RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 CSN1S1P47710 185 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 TAS2R60P59551 318 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 KCNRGQ8N5I3 272 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 RPP25LQ8N5L8 163 aaKnown RBP7.02□□□□□ -1.29
NDE1-210ENST00000574163 Q9H3A6 140 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 OTORQ9NRC9 128 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 CELA1Q9UNI1 258 aa7.02□□□□□ -1.29
NDE1-210ENST00000574163 TRAV12-2A0A075B6T6 113 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 A0A0D9SG52 128 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 KLLNB2CW77 178 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 H7BYZ3 331 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 SPART-AS1P0CW21 52 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 CT45A10P0DMU9 189 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 TCTAP57738 103 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 FAM74A1Q5RGS3 127 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 TMEM78Q5T7P6 136 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 GFI1BQ5VTD9 330 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 ZNF493Q6ZR52 646 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 SUN5Q8TC36 379 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 RXFP4Q8TDU9 374 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 RAB24Q969Q5 203 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 FAM19A4Q96LR4 140 aa7.01□□□□□ -1.29
NDE1-210ENST00000574163 ACTR3CQ9C0K3 210 aaPredicted RBP7.01□□□□□ -1.29
NDE1-210ENST00000574163 IGKV2-40A0A087WW87 121 aaPredicted RBP7□□□□□ -1.29
NDE1-210ENST00000574163 TRAV10A0A0B4J240 114 aa7□□□□□ -1.29
NDE1-210ENST00000574163 LYRM9A8MSI8 78 aa7□□□□□ -1.29
NDE1-210ENST00000574163 SMLR1H3BR10 107 aa7□□□□□ -1.29
NDE1-210ENST00000574163 CXorf1O96002 111 aa7□□□□□ -1.29
NDE1-210ENST00000574163 IGKV2D-40P01614 121 aaPredicted RBP7□□□□□ -1.29
NDE1-210ENST00000574163 GCHFRP30047 84 aa7□□□□□ -1.29
NDE1-210ENST00000574163 RANP62826 216 aaKnown RBP7□□□□□ -1.29
NDE1-210ENST00000574163 AKR1C8PQ5T2L2 129 aa7□□□□□ -1.29
NDE1-210ENST00000574163 Q6ZNX1 250 aa7□□□□□ -1.29
NDE1-210ENST00000574163 Q6ZTC4 211 aa7□□□□□ -1.29
NDE1-210ENST00000574163 TCTE3Q8IZS6 198 aa7□□□□□ -1.29
NDE1-210ENST00000574163 TMEM263Q8WUH6 116 aaKnown RBP7□□□□□ -1.29
NDE1-210ENST00000574163 TMED6Q8WW62 240 aa7□□□□□ -1.29
NDE1-210ENST00000574163 C16orf74Q96GX8 76 aa7□□□□□ -1.29
NDE1-210ENST00000574163 ARPC5LQ9BPX5 153 aa7□□□□□ -1.29
NDE1-210ENST00000574163 AGPAT4-IT1Q9H0P7 198 aa7□□□□□ -1.29
NDE1-210ENST00000574163 CYTL1Q9NRR1 136 aa7□□□□□ -1.29
NDE1-210ENST00000574163 TMEM167BQ9NRX6 74 aa7□□□□□ -1.29
NDE1-210ENST00000574163 DKK2Q9UBU2 259 aa7□□□□□ -1.29
NDE1-210ENST00000574163 YTHDF2Q9Y5A9 579 aaKnown RBP7□□□□□ -1.29
NDE1-210ENST00000574163 LENEPQ9Y5L5 61 aa7□□□□□ -1.29
NDE1-210ENST00000574163 CTXND1A0A1B0GTU2 59 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 SERTM2A0A1B0GWG4 89 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 C7orf71A4D174 169 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 ZNF705GA8MUZ8 300 aaPredicted RBP6.99□□□□□ -1.29
NDE1-210ENST00000574163 DIRC3C9JPN6 131 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 BCL2L11O43521 198 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 ZNF138P52744 262 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 EIF5AP63241 154 aaKnown RBP6.99□□□□□ -1.29
NDE1-210ENST00000574163 ERCC8Q13216 396 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 C12orf74Q32Q52 190 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 FAM222AQ5U5X8 452 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 C5orf17Q8NAS9 161 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 OR11H4Q8NGC9 324 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 CMTM2Q8TAZ6 248 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
NDE1-210ENST00000574163 C2CD4CQ8TF44 421 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 LINC01587Q99440 93 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 PYGO2Q9BRQ0 406 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 LINC00467Q9BRT7 94 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 NIPSNAP3BQ9BS92 247 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 ZNF492Q9P255 531 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 DNAH1Q9P2D7 4330 aa6.99□□□□□ -1.29
NDE1-210ENST00000574163 KANTRA0A1W2PQU2 76 aa6.98□□□□□ -1.29
NDE1-210ENST00000574163 PLAC8L1A1L4L8 177 aa6.98□□□□□ -1.29
NDE1-210ENST00000574163 PRB4P10163 310 aaPredicted RBP6.98□□□□□ -1.29
NDE1-210ENST00000574163 EMP1P54849 157 aa6.98□□□□□ -1.29
NDE1-210ENST00000574163 LINC00476Q8WZB0 136 aa6.98□□□□□ -1.29
NDE1-210ENST00000574163 ANAPC16Q96DE5 110 aa6.98□□□□□ -1.29
NDE1-210ENST00000574163 ST6GAL2Q96JF0 529 aa6.98□□□□□ -1.29
NDE1-210ENST00000574163 FAM210BQ96KR6 192 aa6.98□□□□□ -1.29
NDE1-210ENST00000574163 VGLL1Q99990 258 aa6.98□□□□□ -1.29
NDE1-210ENST00000574163 PGPA6NDG6 321 aa6.97□□□□□ -1.29
NDE1-210ENST00000574163 UMAD1C9J7I0 102 aa6.97□□□□□ -1.29
NDE1-210ENST00000574163 HMGB3O15347 200 aaKnown RBP6.97□□□□□ -1.29
NDE1-210ENST00000574163 EIF3GO75821 320 aaKnown RBP eCLIP6.97□□□□□ -1.29
NDE1-210ENST00000574163 SEC11BP0C7V7 166 aa6.97□□□□□ -1.29
NDE1-210ENST00000574163 KIR3DS1Q14943 382 aa6.97□□□□□ -1.29
NDE1-210ENST00000574163 ZNF726P1Q15940 193 aa6.97□□□□□ -1.29
NDE1-210ENST00000574163 CCDC28AQ8IWP9 274 aa6.97□□□□□ -1.29
NDE1-210ENST00000574163 ZNF680Q8NEM1 530 aa6.97□□□□□ -1.29
NDE1-210ENST00000574163 Q8TAT8 98 aa6.97□□□□□ -1.29
NDE1-210ENST00000574163 STOML3Q8TAV4 291 aa6.97□□□□□ -1.29
NDE1-210ENST00000574163 TIMM8BQ9Y5J9 83 aaPredicted RBP6.97□□□□□ -1.29
NDE1-210ENST00000574163 DEFB131BA0A096LNP1 70 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 TRAV12-3A0A0B4J271 114 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 A0A1W2PRE2 83 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 FBLL1A6NHQ2 334 aaKnown RBP6.96□□□□□ -1.3
NDE1-210ENST00000574163 GGTLC3B5MD39 225 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 ZNF324O75467 553 aaPredicted RBP6.96□□□□□ -1.3
NDE1-210ENST00000574163 GPX1P07203 203 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 AZU1P20160 251 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 DAD1P61803 113 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 BTN1A1Q13410 526 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 DPPA3Q6W0C5 159 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms