RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	PYGO2	Q9BRQ0	406 aa		12.96	□□□□□ -0.33
PKD1-238	ENST00000570150	AGRN	O00468	2067 aa		12.96	□□□□□ -0.33
PKD1-238	ENST00000570150		G3V3Q6	166 aa		12.95	□□□□□ -0.34
PKD1-238	ENST00000570150		M0R3E3	92 aa		12.95	□□□□□ -0.34
PKD1-238	ENST00000570150	CRISP2	P16562	243 aa		12.95	□□□□□ -0.34
PKD1-238	ENST00000570150	ZNF138	P52744	262 aa		12.95	□□□□□ -0.34
PKD1-238	ENST00000570150	NANOS2	P60321	138 aa	Known RBP	12.95	□□□□□ -0.34
PKD1-238	ENST00000570150	BAP18	Q8IXM2	172 aa		12.95	□□□□□ -0.34
PKD1-238	ENST00000570150	PHYHIPL	Q96FC7	376 aa		12.95	□□□□□ -0.34
PKD1-238	ENST00000570150	FAM210B	Q96KR6	192 aa		12.95	□□□□□ -0.34
PKD1-238	ENST00000570150	TRAV12-2	A0A075B6T6	113 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	CTXND1	A0A1B0GTU2	59 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	PRAC2	D3DTV9	90 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	PFDN1	O60925	122 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	GPX1	P07203	203 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	ARL14EPL	P0DKL9	152 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	CT45A10	P0DMU9	189 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	TCTE3	Q8IZS6	198 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	TMEM263	Q8WUH6	116 aa	Known RBP	12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	ZNF503	Q96F45	646 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	ST6GAL2	Q96JF0	529 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	STARD9	Q9P2P6	4700 aa		12.94	□□□□□ -0.34
PKD1-238	ENST00000570150	LCE6A	A0A183	80 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	SEC11B	P0C7V7	166 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	DPPA3	Q6W0C5	159 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	ZNF680	Q8NEM1	530 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	SUN5	Q8TC36	379 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	AGPAT4-IT1	Q9H0P7	198 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	ZNF492	Q9P255	531 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	DKK2	Q9UBU2	259 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	CSMD3	Q7Z407	3707 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	SACS	Q9NZJ4	4579 aa		12.93	□□□□□ -0.34
PKD1-238	ENST00000570150	C7orf71	A4D174	169 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	PGP	A6NDG6	321 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	KLLN	B2CW77	178 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	DIRC3	C9JPN6	131 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	BCL2L11	O43521	198 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	GCHFR	P30047	84 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	EMP1	P54849	157 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	GFI1B	Q5VTD9	330 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150		Q6ZNX1	250 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	C5orf17	Q8NAS9	161 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	LINC00467	Q9BRT7	94 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	SH3BGRL3	Q9H299	93 aa		12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.92	□□□□□ -0.34
PKD1-238	ENST00000570150	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	12.92	□□□□□ -0.34
PKD1-238	ENST00000570150		A0A1W2PRE2	83 aa		12.91	□□□□□ -0.34
PKD1-238	ENST00000570150	FAM19A4	Q96LR4	140 aa		12.91	□□□□□ -0.34
PKD1-238	ENST00000570150	TCEAL7	Q9BRU2	100 aa		12.91	□□□□□ -0.34
PKD1-238	ENST00000570150	NDFIP1	Q9BT67	221 aa		12.91	□□□□□ -0.34
PKD1-238	ENST00000570150	TPT1	P13693	172 aa	Known RBP	12.9	□□□□□ -0.34
PKD1-238	ENST00000570150	DAD1	P61803	113 aa		12.9	□□□□□ -0.34
PKD1-238	ENST00000570150	FAM222A	Q5U5X8	452 aa		12.9	□□□□□ -0.34
PKD1-238	ENST00000570150	HYLS1	Q96M11	299 aa		12.9	□□□□□ -0.34
PKD1-238	ENST00000570150	ZNF471	Q9BX82	626 aa	Predicted RBP	12.9	□□□□□ -0.34
PKD1-238	ENST00000570150	RYR2	Q92736	4967 aa		12.9	□□□□□ -0.34
PKD1-238	ENST00000570150	TENM2	Q9NT68	2774 aa		12.89	□□□□□ -0.35
PKD1-238	ENST00000570150	DEFB131B	A0A096LNP1	70 aa		12.89	□□□□□ -0.35
PKD1-238	ENST00000570150	SNURFL	B1AK76	121 aa		12.89	□□□□□ -0.35
PKD1-238	ENST00000570150	C12orf74	Q32Q52	190 aa		12.89	□□□□□ -0.35
PKD1-238	ENST00000570150	LGALSL	Q3ZCW2	172 aa	Predicted RBP	12.89	□□□□□ -0.35
PKD1-238	ENST00000570150	CYTL1	Q9NRR1	136 aa		12.89	□□□□□ -0.35
PKD1-238	ENST00000570150	ARL2-SNX15	V9GYD0	113 aa		12.89	□□□□□ -0.35
PKD1-238	ENST00000570150	LYST	Q99698	3801 aa		12.89	□□□□□ -0.35
PKD1-238	ENST00000570150	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	TRAV12-3	A0A0B4J271	114 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	SMLR1	H3BR10	107 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	TEX46	H3BTG2	121 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	IGKV2D-40	P01614	121 aa	Predicted RBP	12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	HTN1	P15515	57 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	PPT1	P50897	306 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	RAB5C	P51148	216 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	ERCC8	Q13216	396 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150		Q6ZTC4	211 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	AKAP14	Q86UN6	197 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150	IQCF2	Q8IXL9	164 aa		12.88	□□□□□ -0.35
PKD1-238	ENST00000570150		F6UZH7	168 aa		12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	RGS13	O14921	159 aa		12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	HMGB3	O15347	200 aa	Known RBP	12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	C1QB	P02746	253 aa		12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	RNASE4	P34096	147 aa	Known RBP	12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	ANXA2R	Q3ZCQ2	193 aa		12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	TMUB2	Q71RG4	321 aa		12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	EIF4E3	Q8N5X7	224 aa	Known RBP	12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	RNASE8	Q8TDE3	154 aa	Known RBP	12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	VGLL1	Q99990	258 aa		12.87	□□□□□ -0.35
PKD1-238	ENST00000570150	MAP1LC3B2	A6NCE7	125 aa		12.86	□□□□□ -0.35
PKD1-238	ENST00000570150	ZFP69	Q49AA0	526 aa		12.86	□□□□□ -0.35
PKD1-238	ENST00000570150	OR11H4	Q8NGC9	324 aa		12.86	□□□□□ -0.35
PKD1-238	ENST00000570150	NDUFAF3	Q9BU61	184 aa		12.86	□□□□□ -0.35
PKD1-238	ENST00000570150	MAP1LC3B	Q9GZQ8	125 aa		12.86	□□□□□ -0.35
PKD1-238	ENST00000570150	CELA1	Q9UNI1	258 aa		12.86	□□□□□ -0.35
PKD1-238	ENST00000570150	CBY3	A6NI87	242 aa		12.85	□□□□□ -0.35
PKD1-238	ENST00000570150	IGLL5	B9A064	214 aa		12.85	□□□□□ -0.35
PKD1-238	ENST00000570150	FHIT	P49789	147 aa		12.85	□□□□□ -0.35
PKD1-238	ENST00000570150	DAZ2	Q13117	558 aa	Known RBP	12.85	□□□□□ -0.35
PKD1-238	ENST00000570150	SAPCD1	Q5SSQ6	148 aa		12.85	□□□□□ -0.35
PKD1-238	ENST00000570150	IBA57	Q5T440	356 aa	Known RBP	12.85	□□□□□ -0.35
PKD1-238	ENST00000570150	LGALS9C	Q6DKI2	356 aa		12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms