RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 BCL6BQ8N143 479 aaPredicted RBP5.22□□□□□ -1.57
SMG6-217ENST00000575338 TMEM256Q8N2U0 113 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 FER1L6-AS1Q8NA97 138 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 ZNF738Q8NE65 137 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 UBE2E2Q96LR5 201 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 PSMG3-AS1Q96PY0 264 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 ALKBH7Q9BT30 221 aaPredicted RBP5.22□□□□□ -1.57
SMG6-217ENST00000575338 ZNF462Q96JM2 2506 aa5.22□□□□□ -1.57
SMG6-217ENST00000575338 MAST4O15021 2626 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 IGHV3OR16-8A0A075B7F1 116 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 TRAV21A0A0B4J279 112 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 C20orf202A1L168 122 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 LGALS9O00182 355 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 IGHV3-11P01762 117 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 PPBPP02775 128 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 LGALS1P09382 135 aaKnown RBP5.21□□□□□ -1.58
SMG6-217ENST00000575338 PLA2G2AP14555 144 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 RPL11P62913 178 aaKnown RBP5.21□□□□□ -1.58
SMG6-217ENST00000575338 CACNG7P62955 275 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 PMCHL1Q16048 86 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 KIAA1644Q3SXP7 199 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 IL17RELQ6ZVW7 336 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 RNF152Q8N8N0 203 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 WFDC12Q8WWY7 111 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 C8orf49Q96NF6 230 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 VGLL1Q99990 258 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 RHPN1-AS1Q9BWJ2 59 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 SMPXQ9UHP9 88 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 NAGKQ9UJ70 344 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 LAMTOR2Q9Y2Q5 125 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 TACC2O95359 2948 aa5.21□□□□□ -1.58
SMG6-217ENST00000575338 UBR5O95071 2799 aaPredicted RBP5.2□□□□□ -1.58
SMG6-217ENST00000575338 TRAV8-2A0A0B4J237 113 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 IGHV3-66A0A0C4DH42 116 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 ZNF705FA8MVS1 300 aaPredicted RBP5.2□□□□□ -1.58
SMG6-217ENST00000575338 M0R2Z0 102 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 HOXA3O43365 443 aaPredicted RBP5.2□□□□□ -1.58
SMG6-217ENST00000575338 ZNF207O43670 478 aaKnown RBP5.2□□□□□ -1.58
SMG6-217ENST00000575338 APOHP02749 345 aaPredicted RBP5.2□□□□□ -1.58
SMG6-217ENST00000575338 ARMS2P0C7Q2 107 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 ZNF705DP0CH99 300 aaPredicted RBP5.2□□□□□ -1.58
SMG6-217ENST00000575338 ZNF705BP0CI00 300 aaPredicted RBP5.2□□□□□ -1.58
SMG6-217ENST00000575338 CRIP1P50238 77 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 SNRPD3P62318 126 aaKnown RBP5.2□□□□□ -1.58
SMG6-217ENST00000575338 RNASEKQ6P5S7 137 aaKnown RBP5.2□□□□□ -1.58
SMG6-217ENST00000575338 ORMDL3Q8N138 153 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 Q8N2B8 174 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 FOXC2Q99958 501 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 TPPP3Q9BW30 176 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 CNFNQ9BYD5 112 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 KLK15Q9H2R5 256 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 PEMTQ9UBM1 199 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 HSPB8Q9UJY1 196 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 TP53TG3Q9ULZ0 132 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 PTPN13Q12923 2485 aa5.2□□□□□ -1.58
SMG6-217ENST00000575338 CFAP46Q8IYW2 2715 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 IGHV3OR16-13A0A075B7E8 117 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 IGHV3-49A0A0A0MS15 119 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 IGHV3-74A0A0B4J1X5 117 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 FRMD6-AS1P0C7T7 363 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 LINC00614P0C842 121 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 IGLC6P0CF74 106 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 MED14OSP0DP75 135 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 NTF3P20783 257 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 KRTAP10-9P60411 292 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 DEFA6Q01524 100 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 TWIST1Q15672 202 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 TM4SF20Q53R12 229 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 FAM104BQ5XKR9 115 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 LYZL1Q6UWQ5 148 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 UNQ9165/PRO28630Q6UXU0 137 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 FA2HQ7L5A8 372 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 NIT1Q86X76 327 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 RNF182Q8N6D2 247 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 Q8TAT8 98 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 MYOZ3Q8TDC0 251 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 ODF3Q96PU9 254 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 VAMP8Q9BV40 100 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 SSBP4Q9BWG4 385 aaPredicted RBP5.19□□□□□ -1.58
SMG6-217ENST00000575338 TMEM191AQ9H0A3 160 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 AGPAT4-IT1Q9H0P7 198 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 ZNF702PQ9H963 129 aa5.19□□□□□ -1.58
SMG6-217ENST00000575338 USP9XQ93008 2570 aaPredicted RBP5.19□□□□□ -1.58
SMG6-217ENST00000575338 TMSB15BA0A087X1C1 80 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 TRAV2A0A0B4J234 112 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 SOCS3O14543 225 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 SMAD7O15105 426 aaKnown RBP5.18□□□□□ -1.58
SMG6-217ENST00000575338 DUSP14O95147 198 aaKnown RBP5.18□□□□□ -1.58
SMG6-217ENST00000575338 LEPROTL1O95214 131 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 TRBV12-3P01733 135 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 BTF3P20290 206 aaKnown RBP5.18□□□□□ -1.58
SMG6-217ENST00000575338 HLA-DMBP28068 263 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 TSPOP30536 169 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 LEPP41159 167 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 LINC00310P59036 64 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 KRTDAPP60985 99 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 LBHQ53QV2 105 aaPredicted RBP5.18□□□□□ -1.58
SMG6-217ENST00000575338 GDF5OSQ5U4N7 250 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 IGFL4Q6B9Z1 124 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 KLHDC1Q8N7A1 406 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms