RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 DIRC3C9JPN6 131 aa15.2■□□□□ 0.02
SPNS2-203ENST00000570979 ZNF738Q8NE65 137 aa15.2■□□□□ 0.02
SPNS2-203ENST00000570979 MRPS16Q9Y3D3 137 aaKnown RBP15.2■□□□□ 0.02
SPNS2-203ENST00000570979 TRAV41A0A0B4J266 112 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 TRAV40A0A0B4J280 105 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 HIGD1CA8MV81 97 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 NPIPB6E9PJ23 425 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 CCL25O15444 150 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 CT45A10P0DMU9 189 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 MRPL54Q6P161 138 aaKnown RBP15.19■□□□□ 0.02
SPNS2-203ENST00000570979 PRNTQ86SH4 94 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 KLHDC1Q8N7A1 406 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 PSG8Q9UQ74 426 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 H3BTX0 84 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 CLEC3BP05452 202 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 KRTAP24-1Q3LI83 254 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 Q6AWC8 147 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 RBPMS2Q6ZRY4 209 aaKnown RBP15.19■□□□□ 0.02
SPNS2-203ENST00000570979 TMEM256Q8N2U0 113 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 ALKBH7Q9BT30 221 aaPredicted RBP15.19■□□□□ 0.02
SPNS2-203ENST00000570979 HIF1ANQ9NWT6 349 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 CLEC5AQ9NY25 188 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 COX11Q9Y6N1 276 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 S4R3C0 116 aa15.19■□□□□ 0.02
SPNS2-203ENST00000570979 STAB1Q9NY15 2570 aa15.18■□□□□ 0.02
SPNS2-203ENST00000570979 A0A1B0GW15 77 aa15.18■□□□□ 0.02
SPNS2-203ENST00000570979 J3QLI3 93 aa15.18■□□□□ 0.02
SPNS2-203ENST00000570979 IGLV2-11P01706 119 aa15.18■□□□□ 0.02
SPNS2-203ENST00000570979 LAMTOR2Q9Y2Q5 125 aa15.18■□□□□ 0.02
SPNS2-203ENST00000570979 A0A087X0K7 114 aa15.17■□□□□ 0.02
SPNS2-203ENST00000570979 IGF1P05019 195 aa15.17■□□□□ 0.02
SPNS2-203ENST00000570979 GPR183P32249 361 aa15.17■□□□□ 0.02
SPNS2-203ENST00000570979 TMEM158Q8WZ71 300 aa15.17■□□□□ 0.02
SPNS2-203ENST00000570979 PAM16Q9Y3D7 125 aa15.17■□□□□ 0.02
SPNS2-203ENST00000570979 FOXA3P55318 350 aaPredicted RBP15.16■□□□□ 0.02
SPNS2-203ENST00000570979 HBBP68871 147 aa15.16■□□□□ 0.02
SPNS2-203ENST00000570979 USMG5Q96IX5 58 aa15.16■□□□□ 0.02
SPNS2-203ENST00000570979 SLC50A1Q9BRV3 221 aa15.16■□□□□ 0.02
SPNS2-203ENST00000570979 SPINK4O60575 86 aa15.16■□□□□ 0.02
SPNS2-203ENST00000570979 METTL26Q96S19 204 aa15.16■□□□□ 0.02
SPNS2-203ENST00000570979 CIDEAO60543 219 aa15.15■□□□□ 0.02
SPNS2-203ENST00000570979 CA1P00915 261 aaPredicted RBP15.15■□□□□ 0.02
SPNS2-203ENST00000570979 IGHV3-23P01764 117 aa15.15■□□□□ 0.02
SPNS2-203ENST00000570979 BATFQ16520 125 aa15.15■□□□□ 0.02
SPNS2-203ENST00000570979 COX8CQ7Z4L0 72 aa15.15■□□□□ 0.02
SPNS2-203ENST00000570979 PIFOQ8TCI5 191 aa15.15■□□□□ 0.02
SPNS2-203ENST00000570979 SGK494Q96LW2 274 aa15.15■□□□□ 0.02
SPNS2-203ENST00000570979 HSBP1L1C9JCN9 74 aa15.14■□□□□ 0.01
SPNS2-203ENST00000570979 IGLC3P0DOY3 106 aa15.14■□□□□ 0.01
SPNS2-203ENST00000570979 SLC35B1P78383 322 aa15.14■□□□□ 0.01
SPNS2-203ENST00000570979 C19orf54Q5BKX5 351 aa15.14■□□□□ 0.01
SPNS2-203ENST00000570979 C16orf54Q6UWD8 224 aa15.14■□□□□ 0.01
SPNS2-203ENST00000570979 C17orf77Q96MU5 243 aa15.14■□□□□ 0.01
SPNS2-203ENST00000570979 GNB4Q9HAV0 340 aa15.14■□□□□ 0.01
SPNS2-203ENST00000570979 ZNF580Q9UK33 172 aa15.14■□□□□ 0.01
SPNS2-203ENST00000570979 A0A1B0GXF2 115 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 A6NDX4 124 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 ZNF785A8K8V0 405 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 AVPP01185 164 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 IGHG2P01859 326 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 HNRNPA3P51991 378 aaKnown RBP15.13■□□□□ 0.01
SPNS2-203ENST00000570979 STPG4Q8N801 248 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 BORCS7Q96B45 105 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 NDFIP1Q9BT67 221 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 SAMD10Q9BYL1 202 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 ZFAND3Q9H8U3 227 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 GRIFINA4D1Z8 144 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 G3V318 75 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 BUB3O43684 328 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 CLEC19AQ6UXS0 136 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 BRD3OSQ6XYD6 125 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 SIGLECL1Q8N7X8 197 aa15.13■□□□□ 0.01
SPNS2-203ENST00000570979 RBAKDNA6NC62 111 aa15.12■□□□□ 0.01
SPNS2-203ENST00000570979 NUPR1O60356 82 aa15.12■□□□□ 0.01
SPNS2-203ENST00000570979 BMI1P35226 326 aa15.12■□□□□ 0.01
SPNS2-203ENST00000570979 TFPI2P48307 235 aa15.12■□□□□ 0.01
SPNS2-203ENST00000570979 LINC00310P59036 64 aa15.12■□□□□ 0.01
SPNS2-203ENST00000570979 RIGQ13278 110 aa15.12■□□□□ 0.01
SPNS2-203ENST00000570979 TP53TG3Q9ULZ0 132 aa15.12■□□□□ 0.01
SPNS2-203ENST00000570979 TRAV8-1A0A0A6YYK1 113 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 SERF1AO75920 110 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 SRIP30626 198 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 KLF5Q13887 457 aaPredicted RBP15.11■□□□□ 0.01
SPNS2-203ENST00000570979 TMEM219Q86XT9 240 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 Q8N976 141 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 MRPL53Q96EL3 112 aaKnown RBP15.11■□□□□ 0.01
SPNS2-203ENST00000570979 A0A0G2JLM5 398 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 HAX1O00165 279 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 TRGV3P03979 118 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 IGHV4-38-2P0DP08 117 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 SPATA45Q537H7 98 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 CCDC140Q96MF4 163 aa15.11■□□□□ 0.01
SPNS2-203ENST00000570979 IGHV3OR16-10A0A075B7F0 116 aa15.1■□□□□ 0.01
SPNS2-203ENST00000570979 H3BUX3 64 aa15.1■□□□□ 0.01
SPNS2-203ENST00000570979 TDRG1Q3Y452 100 aa15.1■□□□□ 0.01
SPNS2-203ENST00000570979 LINC00322Q6ZN03 302 aaPredicted RBP15.1■□□□□ 0.01
SPNS2-203ENST00000570979 CHEK1O14757 476 aa15.09■□□□□ 0.01
SPNS2-203ENST00000570979 PET117Q6UWS5 81 aa15.09■□□□□ 0.01
SPNS2-203ENST00000570979 ZC2HC1AQ96GY0 325 aa15.09■□□□□ 0.01
SPNS2-203ENST00000570979 KCNS1Q96KK3 526 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms