RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ICAM4Q14773 271 aa10.09□□□□□ -0.79
USB1-214ENST00000568848 TMEM252Q8N6L7 170 aa10.09□□□□□ -0.79
USB1-214ENST00000568848 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
USB1-214ENST00000568848 UBR4Q5T4S7 5183 aa10.08□□□□□ -0.8
USB1-214ENST00000568848 LRP1Q07954 4544 aaKnown RBP10.08□□□□□ -0.8
USB1-214ENST00000568848 TRGV2A0A075B6R0 118 aa10.08□□□□□ -0.8
USB1-214ENST00000568848 BTN1A1Q13410 526 aa10.08□□□□□ -0.8
USB1-214ENST00000568848 MIC13Q5XKP0 118 aa10.08□□□□□ -0.8
USB1-214ENST00000568848 LINC00305Q7Z4B0 112 aa10.08□□□□□ -0.8
USB1-214ENST00000568848 ZNF546Q86UE3 836 aa10.08□□□□□ -0.8
USB1-214ENST00000568848 C11orf72Q8NBR9 251 aa10.08□□□□□ -0.8
USB1-214ENST00000568848 TMEM37Q8WXS4 190 aa10.08□□□□□ -0.8
USB1-214ENST00000568848 GPN1Q9HCN4 374 aaPredicted RBP10.08□□□□□ -0.8
USB1-214ENST00000568848 LYRM2Q9NU23 88 aaPredicted RBP10.08□□□□□ -0.8
USB1-214ENST00000568848 TP53TG3Q9ULZ0 132 aa10.08□□□□□ -0.8
USB1-214ENST00000568848 HMCN2Q8NDA2 5059 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 INMT-MINDY4F8WBC2 141 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 CAMLGP49069 296 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 SULT1A1P50225 295 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 CD300CQ08708 224 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 OPCMLQ14982 345 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 WFDC10BQ8IUB3 73 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 UQCC1Q9NVA1 299 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 MRPL16Q9NX20 251 aaKnown RBP10.07□□□□□ -0.8
USB1-214ENST00000568848 FUT9Q9Y231 359 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 WDR83OSQ9Y284 106 aa10.07□□□□□ -0.8
USB1-214ENST00000568848 H3BNG1 76 aa10.06□□□□□ -0.8
USB1-214ENST00000568848 COX7A2P2O60397 106 aa10.06□□□□□ -0.8
USB1-214ENST00000568848 PXDC1Q5TGL8 231 aa10.06□□□□□ -0.8
USB1-214ENST00000568848 C8orf49Q96NF6 230 aa10.06□□□□□ -0.8
USB1-214ENST00000568848 UBE2L5PA0A1B0GUS4 154 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 M0R3E3 92 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 EREGO14944 169 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 S100A11P31949 105 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 NHLH2Q02577 135 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 BAXQ07812 192 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 VWC2Q2TAL6 325 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 LRRC37A5PQ49AS3 106 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 PRR9Q5T870 116 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 C10orf113Q5VZT2 155 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 LCN15Q6UWW0 184 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 DNAJC4Q9NNZ3 241 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 OR5AC2Q9NZP5 309 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 FAM30AQ9NZY2 134 aa10.05□□□□□ -0.8
USB1-214ENST00000568848 H0YIZ8 118 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 J3QL48 77 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 PAX4O43316 350 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 PRAF2O60831 178 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 IFNA5P01569 189 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 IGLC2P0DOY2 106 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 FGF7P21781 194 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 GCSHP23434 173 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 DAZ2Q13117 558 aaKnown RBP10.04□□□□□ -0.8
USB1-214ENST00000568848 RAB31Q13636 194 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 LYPD5Q6UWN5 251 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 Q6ZRG5 221 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 STX12Q86Y82 276 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 C20orf144Q9BQM9 153 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 MARVELD1Q9BSK0 173 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
USB1-214ENST00000568848 NPIPB6E9PJ23 425 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 RPL29P47914 159 aaKnown RBP10.03□□□□□ -0.8
USB1-214ENST00000568848 HBG1P69891 147 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 HBG2P69892 147 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 CDPF1Q6NVV7 123 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 Q6ZSN1 163 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 BPIFA4PQ86YQ2 179 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 SAT2Q96F10 170 aaPredicted RBP10.03□□□□□ -0.8
USB1-214ENST00000568848 SLC50A1Q9BRV3 221 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 NMES1Q9C002 83 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 SLC39A9Q9NUM3 307 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 ICOSQ9Y6W8 199 aa10.03□□□□□ -0.8
USB1-214ENST00000568848 C7orf71A4D174 169 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 E5RGE8 158 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 ZNF324O75467 553 aaPredicted RBP10.02□□□□□ -0.81
USB1-214ENST00000568848 SFTA3P0C7M3 94 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
USB1-214ENST00000568848 LEPP41159 167 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 H2BFSP57053 126 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 DEFA1P59665 94 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 DEFA3P59666 94 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 ATP6V1FQ16864 119 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 PXMP4Q9Y6I8 212 aa10.02□□□□□ -0.81
USB1-214ENST00000568848 SPINK4O60575 86 aa10.01□□□□□ -0.81
USB1-214ENST00000568848 FHL2Q14192 279 aa10.01□□□□□ -0.81
USB1-214ENST00000568848 OR5C1Q8NGR4 320 aa10.01□□□□□ -0.81
USB1-214ENST00000568848 OR1L4Q8NGR5 311 aa10.01□□□□□ -0.81
USB1-214ENST00000568848 THAP6Q8TBB0 222 aa10.01□□□□□ -0.81
USB1-214ENST00000568848 MSRB1Q9NZV6 116 aa10.01□□□□□ -0.81
USB1-214ENST00000568848 RNF24Q9Y225 148 aa10.01□□□□□ -0.81
USB1-214ENST00000568848 SSNA1O43805 119 aa10□□□□□ -0.81
USB1-214ENST00000568848 CXCL2P19875 107 aa10□□□□□ -0.81
USB1-214ENST00000568848 CRYBA4P53673 196 aa10□□□□□ -0.81
USB1-214ENST00000568848 CYCSP99999 105 aaKnown RBP10□□□□□ -0.81
USB1-214ENST00000568848 GCSAMLQ5JQS6 135 aa10□□□□□ -0.81
USB1-214ENST00000568848 CHAC2Q8WUX2 184 aa10□□□□□ -0.81
USB1-214ENST00000568848 PPP1R1CQ8WVI7 109 aa10□□□□□ -0.81
USB1-214ENST00000568848 PFDN5Q99471 154 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms