RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
GTF3C1-207ENST00000567806 CXCL2P19875 107 aa13.22□□□□□ -0.29
GTF3C1-207ENST00000567806 CCL18P55774 89 aa13.22□□□□□ -0.29
GTF3C1-207ENST00000567806 RPL7L1Q6DKI1 246 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-207ENST00000567806 SLC51BQ86UW2 128 aa13.22□□□□□ -0.29
GTF3C1-207ENST00000567806 HSD17B11Q8NBQ5 300 aa13.22□□□□□ -0.29
GTF3C1-207ENST00000567806 UHRF2Q96PU4 802 aa13.22□□□□□ -0.29
GTF3C1-207ENST00000567806 A0A087X0K7 114 aa13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 PLAC8L1A1L4L8 177 aa13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 M6PRP20645 277 aa13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 ATP6V0CP27449 155 aa13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 TAS2R45P59539 299 aa13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 LGALSLQ3ZCW2 172 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 FFAR4Q5NUL3 377 aa13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 LINC00305Q7Z4B0 112 aa13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 STOML3Q8TAV4 291 aa13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 C16orf74Q96GX8 76 aa13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 TIMM8BQ9Y5J9 83 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-207ENST00000567806 MUC4Q99102 2169 aa13.21□□□□□ -0.3
GTF3C1-207ENST00000567806 NBDYA0A0U1RRE5 68 aa13.2□□□□□ -0.3
GTF3C1-207ENST00000567806 A0A1W2PPV4 95 aa13.2□□□□□ -0.3
GTF3C1-207ENST00000567806 UMAD1C9J7I0 102 aa13.2□□□□□ -0.3
GTF3C1-207ENST00000567806 SEC11BP0C7V7 166 aa13.2□□□□□ -0.3
GTF3C1-207ENST00000567806 BPIFA4PQ86YQ2 179 aa13.2□□□□□ -0.3
GTF3C1-207ENST00000567806 ZNRF2Q8NHG8 242 aa13.2□□□□□ -0.3
GTF3C1-207ENST00000567806 RPUSD4Q96CM3 377 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-207ENST00000567806 NACAE9PAV3 2078 aa13.2□□□□□ -0.3
GTF3C1-207ENST00000567806 CDKN1BP46527 198 aa13.19□□□□□ -0.3
GTF3C1-207ENST00000567806 TNP2Q05952 138 aa13.19□□□□□ -0.3
GTF3C1-207ENST00000567806 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
GTF3C1-207ENST00000567806 C6orf223Q8N319 242 aa13.19□□□□□ -0.3
GTF3C1-207ENST00000567806 CYTL1Q9NRR1 136 aa13.19□□□□□ -0.3
GTF3C1-207ENST00000567806 AKR1C8PQ5T2L2 129 aa13.18□□□□□ -0.3
GTF3C1-207ENST00000567806 PATE2Q6UY27 113 aa13.18□□□□□ -0.3
GTF3C1-207ENST00000567806 C9orf62Q8N4C0 152 aa13.18□□□□□ -0.3
GTF3C1-207ENST00000567806 TMEM37Q8WXS4 190 aa13.18□□□□□ -0.3
GTF3C1-207ENST00000567806 NOP10Q9NPE3 64 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-207ENST00000567806 C16orf90A8MZG2 172 aa13.17□□□□□ -0.3
GTF3C1-207ENST00000567806 PRB4P10163 310 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-207ENST00000567806 RAB5CP51148 216 aa13.17□□□□□ -0.3
GTF3C1-207ENST00000567806 GUK1Q16774 197 aa13.17□□□□□ -0.3
GTF3C1-207ENST00000567806 DPPA3Q6W0C5 159 aa13.17□□□□□ -0.3
GTF3C1-207ENST00000567806 FUT9Q9Y231 359 aa13.17□□□□□ -0.3
GTF3C1-207ENST00000567806 LINC00588Q9Y4M8 146 aa13.17□□□□□ -0.3
GTF3C1-207ENST00000567806 H7BYZ3 331 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 KHDC3LQ587J8 217 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 LCN15Q6UWW0 184 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 CCDC28AQ8IWP9 274 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 OR10G4Q8NGN3 311 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 OR10G9Q8NGN4 311 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 OR10G7Q8NGN6 311 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 OR10J6PQ8NGY7 276 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 RNF141Q8WVD5 230 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 PHYHIPLQ96FC7 376 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 SLC50A1Q9BRV3 221 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 ACTR3CQ9C0K3 210 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 ZNF331Q9NQX6 463 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 TMEM14CQ9P0S9 112 aa13.16□□□□□ -0.3
GTF3C1-207ENST00000567806 MRPS12O15235 138 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-207ENST00000567806 SNRPCP09234 159 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-207ENST00000567806 OR5I1Q13606 314 aa13.15□□□□□ -0.3
GTF3C1-207ENST00000567806 PQLC2Q6ZP29 291 aa13.15□□□□□ -0.3
GTF3C1-207ENST00000567806 SSX7Q7RTT5 188 aa13.15□□□□□ -0.3
GTF3C1-207ENST00000567806 TMEM263Q8WUH6 116 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-207ENST00000567806 C20orf144Q9BQM9 153 aa13.15□□□□□ -0.3
GTF3C1-207ENST00000567806 CD300CQ08708 224 aa13.14□□□□□ -0.31
GTF3C1-207ENST00000567806 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-207ENST00000567806 TEX46H3BTG2 121 aa13.13□□□□□ -0.31
GTF3C1-207ENST00000567806 CDC34P49427 236 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-207ENST00000567806 Q9H8V8 135 aa13.13□□□□□ -0.31
GTF3C1-207ENST00000567806 ZNF253O75346 499 aa13.12□□□□□ -0.31
GTF3C1-207ENST00000567806 PDE6HQ13956 83 aa13.12□□□□□ -0.31
GTF3C1-207ENST00000567806 KRTAP4-5Q9BYR2 181 aa13.12□□□□□ -0.31
GTF3C1-207ENST00000567806 TRAV26-1A0A087WT03 109 aa13.11□□□□□ -0.31
GTF3C1-207ENST00000567806 H3BTX0 84 aa13.11□□□□□ -0.31
GTF3C1-207ENST00000567806 HIST1H1EP10412 219 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-207ENST00000567806 KIR3DS1Q14943 382 aa13.11□□□□□ -0.31
GTF3C1-207ENST00000567806 RXFP4Q8TDU9 374 aa13.11□□□□□ -0.31
GTF3C1-207ENST00000567806 SH3BGRL3Q9H299 93 aa13.11□□□□□ -0.31
GTF3C1-207ENST00000567806 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
GTF3C1-207ENST00000567806 ABCA13Q86UQ4 5058 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 CTXND1A0A1B0GTU2 59 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 GAGE12BA1L429 117 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 SNURFLB1AK76 121 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 PRAC2D3DTV9 90 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 OR7C2O60412 319 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 CDK2AP2O75956 126 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 GAGE7O76087 117 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 GAGE12FP0CL80 117 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 GAGE12GP0CL81 117 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 GAGE12IP0CL82 117 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 RAB2AP61019 212 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 GFI1BQ5VTD9 330 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 FAM122CQ6P4D5 195 aa13.1□□□□□ -0.31
GTF3C1-207ENST00000567806 A0A0J9YY99 117 aa13.09□□□□□ -0.31
GTF3C1-207ENST00000567806 CXorf1O96002 111 aa13.09□□□□□ -0.31
GTF3C1-207ENST00000567806 LEPP41159 167 aa13.09□□□□□ -0.31
GTF3C1-207ENST00000567806 TTC32Q5I0X7 151 aa13.09□□□□□ -0.31
GTF3C1-207ENST00000567806 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
GTF3C1-207ENST00000567806 ZNF503Q96F45 646 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms