RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 NIPSNAP3BQ9BS92 247 aa19.74■□□□□ 0.75
SCARF1-207ENST00000573867 A0A1W2PPV4 95 aa19.73■□□□□ 0.75
SCARF1-207ENST00000573867 HTN1P15515 57 aa19.73■□□□□ 0.75
SCARF1-207ENST00000573867 LINC00477Q96M19 166 aa19.73■□□□□ 0.75
SCARF1-207ENST00000573867 C20orf144Q9BQM9 153 aa19.73■□□□□ 0.75
SCARF1-207ENST00000573867 TRAV12-3A0A0B4J271 114 aa19.72■□□□□ 0.75
SCARF1-207ENST00000573867 H7BYZ3 331 aa19.72■□□□□ 0.75
SCARF1-207ENST00000573867 LYPD1Q8N2G4 141 aa19.72■□□□□ 0.75
SCARF1-207ENST00000573867 KMT2AQ03164 3969 aa19.71■□□□□ 0.75
SCARF1-207ENST00000573867 IGHV4-4A0A075B6R2 117 aa19.71■□□□□ 0.75
SCARF1-207ENST00000573867 TEX48A0A1B0GUV7 120 aa19.71■□□□□ 0.75
SCARF1-207ENST00000573867 ARPC5O15511 151 aa19.71■□□□□ 0.75
SCARF1-207ENST00000573867 KLLNB2CW77 178 aa19.7■□□□□ 0.74
SCARF1-207ENST00000573867 CDC34P49427 236 aaPredicted RBP19.7■□□□□ 0.74
SCARF1-207ENST00000573867 CD300CQ08708 224 aa19.7■□□□□ 0.74
SCARF1-207ENST00000573867 PRR9Q5T870 116 aa19.7■□□□□ 0.74
SCARF1-207ENST00000573867 PQLC2Q6ZP29 291 aa19.7■□□□□ 0.74
SCARF1-207ENST00000573867 RNASE8Q8TDE3 154 aaKnown RBP19.7■□□□□ 0.74
SCARF1-207ENST00000573867 ARL14EPLP0DKL9 152 aa19.69■□□□□ 0.74
SCARF1-207ENST00000573867 SERF2P84101 59 aa19.69■□□□□ 0.74
SCARF1-207ENST00000573867 BTN1A1Q13410 526 aa19.69■□□□□ 0.74
SCARF1-207ENST00000573867 SSX7Q7RTT5 188 aa19.69■□□□□ 0.74
SCARF1-207ENST00000573867 ZFAND2AQ8N6M9 145 aa19.69■□□□□ 0.74
SCARF1-207ENST00000573867 Q8TAT8 98 aa19.69■□□□□ 0.74
SCARF1-207ENST00000573867 RAB24Q969Q5 203 aa19.69■□□□□ 0.74
SCARF1-207ENST00000573867 CYTL1Q9NRR1 136 aa19.69■□□□□ 0.74
SCARF1-207ENST00000573867 ZNF492Q9P255 531 aa19.69■□□□□ 0.74
SCARF1-207ENST00000573867 SLC25A5P05141 298 aaKnown RBP19.68■□□□□ 0.74
SCARF1-207ENST00000573867 STAG3L2P0CL84 134 aa19.68■□□□□ 0.74
SCARF1-207ENST00000573867 STAG3L3P0CL85 134 aa19.68■□□□□ 0.74
SCARF1-207ENST00000573867 CRISP2P16562 243 aa19.68■□□□□ 0.74
SCARF1-207ENST00000573867 TCTAP57738 103 aa19.68■□□□□ 0.74
SCARF1-207ENST00000573867 LGALS9CQ6DKI2 356 aa19.68■□□□□ 0.74
SCARF1-207ENST00000573867 C16orf74Q96GX8 76 aa19.68■□□□□ 0.74
SCARF1-207ENST00000573867 C7orf71A4D174 169 aa19.67■□□□□ 0.74
SCARF1-207ENST00000573867 LYRM9A8MSI8 78 aa19.67■□□□□ 0.74
SCARF1-207ENST00000573867 DAD1P61803 113 aa19.67■□□□□ 0.74
SCARF1-207ENST00000573867 TMEM78Q5T7P6 136 aa19.67■□□□□ 0.74
SCARF1-207ENST00000573867 OR11H4Q8NGC9 324 aa19.67■□□□□ 0.74
SCARF1-207ENST00000573867 TMEM263Q8WUH6 116 aaKnown RBP19.67■□□□□ 0.74
SCARF1-207ENST00000573867 BORCS7-ASMTA0A0B4J1R7 106 aa19.66■□□□□ 0.74
SCARF1-207ENST00000573867 ZNF324O75467 553 aaPredicted RBP19.66■□□□□ 0.74
SCARF1-207ENST00000573867 Q6ZQT7 251 aa19.66■□□□□ 0.74
SCARF1-207ENST00000573867 GNPNAT1Q96EK6 184 aaPredicted RBP19.66■□□□□ 0.74
SCARF1-207ENST00000573867 HYLS1Q96M11 299 aa19.66■□□□□ 0.74
SCARF1-207ENST00000573867 OTORQ9NRC9 128 aa19.66■□□□□ 0.74
SCARF1-207ENST00000573867 PGPA6NDG6 321 aa19.65■□□□□ 0.74
SCARF1-207ENST00000573867 DIRC3C9JPN6 131 aa19.65■□□□□ 0.74
SCARF1-207ENST00000573867 MBP02144 154 aa19.65■□□□□ 0.74
SCARF1-207ENST00000573867 HTN3P15516 51 aa19.65■□□□□ 0.74
SCARF1-207ENST00000573867 CSN1S1P47710 185 aa19.65■□□□□ 0.74
SCARF1-207ENST00000573867 ZNF138P52744 262 aa19.65■□□□□ 0.74
SCARF1-207ENST00000573867 ZNF493Q6ZR52 646 aa19.65■□□□□ 0.74
SCARF1-207ENST00000573867 RBAKDNA6NC62 111 aa19.64■□□□□ 0.73
SCARF1-207ENST00000573867 RNASE4P34096 147 aaKnown RBP19.64■□□□□ 0.73
SCARF1-207ENST00000573867 ZNF726P1Q15940 193 aa19.64■□□□□ 0.73
SCARF1-207ENST00000573867 DEFB130BP0DP73 79 aa19.63■□□□□ 0.73
SCARF1-207ENST00000573867 DEFB130AP0DP74 79 aa19.63■□□□□ 0.73
SCARF1-207ENST00000573867 GCHFRP30047 84 aa19.63■□□□□ 0.73
SCARF1-207ENST00000573867 SUN5Q8TC36 379 aa19.63■□□□□ 0.73
SCARF1-207ENST00000573867 PYGO2Q9BRQ0 406 aa19.63■□□□□ 0.73
SCARF1-207ENST00000573867 NOP10Q9NPE3 64 aaKnown RBP19.63■□□□□ 0.73
SCARF1-207ENST00000573867 DNAH6Q9C0G6 4158 aa19.62■□□□□ 0.73
SCARF1-207ENST00000573867 NMBP08949 121 aa19.62■□□□□ 0.73
SCARF1-207ENST00000573867 RPH3ALQ9UNE2 315 aa19.62■□□□□ 0.73
SCARF1-207ENST00000573867 TIMM8BQ9Y5J9 83 aaPredicted RBP19.62■□□□□ 0.73
SCARF1-207ENST00000573867 TAAR5O14804 337 aa19.61■□□□□ 0.73
SCARF1-207ENST00000573867 GPX1P07203 203 aa19.61■□□□□ 0.73
SCARF1-207ENST00000573867 GNG5P63218 68 aa19.61■□□□□ 0.73
SCARF1-207ENST00000573867 KCNRGQ8N5I3 272 aa19.61■□□□□ 0.73
SCARF1-207ENST00000573867 RXFP4Q8TDU9 374 aa19.61■□□□□ 0.73
SCARF1-207ENST00000573867 ACTR3CQ9C0K3 210 aaPredicted RBP19.61■□□□□ 0.73
SCARF1-207ENST00000573867 CCDC28AQ8IWP9 274 aa19.6■□□□□ 0.73
SCARF1-207ENST00000573867 LINC00467Q9BRT7 94 aa19.59■□□□□ 0.73
SCARF1-207ENST00000573867 NDUFAF3Q9BU61 184 aa19.59■□□□□ 0.73
SCARF1-207ENST00000573867 EPPK1P58107 5090 aaKnown RBP19.58■□□□□ 0.73
SCARF1-207ENST00000573867 TRBV7-9A0A0J9YWB2 115 aa19.58■□□□□ 0.72
SCARF1-207ENST00000573867 ZNF345Q14585 488 aa19.58■□□□□ 0.72
SCARF1-207ENST00000573867 GOLT1AQ6ZVE7 132 aa19.58■□□□□ 0.72
SCARF1-207ENST00000573867 CMTM2Q8TAZ6 248 aa19.58■□□□□ 0.72
SCARF1-207ENST00000573867 HMSDA8MTL9 139 aa19.57■□□□□ 0.72
SCARF1-207ENST00000573867 CXorf1O96002 111 aa19.57■□□□□ 0.72
SCARF1-207ENST00000573867 TMEM88Q6PEY1 159 aa19.57■□□□□ 0.72
SCARF1-207ENST00000573867 LINC00612Q8N6U2 182 aa19.57■□□□□ 0.72
SCARF1-207ENST00000573867 C11orf72Q8NBR9 251 aa19.57■□□□□ 0.72
SCARF1-207ENST00000573867 TRAV8-1A0A0A6YYK1 113 aa19.56■□□□□ 0.72
SCARF1-207ENST00000573867 FAM74A1Q5RGS3 127 aa19.56■□□□□ 0.72
SCARF1-207ENST00000573867 ARL6IP6Q8N6S5 226 aa19.56■□□□□ 0.72
SCARF1-207ENST00000573867 ST6GAL2Q96JF0 529 aa19.56■□□□□ 0.72
SCARF1-207ENST00000573867 ARPC5LQ9BPX5 153 aa19.56■□□□□ 0.72
SCARF1-207ENST00000573867 TP53TG3Q9ULZ0 132 aa19.56■□□□□ 0.72
SCARF1-207ENST00000573867 DNAH10Q8IVF4 4471 aa19.56■□□□□ 0.72
SCARF1-207ENST00000573867 GGTLC3B5MD39 225 aa19.55■□□□□ 0.72
SCARF1-207ENST00000573867 EIF4E3Q8N5X7 224 aaKnown RBP19.55■□□□□ 0.72
SCARF1-207ENST00000573867 TVP23CQ96ET8 276 aa19.55■□□□□ 0.72
SCARF1-207ENST00000573867 FAM210BQ96KR6 192 aa19.55■□□□□ 0.72
SCARF1-207ENST00000573867 CTXND1A0A1B0GTU2 59 aa19.54■□□□□ 0.72
SCARF1-207ENST00000573867 CBY3A6NI87 242 aa19.54■□□□□ 0.72
SCARF1-207ENST00000573867 ANXA2RQ3ZCQ2 193 aa19.54■□□□□ 0.72
SCARF1-207ENST00000573867 TMED6Q8WW62 240 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms