RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 NPVFQ9HCQ7 196 aa8.44□□□□□ -1.06
SNX29-207ENST00000568949 LY96Q9Y6Y9 160 aa8.44□□□□□ -1.06
SNX29-207ENST00000568949 PMS2P5A8MQ11 134 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 NPIPB6E9PJ23 425 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 SSNA1O43805 119 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 MBPP02686 304 aaPredicted RBP8.43□□□□□ -1.06
SNX29-207ENST00000568949 LEPP41159 167 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 BCAP31P51572 246 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 HBG1P69891 147 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 HBG2P69892 147 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 IFITM3Q01628 133 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 TMEM14EPQ6UXP3 125 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 STX12Q86Y82 276 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 ZNF680Q8NEM1 530 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 NMES1Q9C002 83 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 GSN-AS1Q9NRJ2 163 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 FUT9Q9Y231 359 aa8.43□□□□□ -1.06
SNX29-207ENST00000568949 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 IGLV5-52A0A0A0MRZ9 124 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 C7orf66A4D0T2 115 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 H3BP45 60 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 PLA2G1BP04054 148 aaKnown RBP8.42□□□□□ -1.06
SNX29-207ENST00000568949 S100A11P31949 105 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 CAV2P51636 162 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 SLAQ13239 276 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 MRPL23Q16540 153 aaKnown RBP8.42□□□□□ -1.06
SNX29-207ENST00000568949 PXDC1Q5TGL8 231 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 TEPPQ6URK8 271 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 PATE2Q6UY27 113 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 C11orf72Q8NBR9 251 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 PRO0255Q9UI72 69 aa8.42□□□□□ -1.06
SNX29-207ENST00000568949 LSM5Q9Y4Y9 91 aaKnown RBP8.42□□□□□ -1.06
SNX29-207ENST00000568949 SMCO3A2RU48 225 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 PRAC2D3DTV9 90 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 E5RGE8 158 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 K7EPK0 472 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 CCSO14618 274 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 SPINK4O60575 86 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 METTL15P1P0C7V9 234 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 CT45A10P0DMU9 189 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 EVI2AP22794 236 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 S100A10P60903 97 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 ATP6V1FQ16864 119 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 NEGR1Q7Z3B1 354 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 DEFB104AQ8WTQ1 72 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 ST6GAL2Q96JF0 529 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 SLC25A31Q9H0C2 315 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 ARL6Q9H0F7 186 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 RCL1Q9Y2P8 373 aaKnown RBP8.41□□□□□ -1.06
SNX29-207ENST00000568949 PXMP4Q9Y6I8 212 aa8.41□□□□□ -1.06
SNX29-207ENST00000568949 J3KRW8 73 aa8.4□□□□□ -1.06
SNX29-207ENST00000568949 GOSR2O14653 212 aa8.4□□□□□ -1.06
SNX29-207ENST00000568949 C1QBP02746 253 aa8.4□□□□□ -1.06
SNX29-207ENST00000568949 CRYBA4P53673 196 aa8.4□□□□□ -1.06
SNX29-207ENST00000568949 ANXA2RQ3ZCQ2 193 aa8.4□□□□□ -1.06
SNX29-207ENST00000568949 ZNF546Q86UE3 836 aa8.4□□□□□ -1.06
SNX29-207ENST00000568949 ASB13Q8WXK3 278 aa8.4□□□□□ -1.06
SNX29-207ENST00000568949 ARV1Q9H2C2 271 aa8.4□□□□□ -1.06
SNX29-207ENST00000568949 LYRM2Q9NU23 88 aaPredicted RBP8.4□□□□□ -1.06
SNX29-207ENST00000568949 LRCOL1A6NCL2 159 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 MPDU1O75352 247 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 SLC25A5P05141 298 aaKnown RBP8.39□□□□□ -1.07
SNX29-207ENST00000568949 SULT1A1P50225 295 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 TCL1AP56279 114 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 BAXQ07812 192 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 RAB32Q13637 225 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 RGS21Q2M5E4 152 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 BPIFA4PQ86YQ2 179 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 C10orf126Q8N4M7 172 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 EIF4E3Q8N5X7 224 aaKnown RBP8.39□□□□□ -1.07
SNX29-207ENST00000568949 FAM30AQ9NZY2 134 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 HHLA3Q9XRX5 114 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 KLF12Q9Y4X4 402 aa8.39□□□□□ -1.07
SNX29-207ENST00000568949 C7orf71A4D174 169 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 SLC17A3O00476 420 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 IGHV3-53P01767 116 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 SNRPCP09234 159 aaKnown RBP8.38□□□□□ -1.07
SNX29-207ENST00000568949 SLC38A11Q08AI6 406 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 IL15RAQ13261 267 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 IBA57Q5T440 356 aaKnown RBP8.38□□□□□ -1.07
SNX29-207ENST00000568949 Q6ZRG5 221 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 LINC00305Q7Z4B0 112 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 WFDC10BQ8IUB3 73 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 VGLL1Q99990 258 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 UQCC1Q9NVA1 299 aa8.38□□□□□ -1.07
SNX29-207ENST00000568949 PSCAO43653 123 aa8.37□□□□□ -1.07
SNX29-207ENST00000568949 IGLC2P0DOY2 106 aa8.37□□□□□ -1.07
SNX29-207ENST00000568949 RRAS2P62070 204 aaPredicted RBP8.37□□□□□ -1.07
SNX29-207ENST00000568949 FHL2Q14192 279 aa8.37□□□□□ -1.07
SNX29-207ENST00000568949 SAT2Q96F10 170 aaPredicted RBP8.37□□□□□ -1.07
SNX29-207ENST00000568949 C8orf49Q96NF6 230 aa8.37□□□□□ -1.07
SNX29-207ENST00000568949 KCNIP2Q9NS61 270 aa8.37□□□□□ -1.07
SNX29-207ENST00000568949 KLLNB2CW77 178 aa8.36□□□□□ -1.07
SNX29-207ENST00000568949 H3BTX0 84 aa8.36□□□□□ -1.07
SNX29-207ENST00000568949 CRYGDP07320 174 aa8.36□□□□□ -1.07
SNX29-207ENST00000568949 SRIP30626 198 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms