RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TIMM8BQ9Y5J9 83 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 IGLV2-18A0A075B6J9 118 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 TRBV19A0A075B6N1 114 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 E5RGE8 158 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 LEPP41159 167 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 FCN2Q15485 313 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 LGALS9BQ3B8N2 356 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 CCDC28AQ8IWP9 274 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 MRPL53Q96EL3 112 aaKnown RBP8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 ODF3Q96PU9 254 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 NOP10Q9NPE3 64 aaKnown RBP8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 KCNIP2Q9NS61 270 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 TMEM14CQ9P0S9 112 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 TIMM9Q9Y5J7 89 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 DNAH2Q9P225 4427 aa8.72□□□□□ -1.01
CTDNEP1-205ENST00000570828 CBY3A6NI87 242 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 KRTAP9-7A8MTY7 169 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 NPIPB6E9PJ23 425 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 INMT-MINDY4F8WBC2 141 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 CT45A10P0DMU9 189 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 HIST1H1EP10412 219 aaKnown RBP8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 CYCSP99999 105 aaKnown RBP8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 NHLH2Q02577 135 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 PDE6HQ13956 83 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 CLINT1Q14677 625 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 KIR3DS1Q14943 382 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 FAM210AQ96ND0 272 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 ATG101Q9BSB4 218 aa8.71□□□□□ -1.02
CTDNEP1-205ENST00000570828 FAT2Q9NYQ8 4349 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 M0R3E3 92 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 PYYP10082 97 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 DEFA1P59665 94 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 DEFA3P59666 94 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 IFITM3Q01628 133 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 KRTAP19-4Q3LI73 84 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 GCSAMLQ5JQS6 135 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 BLNKQ8WV28 456 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 AAMDCQ9H7C9 122 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 OR5AC2Q9NZP5 309 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 PRELID1Q9Y255 219 aa8.7□□□□□ -1.02
CTDNEP1-205ENST00000570828 TRAV12-3A0A0B4J271 114 aa8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 PRSS29PA6NIE9 313 aa8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 SNURFLB1AK76 121 aa8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 SSNA1O43805 119 aa8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 NDUFB4O95168 129 aa8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 NUDT3O95989 172 aa8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 PET100P0DJ07 73 aa8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 FAM3BP58499 235 aaPredicted RBP8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 SOHLH1Q5JUK2 328 aa8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 PPP1R1CQ8WVI7 109 aa8.69□□□□□ -1.02
CTDNEP1-205ENST00000570828 HERC2O95714 4834 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 C17orf112F2Z3M2 114 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 H0YIZ8 118 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 RTL8CO15255 209 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 SLC25A5P05141 298 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 H2BFSP57053 126 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 MIR17HGQ75NE6 70 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 EXOC3-AS1Q8N2X6 119 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 PYGO2Q9BRQ0 406 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 MARVELD1Q9BSK0 173 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 SLC25A2Q9BXI2 301 aa8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 MRPL32Q9BYC8 188 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 WDR61Q9GZS3 305 aaKnown RBP8.68□□□□□ -1.02
CTDNEP1-205ENST00000570828 PKHD1P08F94 4074 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 C7orf71A4D174 169 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 CCL18P55774 89 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 ERCC8Q13216 396 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 ICAM4Q14773 271 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 LCE5AQ5TCM9 118 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 FAM122CQ6P4D5 195 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 Q6ZR54 194 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 RNF141Q8WVD5 230 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 FAM167A-AS1Q96KT0 104 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 LINC00477Q96M19 166 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 ATP5SQ99766 215 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 CDIP1Q9H305 208 aa8.67□□□□□ -1.02
CTDNEP1-205ENST00000570828 IGKV2-40A0A087WW87 121 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 GAGE12BA1L429 117 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 OR7C2O60412 319 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 GAGE7O76087 117 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 TNFRSF6BO95407 300 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 SCGB1D1O95968 90 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 IGKV2D-40P01614 121 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 OR10J4P0C629 311 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 NBEAP1P0C6P0 100 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 GAGE12FP0CL80 117 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 GAGE12GP0CL81 117 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 GAGE12IP0CL82 117 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 OR5I1Q13606 314 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 TMEM78Q5T7P6 136 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 LINC00612Q8N6U2 182 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 ZNF680Q8NEM1 530 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 PAXXQ9BUH6 204 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 OR51M1Q9H341 326 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 FUT9Q9Y231 359 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 DNAH17Q9UFH2 4485 aa8.66□□□□□ -1.02
CTDNEP1-205ENST00000570828 TRAV26-1A0A087WT03 109 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 A0A1B0GVY2 172 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 KLLNB2CW77 178 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms