RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	C1orf134	Q5TEV5	83 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TEX261	Q6UWH6	196 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	AAED1	Q7RTV5	226 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TEN1	Q86WV5	123 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	ARL17A	Q8IVW1	177 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	DYNAP	Q8N1N2	210 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243		Q8N814	137 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	OR4B1	Q8NGF8	309 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	OTOS	Q8NHW6	89 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	DPH3	Q96FX2	82 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	NABP2	Q9BQ15	211 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	SLC50A1	Q9BRV3	221 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TMEM191A	Q9H0A3	160 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TAS2R8	Q9NYW2	309 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	HHLA3	Q9XRX5	114 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	ZFP30	Q9Y2G7	519 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	COL1A1	P02452	1464 aa	Predicted RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	NCAPD3	P42695	1498 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	ABCC10	Q5T3U5	1492 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	RIMS1	Q86UR5	1692 aa	Known RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	NYNRIN	Q9P2P1	1898 aa	Known RBP	0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	KIAA2026	Q5HYC2	2103 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	ATG2A	Q2TAZ0	1938 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	ANAPC1	Q9H1A4	1944 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	TMEM2	Q9UHN6	1383 aa		0.83	□□□□□ -2.28
UBR1-209	ENST00000569243	KIF13A	Q9H1H9	1805 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	ARHGAP32	A7KAX9	2087 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	PTPRS	Q13332	1948 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	PZP	P20742	1482 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	TMSB15B	A0A087X1C1	80 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243		A0A0D9SG52	128 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	HMSD	A8MTL9	139 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	C19orf84	I3L1E1	186 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243		M0R143	59 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	CDC42EP2	O14613	210 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	KLF7	O75840	302 aa	Predicted RBP	0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	MPC2	O95563	127 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	NCR2	O95944	276 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	TCL1B	O95988	128 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	IFNA17	P01571	189 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	TRAC	P01848	142 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	PMP2	P02689	132 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	CRP	P02741	224 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	TFF1	P04155	84 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	PYY	P10082	97 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	HIST1H1B	P16401	226 aa	Known RBP	0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	SSR2	P43308	183 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	HINT1	P49773	126 aa	Predicted RBP	0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	TPPP2	P59282	170 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	ROMO1	P60602	79 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	PKIA	P61925	76 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF791	Q3KP31	576 aa	Predicted RBP	0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	TMEM155	Q4W5P6	130 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	S100A7L2	Q5SY68	101 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	MRPL54	Q6P161	138 aa	Known RBP	0.82	□□□□□ -2.28
UBR1-209	ENST00000569243		Q6ZUT4	128 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	GTF2H5	Q6ZYL4	71 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	GKN2	Q86XP6	184 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	C8orf59	Q8N0T1	100 aa	Predicted RBP	0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	C10orf111	Q8N326	155 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	FAM19A2	Q8N3H0	131 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	KCNRG	Q8N5I3	272 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	LINC00301	Q8NCQ3	95 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	OR10AC1	Q8NH08	325 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	CCL4L1	Q8NHW4	92 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	LSM10	Q969L4	123 aa	Known RBP	0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	MRPL57	Q9BQC6	102 aa	Known RBP	0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	SNHG12	Q9BXW3	62 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	CST11	Q9H112	138 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	SLC35B3	Q9H1N7	401 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	RPL26L1	Q9UNX3	145 aa	Known RBP	0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	TPRKB	Q9Y3C4	175 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	FAM215A	Q9Y5M1	114 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	TANC2	Q9HCD6	1990 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	UBR2	Q8IWV8	1755 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	CIT	O14578	2027 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	WDR97	A6NE52	1622 aa		0.82	□□□□□ -2.28
UBR1-209	ENST00000569243	NCKAP5	O14513	1909 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	PIK3C2A	O00443	1686 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	RIC1	Q4ADV7	1423 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	MYOM2	P54296	1465 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	SCAF11	Q99590	1463 aa	Known RBP	0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	TRBV20-1	A0A075B6N2	111 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	TRAV30	A0A087WSZ9	112 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	C3orf85	A0A1B0GTC6	90 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	LOC107986453	A0A1B0GWG9	222 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	hDV103S1	A0JD37	113 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	OR51F1	A6NGY5	319 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243		A6NN06	94 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	IFITM5	A6NNB3	132 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	OOSP1	A8MZH6	123 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243		M0R233	179 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	GEMIN2	O14893	280 aa	Known RBP	0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	EDF1	O60869	148 aa	Known RBP	0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	ASAH2B	P0C7U1	165 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	COX6A1	P12074	109 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	NFYA	P23511	347 aa	Predicted RBP	0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	CKS2	P33552	79 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	FXYD2	P54710	66 aa		0.81	□□□□□ -2.28
UBR1-209	ENST00000569243	TMEM258	P61165	79 aa		0.81	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms