RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 BPIFCQ8NFQ6 507 aa4.38□□□□□ -1.71
PRPF8-204ENST00000572445 OR10G8Q8NGN5 311 aa4.38□□□□□ -1.71
PRPF8-204ENST00000572445 LRRC20Q8TCA0 184 aa4.38□□□□□ -1.71
PRPF8-204ENST00000572445 SMIM4Q8WVI0 70 aa4.38□□□□□ -1.71
PRPF8-204ENST00000572445 PRRT1Q99946 306 aa4.38□□□□□ -1.71
PRPF8-204ENST00000572445 NOP10Q9NPE3 64 aaKnown RBP4.38□□□□□ -1.71
PRPF8-204ENST00000572445 IGKV1OR2-108A0A075B7D4 117 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 A0A0B4J2A0 478 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 LINC00854A0A1B0GVQ3 168 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 SMIM9A6NGZ8 99 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 ZNF98A6NK75 572 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 SNRPGP15A8MWD9 76 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 SSSCA1O60232 199 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 FABP1P07148 127 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 CCR6P51684 374 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 SSX7Q7RTT5 188 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 MCFD2Q8NI22 146 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 IGF2BP2-AS1Q96M15 143 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 KRTAP1-5Q9BYS1 174 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 SCRT2Q9NQ03 307 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 SHPKQ9UHJ6 478 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 SCP2D1Q9UJQ7 156 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 KCNIP3Q9Y2W7 256 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 LINC00588Q9Y4M8 146 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 TMEM56-RWDD3S4R434 201 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 U3KQ87 197 aa4.37□□□□□ -1.71
PRPF8-204ENST00000572445 TRAV8-2A0A0B4J237 113 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 IL5P05113 134 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 ATP5G1P05496 136 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 LINC00869P0C866 280 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 ATP5G3P48201 142 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 CCL18P55774 89 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 SLC38A11Q08AI6 406 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 SURF2Q15527 256 aaPredicted RBP4.36□□□□□ -1.71
PRPF8-204ENST00000572445 KIAA1644Q3SXP7 199 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 RNF212Q495C1 297 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 PYDC2Q56P42 97 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 RNASEKQ6P5S7 137 aaKnown RBP4.36□□□□□ -1.71
PRPF8-204ENST00000572445 AMTNQ6UX39 209 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 C15orf53Q8NAA6 179 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 ZNRF2Q8NHG8 242 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 TRGV9Q99603 122 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 ZNF586Q9NXT0 402 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 HIGD1AQ9Y241 93 aa4.36□□□□□ -1.71
PRPF8-204ENST00000572445 LRP1BQ9NZR2 4599 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 A0A096LPF7 62 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 ANKRD20A5PA0PJZ0 165 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 H3BRN7 92 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 CRXO43186 299 aaPredicted RBP4.35□□□□□ -1.71
PRPF8-204ENST00000572445 ADAP1O75689 374 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 IGHV3-53P01767 116 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 MEOX2P50222 304 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 UBE2MP61081 183 aaKnown RBP4.35□□□□□ -1.71
PRPF8-204ENST00000572445 POLR2GP62487 172 aaKnown RBP eCLIP4.35□□□□□ -1.71
PRPF8-204ENST00000572445 SRPXP78539 464 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 PPP1R1AQ13522 171 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 C6orf226Q5I0X4 101 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 SPANXN2Q5MJ10 180 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 C1orf194Q5T5A4 169 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 C9orf47Q6ZRZ4 202 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 CYP2G1PQ6ZSU1 146 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 C15orf40Q8WUR7 153 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 IL22RA2Q969J5 263 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 RPUSD4Q96CM3 377 aaKnown RBP4.35□□□□□ -1.71
PRPF8-204ENST00000572445 GNPNAT1Q96EK6 184 aaPredicted RBP4.35□□□□□ -1.71
PRPF8-204ENST00000572445 FAM210BQ96KR6 192 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 ARL6Q9H0F7 186 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 TMPRSS5Q9H3S3 457 aa4.35□□□□□ -1.71
PRPF8-204ENST00000572445 CSDC2Q9Y534 153 aaKnown RBP4.35□□□□□ -1.71
PRPF8-204ENST00000572445 FLG2Q5D862 2391 aaPredicted RBP4.35□□□□□ -1.71
PRPF8-204ENST00000572445 PLAC8L1A1L4L8 177 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 CCDC160A6NGH7 325 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 LYRM9A8MSI8 78 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 SLC17A3O00476 420 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 SYNGR2O43760 224 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 DUSP14O95147 198 aaKnown RBP4.34□□□□□ -1.71
PRPF8-204ENST00000572445 RLN2P04090 185 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 METTL15P1P0C7V9 234 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 GPX4P36969 197 aaPredicted RBP4.34□□□□□ -1.71
PRPF8-204ENST00000572445 MRPS10P82664 201 aaKnown RBP4.34□□□□□ -1.71
PRPF8-204ENST00000572445 SPATA31B1PQ5VZV4 182 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 TMEM144Q7Z5S9 345 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 OR8A1Q8NGG7 326 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 C16orf74Q96GX8 76 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 SCGB3A2Q96PL1 93 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 SOSTQ9BQB4 213 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 SHANK2-AS3Q9BTD1 123 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 MRPS26Q9BYN8 205 aaKnown RBP4.34□□□□□ -1.71
PRPF8-204ENST00000572445 PSENENQ9NZ42 101 aa4.34□□□□□ -1.71
PRPF8-204ENST00000572445 CCDC59Q9P031 241 aaKnown RBP4.34□□□□□ -1.71
PRPF8-204ENST00000572445 TRAV12-3A0A0B4J271 114 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 FABP12A6NFH5 140 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 PMS2P5A8MQ11 134 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 AGPAT2O15120 278 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 HYPMO75409 117 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 MED6O75586 246 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 RPL7P18124 248 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms