa10.71□□□□□ -0.69
CTDNEP1-211ENST00000575783 METTL15P1P0C7V9 234 aa10.71□□□□□ -0.69
CTDNEP1-211ENST00000575783 IL18Q14116 193 aa10.71□□□□□ -0.69
CTDNEP1-211ENST00000575783 TMEM128Q5BJH2 165 aa10.71□□□□□ -0.69
CTDNEP1-211ENST00000575783 PRR9Q5T870 116 aa10.71□□□□□ -0.69
CTDNEP1-211ENST00000575783 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.69
CTDNEP1-211ENST00000575783 RAB2BQ8WUD1 216 aa10.71□□□□□ -0.69
CTDNEP1-211ENST00000575783 RBFOX3A6NFN3 312 aa10.7□□□□□ -0.7
CTDNEP1-211ENST00000575783 CTDSP2O14595 271 aa10.7□□□□□ -0.7
CTDNEP1-211ENST00000575783 CRISP2P16562 243 aa10.7□□□□□ -0.7
CTDNEP1-211ENST00000575783 SSSCA1O60232 199 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 HNRNPA3P51991 378 aaKnown RBP10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 TIRAPP58753 221 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 RPL37AP61513 92 aaKnown RBP10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 ID3Q02535 119 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 ZNF846Q147U1 533 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 ACOT6Q3I5F7 207 aaPredicted RBP10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 TDRG1Q3Y452 100 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 MUC21Q5SSG8 566 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 ZFAND2AQ8N6M9 145 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 BAALCQ8WXS3 180 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 RASL10AQ92737 203 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 MRPL53Q96EL3 112 aaKnown RBP10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 SRRQ9GZT4 340 aa10.69□□□□□ -0.7
CTDNEP1-211ENST00000575783 FNDC10F2Z333 226 aa10.68□□□□□ -0.7
CTDNEP1-211ENST00000575783 CTDSPLO15194 276 aa10.68□□□□□ -0.7
CTDNEP1-211ENST00000575783 ATP6V1G2O95670 118 aa10.68□□□□□ -0.7
CTDNEP1-211ENST00000575783 NMBP08949 121 aa10.68□□□□□ -0.7
CTDNEP1-211ENST00000575783 OR4C5Q8NGB2 326 aa10.68□□□□□ -0.7
CTDNEP1-211ENST00000575783 NAA50Q9GZZ1 169 aaKnown RBP10.68□□□□□ -0.7
CTDNEP1-211ENST00000575783 TRBV19A0A075B6N1 114 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 IGKV2-40A0A087WW87 121 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 IGHV3-16A0A0C4DH30 117 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 ZNF253O75346 499 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 IGKV2D-40P01614 121 aaPredicted RBP10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 MT1HL1P0DM35 61 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 ASIPP42127 132 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 ASAH1Q13510 395 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 TMEM78Q5T7P6 136 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 C9orf47Q6ZRZ4 202 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 DAZAP1Q96EP5 407 aaKnown RBP10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 DIRAS2Q96HU8 199 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 SMIM8Q96KF7 97 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 MGST2Q99735 147 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 TIMM9Q9Y5J7 89 aa10.67□□□□□ -0.7
CTDNEP1-211ENST00000575783 TRAV4A0A0B4J268 109 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 SFT2D2O95562 160 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 PPP1R1AQ13522 171 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 LAGE3Q14657 143 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 TMEM14EPQ6UXP3 125 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 Q6ZRG5 221 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 EXOC3-AS1Q8N2X6 119 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 SOSTQ9BQB4 213 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 PRELID1Q9Y255 219 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
CTDNEP1-211ENST00000575783 NDUFB4O95168 129 aa10.65□□□□□ -0.7
CTDNEP1-211ENST00000575783 PFN1P07737 140 aaKnown RBP10.65□□□□□ -0.7
CTDNEP1-211ENST00000575783 HIST1H1EP10412 219 aaKnown RBP10.65□□□□□ -0.7
CTDNEP1-211ENST00000575783 CTF1Q16619 201 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms