RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 WDR73Q6P4I2 378 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 C8orf86Q6ZUL3 223 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 TSKUQ8WUA8 353 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 GFRA4Q9GZZ7 299 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 SMPXQ9UHP9 88 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 TRAV8-1A0A0A6YYK1 113 aa11.12□□□□□ -0.63
COMMD4-221ENST00000567935 IGHV3-66A0A0C4DH42 116 aa11.12□□□□□ -0.63
COMMD4-221ENST00000567935 IZUMO1RA6ND01 250 aa11.12□□□□□ -0.63
COMMD4-221ENST00000567935 A8MWP6 167 aa11.12□□□□□ -0.63
COMMD4-221ENST00000567935 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
COMMD4-221ENST00000567935 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-221ENST00000567935 ACTL10Q5JWF8 245 aa11.12□□□□□ -0.63
COMMD4-221ENST00000567935 KLHDC1Q8N7A1 406 aa11.12□□□□□ -0.63
COMMD4-221ENST00000567935 SGK494Q96LW2 274 aa11.12□□□□□ -0.63
COMMD4-221ENST00000567935 KRTAP17-1Q9BYP8 105 aa11.12□□□□□ -0.63
COMMD4-221ENST00000567935 SAV1Q9H4B6 383 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-221ENST00000567935 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
COMMD4-221ENST00000567935 FAM181BA6NEQ2 426 aa11.11□□□□□ -0.63
COMMD4-221ENST00000567935 C5orf52A6NGY3 159 aa11.11□□□□□ -0.63
COMMD4-221ENST00000567935 PHOX2AO14813 284 aa11.11□□□□□ -0.63
COMMD4-221ENST00000567935 Q6ZSV7 163 aa11.11□□□□□ -0.63
COMMD4-221ENST00000567935 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
COMMD4-221ENST00000567935 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
COMMD4-221ENST00000567935 RHPN1-AS1Q9BWJ2 59 aa11.11□□□□□ -0.63
COMMD4-221ENST00000567935 PPP1R14DQ9NXH3 145 aa11.11□□□□□ -0.63
COMMD4-221ENST00000567935 IGHV3OR16-13A0A075B7E8 117 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 IGHV3-49A0A0A0MS15 119 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 IGHV3-74A0A0B4J1X5 117 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST1H2BKO60814 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST1H2BJP06899 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST1H2BOP23527 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST1H2BBP33778 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST1H2BDP58876 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST1H2BCP62807 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST2H2BEQ16778 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-221ENST00000567935 C10orf99Q6UWK7 81 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST1H2BHQ93079 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 DUX5Q96PT3 197 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST1H2BNQ99877 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 HIST1H2BMQ99879 126 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 GNB1LQ9BYB4 327 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 NRN1Q9NPD7 142 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 TRAPPC1Q9Y5R8 145 aa11.1□□□□□ -0.63
COMMD4-221ENST00000567935 IGKV2-40A0A087WW87 121 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-221ENST00000567935 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 UBE2CO00762 179 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 IGKV2D-40P01614 121 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-221ENST00000567935 TRGC1P0CF51 173 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 Q6AWC8 147 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-221ENST00000567935 C4orf3Q8WVX3 66 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 FRZBQ92765 325 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 ZC2HC1AQ96GY0 325 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 PRR25Q96S07 402 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 C16orf95Q9H693 158 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 LENEPQ9Y5L5 61 aa11.09□□□□□ -0.63
COMMD4-221ENST00000567935 SOCS3O14543 225 aa11.08□□□□□ -0.64
COMMD4-221ENST00000567935 OVOL1O14753 267 aa11.08□□□□□ -0.64
COMMD4-221ENST00000567935 SMUG1Q53HV7 270 aa11.08□□□□□ -0.64
COMMD4-221ENST00000567935 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
COMMD4-221ENST00000567935 FAM162BQ5T6X4 162 aa11.08□□□□□ -0.64
COMMD4-221ENST00000567935 C9orf47Q6ZRZ4 202 aa11.08□□□□□ -0.64
COMMD4-221ENST00000567935 TMEM213A2RRL7 107 aa11.07□□□□□ -0.64
COMMD4-221ENST00000567935 M0QZ24 198 aa11.07□□□□□ -0.64
COMMD4-221ENST00000567935 HLA-DQA1P01909 254 aa11.07□□□□□ -0.64
COMMD4-221ENST00000567935 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
COMMD4-221ENST00000567935 ID1P41134 155 aa11.07□□□□□ -0.64
COMMD4-221ENST00000567935 FOXA3P55318 350 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-221ENST00000567935 RPS20P60866 119 aaKnown RBP11.07□□□□□ -0.64
COMMD4-221ENST00000567935 SNRPEP62304 92 aaKnown RBP11.07□□□□□ -0.64
COMMD4-221ENST00000567935 TMEM78Q5T7P6 136 aa11.07□□□□□ -0.64
COMMD4-221ENST00000567935 LINC00322Q6ZN03 302 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-221ENST00000567935 RBPMS2Q6ZRY4 209 aaKnown RBP11.07□□□□□ -0.64
COMMD4-221ENST00000567935 OR2D3Q8NGH3 330 aa11.07□□□□□ -0.64
COMMD4-221ENST00000567935 NEU1Q99519 415 aa11.07□□□□□ -0.64
COMMD4-221ENST00000567935 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 A0A087WW49 117 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 HIGD1CA8MV81 97 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 HOXD3P31249 432 aaPredicted RBP11.06□□□□□ -0.64
COMMD4-221ENST00000567935 ZNF138P52744 262 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 TCL1AP56279 114 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 FABP9Q0Z7S8 132 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 COA6Q5JTJ3 125 aaKnown RBP11.06□□□□□ -0.64
COMMD4-221ENST00000567935 TCF24Q7RTU0 167 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 NUP35Q8NFH5 326 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 ASCL2Q99929 193 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 VGLL1Q99990 258 aa11.06□□□□□ -0.64
COMMD4-221ENST00000567935 TRBV7-9A0A0J9YWB2 115 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 A0A1B0GW15 77 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 ZNF705FA8MVS1 300 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-221ENST00000567935 SNURFLB1AK76 121 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 LINC01619G3V211 115 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 NDUFA7O95182 113 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 CA1P00915 261 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-221ENST00000567935 HOXA5P20719 270 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 NDUFA6P56556 154 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms