RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 C1orf64Q8NEQ6 169 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 Q96M85 177 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 RNF5Q99942 180 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 DPH3P1Q9H4G8 78 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 ASF1BQ9NVP2 202 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 ARAP2Q8WZ64 1704 aa3.3□□□□□ -1.88
TOPBP1-210ENST00000572787 LRP4O75096 1905 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 BRWD3Q6RI45 1802 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 TRAV14DV4A0A0A6YYC5 116 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 GNGT2O14610 69 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 CGAP01215 116 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 IGLV1-47P01700 117 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 IGHV3-53P01767 116 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 IGLV7-43P04211 117 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 FAM229BQ4G0N7 80 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 Q6ZR03 302 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 C5orf38Q86SI9 138 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 TMEM105Q8N8V8 129 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 C15orf53Q8NAA6 179 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 SLC50A1Q9BRV3 221 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 CST11Q9H112 138 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 FAM215AQ9Y5M1 114 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 CC2D2AQ9P2K1 1620 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 CITO14578 2027 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 NUP205Q92621 2012 aa3.29□□□□□ -1.88
TOPBP1-210ENST00000572787 KIF26AQ9ULI4 1882 aaPredicted RBP3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 POLEQ07864 2286 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 ABCC5O15440 1437 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 C10orf71Q711Q0 1435 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 ABCA3Q99758 1704 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 A0A096LNJ9 63 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 TRBV6-6A0A0A6YYG2 114 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 ZNF705FA8MVS1 300 aaPredicted RBP3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 H7C2G1 150 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 PDCD5O14737 125 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 SFT2D2O95562 160 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 NMBP08949 121 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 COL8A2P25067 703 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 DEFB116Q30KQ4 102 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 Q5W150 140 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 S100ZQ8WXG8 99 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 RABAC1Q9UI14 185 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 HHLA3Q9XRX5 114 aa3.28□□□□□ -1.88
TOPBP1-210ENST00000572787 CASKIN1Q8WXD9 1431 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 MYH13Q9UKX3 1938 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 LTBP4Q8N2S1 1624 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 IGLC7A0M8Q6 106 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 M0R233 179 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 UBL3O95164 117 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 SLC25A6P12236 298 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 POLR2JP52435 117 aaKnown RBP3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 DEFA5Q01523 94 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 TDRG1Q3Y452 100 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 Q5BKY6 102 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 FAM27BQ5VT28 67 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 Q8IYB0 196 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 Q8N814 137 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 Q8N8P6 123 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 SMIM7Q9BQ49 75 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 ZNF646O15015 1829 aaPredicted RBP3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 KIF20BQ96Q89 1820 aa3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 MARF1Q9Y4F3 1742 aaKnown RBP3.27□□□□□ -1.89
TOPBP1-210ENST00000572787 CROCCQ5TZA2 2017 aa3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 CASZ1Q86V15 1759 aa3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 IGLV1-51P01701 117 aa3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 CLPSP04118 112 aa3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 SSR2P43308 183 aa3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 ROMO1P60602 79 aa3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 LGALSLQ3ZCW2 172 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 SPANXN1Q5VSR9 72 aa3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 S100A16Q96FQ6 103 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 PMCHL2Q9BQD1 86 aa3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 C14orf132Q9NPU4 83 aa3.26□□□□□ -1.89
TOPBP1-210ENST00000572787 PXDNQ92626 1479 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 IGKV2D-26A0A0A0MRZ7 120 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 PANO1I0J062 215 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 PIRTP0C851 137 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 Q6ZQT0 140 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 CYB561D1Q8N8Q1 229 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 SVILO95425 2214 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 ZSWIM8A7E2V4 1837 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 PTPRBP23467 1997 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 ANAPC1Q9H1A4 1944 aa3.25□□□□□ -1.89
TOPBP1-210ENST00000572787 LRRIQ1Q96JM4 1722 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 ARHGEF12Q9NZN5 1544 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 TRBV7-7A0A0K0K1E9 115 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 ATOX1O00244 68 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 ZNF22P17026 224 aaPredicted RBP3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 INSL4Q14641 139 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 ADIRFQ15847 76 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 Q6ZS52 159 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 SLC25A26Q70HW3 274 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 LINC00301Q8NCQ3 95 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 TSLPQ969D9 159 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 LTBP1Q14766 1721 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 PLIN4Q96Q06 1357 aa3.24□□□□□ -1.89
TOPBP1-210ENST00000572787 CACNA1IQ9P0X4 2223 aa3.23□□□□□ -1.89
TOPBP1-210ENST00000572787 IGLV3-12A0A075B6K2 115 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms