RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.11	□□□□□ -0.79
EDC4-210	ENST00000575507	IGHV4-4	A0A075B6R2	117 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	TRAV12-2	A0A075B6T6	113 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	DEFB131B	A0A096LNP1	70 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	PRAC2	D3DTV9	90 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	TEX46	H3BTG2	121 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	HMGB3	O15347	200 aa	Known RBP	10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	DUSP14	O95147	198 aa	Known RBP	10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	NBEAP1	P0C6P0	100 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	PYY	P10082	97 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	UBE2L3	P68036	154 aa	Known RBP	10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	FAM74A1	Q5RGS3	127 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	FAM222A	Q5U5X8	452 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	SSX7	Q7RTT5	188 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	ZNF680	Q8NEM1	530 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	OR8A1	Q8NGG7	326 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	SFT2D1	Q8WV19	159 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	SAT2	Q96F10	170 aa	Predicted RBP	10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	SLC50A1	Q9BRV3	221 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	TMEM167B	Q9NRX6	74 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	ZNF586	Q9NXT0	402 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	DKK2	Q9UBU2	259 aa		10.1	□□□□□ -0.79
EDC4-210	ENST00000575507	ALMS1	Q8TCU4	4167 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	TRBV19	A0A075B6N1	114 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	TRAV1-1	A0A0B4J248	108 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	OR10J4	P0C629	311 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	SPART-AS1	P0CW21	52 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	AZU1	P20160	251 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	GCHFR	P30047	84 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	TCTA	P57738	103 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	BLOC1S1	P78537	153 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	HIST1H1A	Q02539	215 aa	Predicted RBP	10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	SUN5	Q8TC36	379 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	RPUSD4	Q96CM3	377 aa	Known RBP	10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	GOLT1B	Q9Y3E0	138 aa		10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.09	□□□□□ -0.79
EDC4-210	ENST00000575507	LOC102723971	A0A1B0GUV8	181 aa		10.08	□□□□□ -0.8
EDC4-210	ENST00000575507	TMEM189	A5PLL7	270 aa		10.08	□□□□□ -0.8
EDC4-210	ENST00000575507	EIF3G	O75821	320 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
EDC4-210	ENST00000575507	HBE1	P02100	147 aa		10.08	□□□□□ -0.8
EDC4-210	ENST00000575507	KIR3DS1	Q14943	382 aa		10.08	□□□□□ -0.8
EDC4-210	ENST00000575507	LYPD1	Q8N2G4	141 aa		10.08	□□□□□ -0.8
EDC4-210	ENST00000575507	BLNK	Q8WV28	456 aa		10.08	□□□□□ -0.8
EDC4-210	ENST00000575507	PPT1	P50897	306 aa		10.07	□□□□□ -0.8
EDC4-210	ENST00000575507	FGF8	P55075	233 aa	Predicted RBP	10.07	□□□□□ -0.8
EDC4-210	ENST00000575507	RRN3P1	Q2M238	152 aa		10.07	□□□□□ -0.8
EDC4-210	ENST00000575507	IQCF2	Q8IXL9	164 aa		10.07	□□□□□ -0.8
EDC4-210	ENST00000575507	PLAC8L1	A1L4L8	177 aa		10.06	□□□□□ -0.8
EDC4-210	ENST00000575507	NDUFB4	O95168	129 aa		10.06	□□□□□ -0.8
EDC4-210	ENST00000575507	AMBP	P02760	352 aa		10.06	□□□□□ -0.8
EDC4-210	ENST00000575507	AAMDC	Q9H7C9	122 aa		10.06	□□□□□ -0.8
EDC4-210	ENST00000575507	ARL2-SNX15	V9GYD0	113 aa		10.06	□□□□□ -0.8
EDC4-210	ENST00000575507	LYPD6B	Q8NI32	183 aa		10.05	□□□□□ -0.8
EDC4-210	ENST00000575507	NIPSNAP3B	Q9BS92	247 aa		10.05	□□□□□ -0.8
EDC4-210	ENST00000575507	TMEM208	Q9BTX3	173 aa		10.05	□□□□□ -0.8
EDC4-210	ENST00000575507	NKX6-2	Q9C056	277 aa	Predicted RBP	10.05	□□□□□ -0.8
EDC4-210	ENST00000575507	PRELID1	Q9Y255	219 aa		10.05	□□□□□ -0.8
EDC4-210	ENST00000575507		A0A1W2PRE2	83 aa		10.04	□□□□□ -0.8
EDC4-210	ENST00000575507	INS	P01308	110 aa		10.04	□□□□□ -0.8
EDC4-210	ENST00000575507	RAN	P62826	216 aa	Known RBP	10.04	□□□□□ -0.8
EDC4-210	ENST00000575507	MRPL53	Q96EL3	112 aa	Known RBP	10.04	□□□□□ -0.8
EDC4-210	ENST00000575507		Q9H3A6	140 aa		10.04	□□□□□ -0.8
EDC4-210	ENST00000575507	TMPRSS5	Q9H3S3	457 aa		10.04	□□□□□ -0.8
EDC4-210	ENST00000575507	OTOR	Q9NRC9	128 aa		10.04	□□□□□ -0.8
EDC4-210	ENST00000575507	RAB14	P61106	215 aa		10.03	□□□□□ -0.8
EDC4-210	ENST00000575507	IFITM2	Q01629	132 aa		10.03	□□□□□ -0.8
EDC4-210	ENST00000575507	ARL6IP6	Q8N6S5	226 aa		10.03	□□□□□ -0.8
EDC4-210	ENST00000575507	LINC01587	Q99440	93 aa		10.03	□□□□□ -0.8
EDC4-210	ENST00000575507	MANBAL	Q9NQG1	85 aa		10.03	□□□□□ -0.8
EDC4-210	ENST00000575507		A0A1B0GV50	99 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	FAM74A7	A6NL05	159 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507		M0R3E3	92 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	IFNA1	P01562	189 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	CT45A10	P0DMU9	189 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	HTN1	P15515	57 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	HTN3	P15516	51 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	TSPO	P30536	169 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	TAGLN2	P37802	199 aa	Known RBP	10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	CDKN1B	P46527	198 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	ICAM4	Q14773	271 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	EXOC3-AS1	Q8N2X6	119 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	RXFP4	Q8TDU9	374 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	NDUFAF3	Q9BU61	184 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	PPP1R14D	Q9NXH3	145 aa		10.02	□□□□□ -0.81
EDC4-210	ENST00000575507	PGP	A6NDG6	321 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	NMB	P08949	121 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	CSN1S1	P47710	185 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	UBE2G2	P60604	165 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	DAD1	P61803	113 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	CCL20	P78556	96 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	ERCC8	Q13216	396 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	CMTM2	Q8TAZ6	248 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	TXNDC17	Q9BRA2	123 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	TCEAL7	Q9BRU2	100 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	BIRC6	Q9NR09	4857 aa		10.01	□□□□□ -0.81
EDC4-210	ENST00000575507	TEX48	A0A1B0GUV7	120 aa		10	□□□□□ -0.81
EDC4-210	ENST00000575507	NPIPB6	E9PJ23	425 aa		10	□□□□□ -0.81
EDC4-210	ENST00000575507		J3KRW8	73 aa		10	□□□□□ -0.81
EDC4-210	ENST00000575507	DEFB130B	P0DP73	79 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms