RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 ACTL10Q5JWF8 245 aa17.03■□□□□ 0.32
VCPKMT-205ENST00000569518 KLHL30-AS1Q8NEE0 82 aa17.03■□□□□ 0.32
VCPKMT-205ENST00000569518 OR11H1Q8NG94 326 aa17.03■□□□□ 0.32
VCPKMT-205ENST00000569518 OR4B1Q8NGF8 309 aa17.03■□□□□ 0.32
VCPKMT-205ENST00000569518 FRZBQ92765 325 aa17.03■□□□□ 0.32
VCPKMT-205ENST00000569518 CBLN1P23435 193 aa17.03■□□□□ 0.32
VCPKMT-205ENST00000569518 OR1N2Q8NGR9 330 aa17.03■□□□□ 0.32
VCPKMT-205ENST00000569518 AGPAT4-IT1Q9H0P7 198 aa17.03■□□□□ 0.32
VCPKMT-205ENST00000569518 SELENOKQ9Y6D0 94 aa17.03■□□□□ 0.32
VCPKMT-205ENST00000569518 IZUMO1RA6ND01 250 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST1H2BKO60814 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST1H2BJP06899 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST1H2BOP23527 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST1H2BBP33778 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST1H2BDP58876 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST1H2BCP62807 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST2H2BEQ16778 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 C9orf47Q6ZRZ4 202 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 DCANP1Q8TF63 244 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST1H2BHQ93079 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 NEU1Q99519 415 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST1H2BNQ99877 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST1H2BMQ99879 126 aa17.02■□□□□ 0.31
VCPKMT-205ENST00000569518 A8MWL6 223 aa17.01■□□□□ 0.31
VCPKMT-205ENST00000569518 CT45A10P0DMU9 189 aa17.01■□□□□ 0.31
VCPKMT-205ENST00000569518 CD28P10747 220 aa17.01■□□□□ 0.31
VCPKMT-205ENST00000569518 HIST2H2BDQ6DRA6 164 aa17.01■□□□□ 0.31
VCPKMT-205ENST00000569518 NAT8BQ9UHF3 227 aa17.01■□□□□ 0.31
VCPKMT-205ENST00000569518 FRMD6-AS1P0C7T7 363 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 SAMD13Q5VXD3 122 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 ADAMTSL5Q6ZMM2 481 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 ZNF738Q8NE65 137 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 NUP35Q8NFH5 326 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 PPP1R14DQ9NXH3 145 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 FLNBO75369 2602 aaKnown RBP17■□□□□ 0.31
VCPKMT-205ENST00000569518 IGKV3-7A0A075B6H7 116 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 GTSF1Q8WW33 167 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 DPF1Q92782 380 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 DUX3Q96PT4 197 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 NDFIP1Q9BT67 221 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 GFRA4Q9GZZ7 299 aa17■□□□□ 0.31
VCPKMT-205ENST00000569518 HIGD1CA8MV81 97 aa16.99■□□□□ 0.31
VCPKMT-205ENST00000569518 TRGC1P0CF51 173 aa16.99■□□□□ 0.31
VCPKMT-205ENST00000569518 FAM162BQ5T6X4 162 aa16.99■□□□□ 0.31
VCPKMT-205ENST00000569518 OR2D3Q8NGH3 330 aa16.99■□□□□ 0.31
VCPKMT-205ENST00000569518 FAM231BA6NCW3 169 aa16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 ZNF138P52744 262 aa16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 FN1P02751 2386 aaKnown RBP16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 C5orf52A6NGY3 159 aa16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 OVOL1O14753 267 aa16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 SPINK4O60575 86 aa16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 SH2D1AO60880 128 aa16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 ZNF80P51504 273 aaPredicted RBP16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 TMEM78Q5T7P6 136 aa16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 MS4A6AQ9H2W1 248 aa16.98■□□□□ 0.31
VCPKMT-205ENST00000569518 RPL19P84098 196 aaKnown RBP16.97■□□□□ 0.31
VCPKMT-205ENST00000569518 FABP9Q0Z7S8 132 aa16.97■□□□□ 0.31
VCPKMT-205ENST00000569518 FHL3Q13643 280 aa16.97■□□□□ 0.31
VCPKMT-205ENST00000569518 SMUG1Q53HV7 270 aa16.97■□□□□ 0.31
VCPKMT-205ENST00000569518 C11orf44Q8N8P7 122 aa16.97■□□□□ 0.31
VCPKMT-205ENST00000569518 RAX2Q96IS3 184 aa16.97■□□□□ 0.31
VCPKMT-205ENST00000569518 TRAPPC1Q9Y5R8 145 aa16.97■□□□□ 0.31
VCPKMT-205ENST00000569518 SETXQ7Z333 2677 aaKnown RBP16.97■□□□□ 0.31
VCPKMT-205ENST00000569518 SETD2Q9BYW2 2564 aaPredicted RBP16.96■□□□□ 0.31
VCPKMT-205ENST00000569518 S100A6P06703 90 aa16.96■□□□□ 0.31
VCPKMT-205ENST00000569518 SNRPEP62304 92 aaKnown RBP16.96■□□□□ 0.31
VCPKMT-205ENST00000569518 OR9G4Q8NGQ1 327 aa16.96■□□□□ 0.31
VCPKMT-205ENST00000569518 DLX4Q92988 240 aaPredicted RBP16.96■□□□□ 0.31
VCPKMT-205ENST00000569518 CITED2Q99967 270 aaPredicted RBP16.96■□□□□ 0.31
VCPKMT-205ENST00000569518 PROK1P58294 105 aa16.96■□□□□ 0.3
VCPKMT-205ENST00000569518 MRPL54Q6P161 138 aaKnown RBP16.96■□□□□ 0.3
VCPKMT-205ENST00000569518 GNB1LQ9BYB4 327 aa16.96■□□□□ 0.3
VCPKMT-205ENST00000569518 M0QZ24 198 aa16.95■□□□□ 0.3
VCPKMT-205ENST00000569518 ZNF705DP0CH99 300 aaPredicted RBP16.95■□□□□ 0.3
VCPKMT-205ENST00000569518 ZNF705BP0CI00 300 aaPredicted RBP16.95■□□□□ 0.3
VCPKMT-205ENST00000569518 ID1P41134 155 aa16.95■□□□□ 0.3
VCPKMT-205ENST00000569518 PEMTQ9UBM1 199 aa16.95■□□□□ 0.3
VCPKMT-205ENST00000569518 RNF114Q9Y508 228 aa16.95■□□□□ 0.3
VCPKMT-205ENST00000569518 TSSC4Q9Y5U2 329 aaPredicted RBP16.95■□□□□ 0.3
VCPKMT-205ENST00000569518 K7EQG2 157 aa16.94■□□□□ 0.3
VCPKMT-205ENST00000569518 GZMBP10144 247 aa16.94■□□□□ 0.3
VCPKMT-205ENST00000569518 FOXA3P55318 350 aaPredicted RBP16.94■□□□□ 0.3
VCPKMT-205ENST00000569518 DEFB1P60022 68 aa16.94■□□□□ 0.3
VCPKMT-205ENST00000569518 COX19Q49B96 90 aa16.94■□□□□ 0.3
VCPKMT-205ENST00000569518 RASL11AQ6T310 242 aa16.94■□□□□ 0.3
VCPKMT-205ENST00000569518 TMEM136Q6ZRR5 245 aa16.94■□□□□ 0.3
VCPKMT-205ENST00000569518 RBPMS2Q6ZRY4 209 aaKnown RBP16.94■□□□□ 0.3
VCPKMT-205ENST00000569518 LENEPQ9Y5L5 61 aa16.94■□□□□ 0.3
VCPKMT-205ENST00000569518 HAX1O00165 279 aa16.93■□□□□ 0.3
VCPKMT-205ENST00000569518 TCF21O43680 179 aa16.93■□□□□ 0.3
VCPKMT-205ENST00000569518 WDR73Q6P4I2 378 aa16.93■□□□□ 0.3
VCPKMT-205ENST00000569518 OR8A1Q8NGG7 326 aa16.93■□□□□ 0.3
VCPKMT-205ENST00000569518 OR10J6PQ8NGY7 276 aa16.93■□□□□ 0.3
VCPKMT-205ENST00000569518 LINC00477Q96M19 166 aa16.93■□□□□ 0.3
VCPKMT-205ENST00000569518 SAV1Q9H4B6 383 aaPredicted RBP16.93■□□□□ 0.3
VCPKMT-205ENST00000569518 A0A1B0GXF2 115 aa16.93■□□□□ 0.3
VCPKMT-205ENST00000569518 ATP5L2Q7Z4Y8 100 aa16.93■□□□□ 0.3
VCPKMT-205ENST00000569518 A0A1W2PRX2 142 aa16.92■□□□□ 0.3
VCPKMT-205ENST00000569518 SNURFLB1AK76 121 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms