RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 LRRC37A5PQ49AS3 106 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 FAM222AQ5U5X8 452 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 SAT2Q96F10 170 aaPredicted RBP5.3□□□□□ -1.56
NUP88-205ENST00000572809 NIPSNAP3BQ9BS92 247 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 YTHDF2Q9Y5A9 579 aaKnown RBP5.3□□□□□ -1.56
NUP88-205ENST00000572809 PXMP4Q9Y6I8 212 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 RYR2Q92736 4967 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 TRAV12-2A0A075B6T6 113 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 BOLA2-SMG1P6H3BVE0 249 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 SSNA1O43805 119 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 MPDU1O75352 247 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 INSP01308 110 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 PRM2P04554 102 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 IGLC2P0DOY2 106 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 OXA1LQ15070 435 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 BAP18Q8IXM2 172 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 OR5C1Q8NGR4 320 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 LINC01587Q99440 93 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 NDUFAF3Q9BU61 184 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 OR5AC2Q9NZP5 309 aa5.29□□□□□ -1.56
NUP88-205ENST00000572809 PLECQ15149 4684 aaKnown RBP5.28□□□□□ -1.56
NUP88-205ENST00000572809 PRAC2D3DTV9 90 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 SLC17A3O00476 420 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 HIST1H1EP10412 219 aaKnown RBP5.28□□□□□ -1.56
NUP88-205ENST00000572809 HTN1P15515 57 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 AZU1P20160 251 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 CDKN1BP46527 198 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 H2BFSP57053 126 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 DAD1P61803 113 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 TMEM256Q8N2U0 113 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 OR10J6PQ8NGY7 276 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 PPP1R1CQ8WVI7 109 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 FAM210BQ96KR6 192 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 NPCDR1Q9BY65 106 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 ZNF586Q9NXT0 402 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 TMEM14CQ9P0S9 112 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 ALMS1Q8TCU4 4167 aa5.28□□□□□ -1.56
NUP88-205ENST00000572809 TRBV19A0A075B6N1 114 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 LYRM9A8MSI8 78 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 ZNF253O75346 499 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 MPC2O95563 127 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 P0DMU3 169 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 FAM231AP0DMU4 169 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 FAM231CP0DMU5 169 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 HTN3P15516 51 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 TSPOP30536 169 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 TAS2R60P59551 318 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 FOXI1Q12951 378 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 CLINT1Q14677 625 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 GCSAMLQ5JQS6 135 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 THAP6Q8TBB0 222 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 DAZAP1Q96EP5 407 aaKnown RBP5.27□□□□□ -1.57
NUP88-205ENST00000572809 WDR61Q9GZS3 305 aaKnown RBP5.27□□□□□ -1.57
NUP88-205ENST00000572809 TIMM9Q9Y5J7 89 aa5.27□□□□□ -1.57
NUP88-205ENST00000572809 C17orf112F2Z3M2 114 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 H7BYZ3 331 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 NDUFB4O95168 129 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 NBEAP1P0C6P0 100 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 PET100P0DJ07 73 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 CT45A10P0DMU9 189 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 DEFB130BP0DP73 79 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 DEFB130AP0DP74 79 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 PYYP10082 97 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 RPL12P30050 165 aaKnown RBP5.26□□□□□ -1.57
NUP88-205ENST00000572809 FCN2Q15485 313 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 ZNF493Q6ZR52 646 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 POM121L12Q8N7R1 296 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 BLNKQ8WV28 456 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 MRPL53Q96EL3 112 aaKnown RBP5.26□□□□□ -1.57
NUP88-205ENST00000572809 LINC00477Q96M19 166 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 C20orf144Q9BQM9 153 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 PARD6GQ9BYG4 376 aaPredicted RBP5.26□□□□□ -1.57
NUP88-205ENST00000572809 OR51M1Q9H341 326 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 AAMDCQ9H7C9 122 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 C11orf21Q9P2W6 132 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 PRELID1Q9Y255 219 aa5.26□□□□□ -1.57
NUP88-205ENST00000572809 HYDINQ4G0P3 5121 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 PLAC8L1A1L4L8 177 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 CBY3A6NI87 242 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 M0R3E3 92 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 IFNA5P01569 189 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 LEPP41159 167 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 ERCC8Q13216 396 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 PDE6HQ13956 83 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 GFI1BQ5VTD9 330 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 MIR17HGQ75NE6 70 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 EXOC3-AS1Q8N2X6 119 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 SCGB1C1Q8TD33 95 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 C16orf74Q96GX8 76 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 FAM167A-AS1Q96KT0 104 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 ATP5SQ99766 215 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 SLC25A2Q9BXI2 301 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 MRPL32Q9BYC8 188 aaKnown RBP5.25□□□□□ -1.57
NUP88-205ENST00000572809 KCNIP2Q9NS61 270 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 FUT9Q9Y231 359 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 HSPB11Q9Y547 144 aa5.25□□□□□ -1.57
NUP88-205ENST00000572809 TIMM8BQ9Y5J9 83 aaPredicted RBP5.25□□□□□ -1.57
NUP88-205ENST00000572809 TRAV12-3A0A0B4J271 114 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 F5H768 121 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 SLC25A5P05141 298 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms