RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 GTSCR1Q86UQ5 136 aa10.14□□□□□ -0.79
RPAIN-209ENST00000571558 RPUSD4Q96CM3 377 aaKnown RBP10.14□□□□□ -0.79
RPAIN-209ENST00000571558 LINC00052Q96N35 136 aa10.14□□□□□ -0.79
RPAIN-209ENST00000571558 MAP6D1Q9H9H5 199 aa10.14□□□□□ -0.79
RPAIN-209ENST00000571558 ALMS1Q8TCU4 4167 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 SCO2A0A1W2PP80 73 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 DIRC3C9JPN6 131 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 PEX7O00628 323 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 SRP19P09132 144 aaKnown RBP10.13□□□□□ -0.79
RPAIN-209ENST00000571558 PRB4P10163 310 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-209ENST00000571558 DEFB1P60022 68 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 PEA15Q15121 130 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 PSMG4Q5JS54 123 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 UQCC3Q6UW78 93 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 CMTM2Q8TAZ6 248 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 C2CD4CQ8TF44 421 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 HIST1H2BAQ96A08 127 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 FAM110AQ9BQ89 295 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 ATG101Q9BSB4 218 aa10.13□□□□□ -0.79
RPAIN-209ENST00000571558 F6UZH7 168 aa10.12□□□□□ -0.79
RPAIN-209ENST00000571558 TMEM250H0YL14 139 aa10.12□□□□□ -0.79
RPAIN-209ENST00000571558 ATP6V1G1O75348 118 aa10.12□□□□□ -0.79
RPAIN-209ENST00000571558 CD7P09564 240 aa10.12□□□□□ -0.79
RPAIN-209ENST00000571558 ZNF738Q8NE65 137 aa10.12□□□□□ -0.79
RPAIN-209ENST00000571558 KLF12Q9Y4X4 402 aa10.12□□□□□ -0.79
RPAIN-209ENST00000571558 FRAS1Q86XX4 4008 aa10.12□□□□□ -0.79
RPAIN-209ENST00000571558 IGKV2-40A0A087WW87 121 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-209ENST00000571558 RBAKDNA6NC62 111 aa10.11□□□□□ -0.79
RPAIN-209ENST00000571558 F6UB75 175 aa10.11□□□□□ -0.79
RPAIN-209ENST00000571558 IGKV2D-40P01614 121 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-209ENST00000571558 CSN1S1P47710 185 aa10.11□□□□□ -0.79
RPAIN-209ENST00000571558 DEFB131AP59861 70 aa10.11□□□□□ -0.79
RPAIN-209ENST00000571558 LINC00322Q6ZN03 302 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-209ENST00000571558 GOLT1AQ6ZVE7 132 aa10.11□□□□□ -0.79
RPAIN-209ENST00000571558 SLC7A5P1Q8MH63 180 aa10.11□□□□□ -0.79
RPAIN-209ENST00000571558 CYB561D1Q8N8Q1 229 aa10.11□□□□□ -0.79
RPAIN-209ENST00000571558 LINC00479Q96M42 142 aa10.11□□□□□ -0.79
RPAIN-209ENST00000571558 SLC35B3Q9H1N7 401 aa10.11□□□□□ -0.79
RPAIN-209ENST00000571558 A0A0J9YX75 114 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 SERTM2A0A1B0GWG4 89 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 IGLV2-11P01706 119 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 S100A1P23297 94 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 ZNF124Q15973 351 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 GDF5OSQ5U4N7 250 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 OR8A1Q8NGG7 326 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 DERL1Q9BUN8 251 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 SAV1Q9H4B6 383 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-209ENST00000571558 TREM1Q9NP99 234 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
RPAIN-209ENST00000571558 NPIPB6E9PJ23 425 aa10.09□□□□□ -0.79
RPAIN-209ENST00000571558 CMC4P56277 68 aaPredicted RBP10.09□□□□□ -0.79
RPAIN-209ENST00000571558 FOXI2Q6ZQN5 318 aa10.09□□□□□ -0.79
RPAIN-209ENST00000571558 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
RPAIN-209ENST00000571558 APRG1Q8IVJ8 170 aa10.09□□□□□ -0.79
RPAIN-209ENST00000571558 TMEM75Q8N9X5 138 aa10.09□□□□□ -0.79
RPAIN-209ENST00000571558 VGLL1Q99990 258 aa10.09□□□□□ -0.79
RPAIN-209ENST00000571558 TRAV8-1A0A0A6YYK1 113 aa10.08□□□□□ -0.8
RPAIN-209ENST00000571558 TRAV34A0A0B4J273 112 aa10.08□□□□□ -0.8
RPAIN-209ENST00000571558 TRBV6-1A0A0K0K1D8 114 aa10.08□□□□□ -0.8
RPAIN-209ENST00000571558 A8MTW9 85 aa10.08□□□□□ -0.8
RPAIN-209ENST00000571558 OR11H12B2RN74 326 aa10.08□□□□□ -0.8
RPAIN-209ENST00000571558 LY6G6CO95867 125 aa10.08□□□□□ -0.8
RPAIN-209ENST00000571558 ZNF705DP0CH99 300 aaPredicted RBP10.08□□□□□ -0.8
RPAIN-209ENST00000571558 ZNF705BP0CI00 300 aaPredicted RBP10.08□□□□□ -0.8
RPAIN-209ENST00000571558 RPL35P42766 123 aaKnown RBP10.08□□□□□ -0.8
RPAIN-209ENST00000571558 ERCC8Q13216 396 aa10.08□□□□□ -0.8
RPAIN-209ENST00000571558 AGPAT4-IT1Q9H0P7 198 aa10.08□□□□□ -0.8
RPAIN-209ENST00000571558 PARLQ9H300 379 aa10.08□□□□□ -0.8
RPAIN-209ENST00000571558 TRBV20OR9-2A0A075B6H5 130 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 KNCNA6PVL3 124 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 SFTA3P0C7M3 94 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 TMEM183BQ1AE95 376 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 OR10J6PQ8NGY7 276 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 FMC1Q96HJ9 113 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 WFDC10AQ9H1F0 79 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 TMEM218A2RU14 115 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 H3BMM0 161 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 K7EQM0 130 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 S100A9P06702 114 aaKnown RBP10.07□□□□□ -0.8
RPAIN-209ENST00000571558 AKR1C3P42330 323 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 CNN1P51911 297 aaKnown RBP10.07□□□□□ -0.8
RPAIN-209ENST00000571558 EBLN2Q6P2I7 272 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 TVP23CQ96ET8 276 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 FAM19A4Q96LR4 140 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 SGK494Q96LW2 274 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 IGF2BP2-AS1Q96M15 143 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 LINC00477Q96M19 166 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 PPP1R14DQ9NXH3 145 aa10.07□□□□□ -0.8
RPAIN-209ENST00000571558 FBLL1A6NHQ2 334 aaKnown RBP10.06□□□□□ -0.8
RPAIN-209ENST00000571558 LTAP01374 205 aa10.06□□□□□ -0.8
RPAIN-209ENST00000571558 CT45A10P0DMU9 189 aa10.06□□□□□ -0.8
RPAIN-209ENST00000571558 TAS2R60P59551 318 aa10.06□□□□□ -0.8
RPAIN-209ENST00000571558 FLI1Q01543 452 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-209ENST00000571558 HIST1H1AQ02539 215 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-209ENST00000571558 ACTL10Q5JWF8 245 aa10.06□□□□□ -0.8
RPAIN-209ENST00000571558 AMTNQ6UX39 209 aa10.06□□□□□ -0.8
RPAIN-209ENST00000571558 Q86TA4 180 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms