RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 CASC2Q6XLA1 102 aa1□□□□□ -2.25
CHD3-217ENST00000574022 ZNF833PQ6ZTB9 187 aa1□□□□□ -2.25
CHD3-217ENST00000574022 GKN2Q86XP6 184 aa1□□□□□ -2.25
CHD3-217ENST00000574022 LINC00269Q8N2A0 174 aa1□□□□□ -2.25
CHD3-217ENST00000574022 OTOSQ8NHW6 89 aa1□□□□□ -2.25
CHD3-217ENST00000574022 Q8TAT8 98 aa1□□□□□ -2.25
CHD3-217ENST00000574022 ZNF431Q8TF32 576 aaPredicted RBP1□□□□□ -2.25
CHD3-217ENST00000574022 PSMF1Q92530 271 aa1□□□□□ -2.25
CHD3-217ENST00000574022 Q96M85 177 aa1□□□□□ -2.25
CHD3-217ENST00000574022 CGREF1Q99674 301 aa1□□□□□ -2.25
CHD3-217ENST00000574022 LINC00470Q9BZP3 86 aa1□□□□□ -2.25
CHD3-217ENST00000574022 DNAJC15Q9Y5T4 150 aa1□□□□□ -2.25
CHD3-217ENST00000574022 CHCHD2Q9Y6H1 151 aaPredicted RBP1□□□□□ -2.25
CHD3-217ENST00000574022 LAMB2P55268 1798 aa1□□□□□ -2.25
CHD3-217ENST00000574022 POLEQ07864 2286 aa1□□□□□ -2.25
CHD3-217ENST00000574022 COL4A4P53420 1690 aaPredicted RBP1□□□□□ -2.25
CHD3-217ENST00000574022 WDR97A6NE52 1622 aa1□□□□□ -2.25
CHD3-217ENST00000574022 NUMA1Q14980 2115 aa1□□□□□ -2.25
CHD3-217ENST00000574022 MPDZO75970 2070 aa1□□□□□ -2.25
CHD3-217ENST00000574022 PTPRGP23470 1445 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 ROCK2O75116 1388 aaKnown RBP0.99□□□□□ -2.25
CHD3-217ENST00000574022 IBTKQ9P2D0 1353 aaPredicted RBP0.99□□□□□ -2.25
CHD3-217ENST00000574022 LAMB4A4D0S4 1761 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 MYO9BQ13459 2157 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 TRBV6-8A0A0A6YYG3 113 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 LOC107984156A0A0G2JMH3 177 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 FAM92AA1XBS5 289 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 KRTAP9-6A8MVA2 160 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 FAM25AB3EWG3 89 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 FAM25CB3EWG5 89 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 FAM25GB3EWG6 89 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 ZNF736B4DX44 427 aaPredicted RBP0.99□□□□□ -2.25
CHD3-217ENST00000574022 DLEU1O43261 78 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 YPEL1O60688 119 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 EDF1O60869 148 aaKnown RBP0.99□□□□□ -2.25
CHD3-217ENST00000574022 HYPMO75409 117 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 CD3DP04234 171 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 GUCA1AP43080 201 aaPredicted RBP0.99□□□□□ -2.25
CHD3-217ENST00000574022 EMX2Q04743 252 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 ASB16-AS1Q495Z4 193 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 CLLU1Q5K131 121 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 FAM74A1Q5RGS3 127 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 TEX261Q6UWH6 196 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 IZUMO2Q6UXV1 221 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 ARL17AQ8IVW1 177 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 C10orf111Q8N326 155 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 FAM19A2Q8N3H0 131 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 MICAL3Q7RTP6 2002 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 PLXNA4Q9HCM2 1894 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 FOCADQ5VW36 1801 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 KIAA1549LQ6ZVL6 1849 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 SPEF2Q9C093 1822 aa0.99□□□□□ -2.25
CHD3-217ENST00000574022 SDK2Q58EX2 2172 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 RGS12O14924 1447 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 FGD6Q6ZV73 1430 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 SMG6Q86US8 1419 aaKnown RBP0.98□□□□□ -2.25
CHD3-217ENST00000574022 COL5A3P25940 1745 aaPredicted RBP0.98□□□□□ -2.25
CHD3-217ENST00000574022 TMEM2Q9UHN6 1383 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 ZFC3H1O60293 1989 aaKnown RBP0.98□□□□□ -2.25
CHD3-217ENST00000574022 TRBV20-1A0A075B6N2 111 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 IGHV1-24A0A0C4DH33 117 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 IFITM5A6NNB3 132 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 F8W1H4 67 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 M0R129 80 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 APOC1P02654 83 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 RNASE3P12724 160 aaKnown RBP0.98□□□□□ -2.25
CHD3-217ENST00000574022 KRTAP10-10P60014 251 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 PLGLB1Q02325 96 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 MIR22HGQ0VDD5 57 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 FOXI2Q6ZQN5 318 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 Q6ZRN7 208 aaPredicted RBP0.98□□□□□ -2.25
CHD3-217ENST00000574022 ZCCHC23Q6ZST2 131 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 ATOH7Q8N100 152 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 PATE1Q8WXA2 126 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 LINC00052Q96N35 136 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 CIB3Q96Q77 187 aaPredicted RBP0.98□□□□□ -2.25
CHD3-217ENST00000574022 SMIM7Q9BQ49 75 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 C2orf88Q9BSF0 95 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 REG4Q9BYZ8 158 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 TMEM191AQ9H0A3 160 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 ORMDL1Q9P0S3 153 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 KLK9Q9UKQ9 250 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 LSM2Q9Y333 95 aaKnown RBP0.98□□□□□ -2.25
CHD3-217ENST00000574022 MPC1Q9Y5U8 109 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 BRWD1Q9NSI6 2320 aa0.98□□□□□ -2.25
CHD3-217ENST00000574022 TANC2Q9HCD6 1990 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 RIMS1Q86UR5 1692 aaKnown RBP0.97□□□□□ -2.25
CHD3-217ENST00000574022 TRGV2A0A075B6R0 118 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 A0A0G2JMM0 328 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 A0A1W2PPB8 328 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 A6NN06 94 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 BBIP1A8MTZ0 92 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 KIR3DP1A8MWS1 328 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 CDC42EP2O14613 210 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 CCL16O15467 120 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 IGF2P01344 180 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 COX7CP15954 63 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 KRTAP10-1P60331 282 aa0.97□□□□□ -2.25
CHD3-217ENST00000574022 CNBPP62633 177 aaKnown RBP0.97□□□□□ -2.25
CHD3-217ENST00000574022 DEFB103AP81534 67 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms