RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 CXorf1O96002 111 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 INSP01308 110 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 HBE1P02100 147 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 TSPOP30536 169 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 FGF8P55075 233 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 PMS2P11Q13670 270 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 C12orf74Q32Q52 190 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 AKR1C8PQ5T2L2 129 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 GFI1BQ5VTD9 330 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 Q6ZQT7 251 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 ZFAND2AQ8N6M9 145 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 RXFP4Q8TDU9 374 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 LINC01587Q99440 93 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 STAB2Q8WWQ8 2551 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 DNAH7Q8WXX0 4024 aa6.22□□□□□ -1.41
TRAPPC1-203ENST00000571739 TRAV12-3A0A0B4J271 114 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 CXorf65A6NEN9 183 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 SLC25A5P05141 298 aaKnown RBP6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 HTN1P15515 57 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 CRISP2P16562 243 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 LEPP41159 167 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 CSN1S1P47710 185 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 ZNF138P52744 262 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 EMP1P54849 157 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 SUMO1P63165 101 aaKnown RBP6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 GNG5P63218 68 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 RRN3P1Q2M238 152 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 PRR9Q5T870 116 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 ZNF767PQ75MW2 155 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 AKAP14Q86UN6 197 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 ARL6IP6Q8N6S5 226 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 PHLDA1Q8WV24 401 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 MBD3L1Q8WWY6 194 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 TVP23CQ96ET8 276 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 TMEM208Q9BTX3 173 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 TMEM167BQ9NRX6 74 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 DKK2Q9UBU2 259 aa6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 YTHDF2Q9Y5A9 579 aaKnown RBP6.21□□□□□ -1.42
TRAPPC1-203ENST00000571739 STARD9Q9P2P6 4700 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 LOC102723971A0A1B0GUV8 181 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 A0A1W2PRE2 83 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 TMEM189A5PLL7 270 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 GGTLC3B5MD39 225 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 H7BYZ3 331 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 PFDN1O60925 122 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 NMBP08949 121 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 RNASE4P34096 147 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 TAS2R60P59551 318 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 BTN1A1Q13410 526 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 TMEM78Q5T7P6 136 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 Q6ZTC4 211 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 TMEM256Q8N2U0 113 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 C9orf62Q8N4C0 152 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 Q8TAT8 98 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 STOML3Q8TAV4 291 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 CMTM2Q8TAZ6 248 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 TMED6Q8WW62 240 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 SGK494Q96LW2 274 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 C20orf144Q9BQM9 153 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 EPDR1Q9UM22 224 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 RPH3ALQ9UNE2 315 aa6.2□□□□□ -1.42
TRAPPC1-203ENST00000571739 TRAV8-1A0A0A6YYK1 113 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 TRBV7-9A0A0J9YWB2 115 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 C7orf71A4D174 169 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 MAP1LC3B2A6NCE7 125 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 UMAD1C9J7I0 102 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 IGLV2-11P01706 119 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 TCRAP04437 139 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 GPX1P07203 203 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 SPART-AS1P0CW21 52 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 TPT1P13693 172 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 EIF5AP63241 154 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 FAM74A1Q5RGS3 127 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 FAM222AQ5U5X8 452 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 GOLT1AQ6ZVE7 132 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 RNASE8Q8TDE3 154 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 MAP1LC3BQ9GZQ8 125 aa6.19□□□□□ -1.42
TRAPPC1-203ENST00000571739 NUPR2A6NF83 97 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 FAM74A7A6NL05 159 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 UBE2G2P60604 165 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 CCL20P78556 96 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 CCDC28AQ8IWP9 274 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 IQCF2Q8IXL9 164 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 C5orf17Q8NAS9 161 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 SFT2D1Q8WV19 159 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 LINC00479Q96M42 142 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 PYGO2Q9BRQ0 406 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 LENEPQ9Y5L5 61 aa6.18□□□□□ -1.42
TRAPPC1-203ENST00000571739 NKX2-5P52952 324 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 DPPA3Q6W0C5 159 aa6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 ZNF493Q6ZR52 646 aa6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 SLC51BQ86UW2 128 aa6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 C11orf72Q8NBR9 251 aa6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 FAM213BQ8TBF2 198 aa6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 TMEM263Q8WUH6 116 aaKnown RBP6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 C16orf74Q96GX8 76 aa6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 LINC00467Q9BRT7 94 aa6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 NIPSNAP3BQ9BS92 247 aa6.17□□□□□ -1.42
TRAPPC1-203ENST00000571739 NOP10Q9NPE3 64 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms