RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 PLA2G12AQ9BZM1 189 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 TMEM191AQ9H0A3 160 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 TCEAL2Q9H3H9 227 aaPredicted RBP2.28□□□□□ -2.04
NUP88-209ENST00000574855 BANF2Q9H503 90 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 RERGLQ9H628 205 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 IL36BQ9NZH7 164 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 ABRACLQ9P1F3 81 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 METTL1Q9UBP6 276 aaKnown RBP2.28□□□□□ -2.04
NUP88-209ENST00000574855 ZNF835Q9Y2P0 537 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 IER3IP1Q9Y5U9 82 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 TMEM14AQ9Y6G1 99 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 ALPK3Q96L96 1907 aa2.28□□□□□ -2.04
NUP88-209ENST00000574855 TRPM6Q9BX84 2022 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 IGHV3-43A0A0B4J1X8 118 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 TRAV13-1A0A0B4J241 112 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 IGKV1-9A0A0C4DH69 117 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 IGHV7-4-1A0A0J9YVY3 117 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 A0A1W2PQD3 144 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 NAP1L6A6NFF2 107 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 H3BMG7 143 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 CDC42EP2O14613 210 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 RTL8CO15255 209 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 IGHV4-34P06331 123 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 CD14P08571 375 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 CRYBB3P26998 211 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 TAS2R45P59539 299 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 S100A10P60903 97 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 GNB2P62879 340 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 PLGLB1Q02325 96 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 HES1Q14469 280 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 ZNF791Q3KP31 576 aaPredicted RBP2.27□□□□□ -2.05
NUP88-209ENST00000574855 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 RPS19BP1Q86WX3 136 aaKnown RBP2.27□□□□□ -2.05
NUP88-209ENST00000574855 SAXO1Q8IYX7 474 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 TOMM5Q8N4H5 51 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 FER1L6-AS1Q8NA97 138 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 PLPP5Q8NEB5 264 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 PFN4Q8NHR9 129 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 LINC01006Q8NI28 216 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 PATE1Q8WXA2 126 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 RMI2Q96E14 147 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 FAM60AQ9NP50 221 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 ANAPC11Q9NYG5 84 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 FUT9Q9Y231 359 aa2.27□□□□□ -2.05
NUP88-209ENST00000574855 KLK5Q9Y337 293 aaPredicted RBP2.27□□□□□ -2.05
NUP88-209ENST00000574855 GOLGB1Q14789 3259 aaKnown RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 NUP214P35658 2090 aaPredicted RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 TRAV27A0A087WT01 109 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 IGHV3-49A0A0A0MS15 119 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 IGHV5-51A0A0C4DH38 117 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 IGHV5-10-1A0A0J9YXX1 117 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 A0A1B0GVX0 72 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 A0A1B0GW54 56 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 C7orf71A4D174 169 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 A8MWL6 223 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 C10orf142B7Z368 130 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 FNDC10F2Z333 226 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 J3QRE1 110 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 LYRM1O43325 122 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 UBL3O95164 117 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 KRASP01116 189 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 TCRAP04437 139 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 CGB3P0DN86 165 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 CGB7P0DN87 165 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 HIST1H1DP16402 221 aaKnown RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 FAUP35544 74 aaKnown RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 ZNF93P35789 620 aaPredicted RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 CSN1S1P47710 185 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 UBE2AP49459 152 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 KRTAP10-8P60410 259 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 UBE2BP63146 152 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 BTG2P78543 158 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 QRFPP83859 136 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 CDK5R1Q15078 307 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 DEFB133Q30KQ1 61 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 DEFB110Q30KQ9 67 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 LINC01554Q52M75 96 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 PHF5AQ7RTV0 110 aaKnown RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 SPATA12Q7Z6I5 190 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 TMEM256Q8N2U0 113 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 ZNF525Q8N782 197 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 C5orf17Q8NAS9 161 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 OR5AK2Q8NH90 309 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 S100A16Q96FQ6 103 aaKnown RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 DPH3Q96FX2 82 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 ADAT1Q9BUB4 502 aaKnown RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 MRPL32Q9BYC8 188 aaKnown RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 TAS2R8Q9NYW2 309 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 V9GYH0 126 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 TANC2Q9HCD6 1990 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 NUMA1Q14980 2115 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 MUC22E2RYF6 1773 aaPredicted RBP2.26□□□□□ -2.05
NUP88-209ENST00000574855 DOCK8Q8NF50 2099 aa2.26□□□□□ -2.05
NUP88-209ENST00000574855 SVILO95425 2214 aa2.25□□□□□ -2.05
NUP88-209ENST00000574855 PTPRSQ13332 1948 aa2.25□□□□□ -2.05
NUP88-209ENST00000574855 A0A0G2JMM0 328 aa2.25□□□□□ -2.05
NUP88-209ENST00000574855 A0A1W2PPB8 328 aa2.25□□□□□ -2.05
NUP88-209ENST00000574855 KIR3DP1A8MWS1 328 aa2.25□□□□□ -2.05
NUP88-209ENST00000574855 A8MWV9 139 aa2.25□□□□□ -2.05
NUP88-209ENST00000574855 K7ERJ3 54 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms