RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 IQCF2Q8IXL9 164 aa12.41□□□□□ -0.42
COMMD4-220ENST00000567720 Q8TAT8 98 aa12.41□□□□□ -0.42
COMMD4-220ENST00000567720 FAM19A4Q96LR4 140 aa12.41□□□□□ -0.42
COMMD4-220ENST00000567720 MAP1LC3BQ9GZQ8 125 aa12.41□□□□□ -0.42
COMMD4-220ENST00000567720 AGPAT4-IT1Q9H0P7 198 aa12.41□□□□□ -0.42
COMMD4-220ENST00000567720 TMEM167BQ9NRX6 74 aa12.41□□□□□ -0.42
COMMD4-220ENST00000567720 GGTLC3B5MD39 225 aa12.4□□□□□ -0.42
COMMD4-220ENST00000567720 DIRC3C9JPN6 131 aa12.4□□□□□ -0.42
COMMD4-220ENST00000567720 GNG5P63218 68 aa12.4□□□□□ -0.42
COMMD4-220ENST00000567720 ZFAND6Q6FIF0 208 aa12.4□□□□□ -0.42
COMMD4-220ENST00000567720 TMPRSS5Q9H3S3 457 aa12.4□□□□□ -0.42
COMMD4-220ENST00000567720 RPH3ALQ9UNE2 315 aa12.4□□□□□ -0.42
COMMD4-220ENST00000567720 LYSTQ99698 3801 aa12.4□□□□□ -0.42
COMMD4-220ENST00000567720 PGPA6NDG6 321 aa12.39□□□□□ -0.43
COMMD4-220ENST00000567720 UMAD1C9J7I0 102 aa12.39□□□□□ -0.43
COMMD4-220ENST00000567720 C3orf84H3BNL1 204 aa12.39□□□□□ -0.43
COMMD4-220ENST00000567720 J3KRW8 73 aa12.39□□□□□ -0.43
COMMD4-220ENST00000567720 LEPP41159 167 aa12.39□□□□□ -0.43
COMMD4-220ENST00000567720 CSN1S1P47710 185 aa12.39□□□□□ -0.43
COMMD4-220ENST00000567720 TMEM208Q9BTX3 173 aa12.39□□□□□ -0.43
COMMD4-220ENST00000567720 RBAKDNA6NC62 111 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 SLC25A5P05141 298 aaKnown RBP12.38□□□□□ -0.43
COMMD4-220ENST00000567720 TSPOP30536 169 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 FAM74A1Q5RGS3 127 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 CASC10Q5T4H9 136 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 TMEM78Q5T7P6 136 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 PRR9Q5T870 116 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 FAM213BQ8TBF2 198 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 LINC00477Q96M19 166 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 ZNF492Q9P255 531 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 CELA1Q9UNI1 258 aa12.38□□□□□ -0.43
COMMD4-220ENST00000567720 YTHDF2Q9Y5A9 579 aaKnown RBP12.38□□□□□ -0.43
COMMD4-220ENST00000567720 SMIM9A6NGZ8 99 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 KLLNB2CW77 178 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 HBE1P02100 147 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 PRM2P04554 102 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 CRISP2P16562 243 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 NKX2-5P52952 324 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-220ENST00000567720 PMS2P11Q13670 270 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 GOLT1AQ6ZVE7 132 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 C5orf17Q8NAS9 161 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 CMTM2Q8TAZ6 248 aa12.37□□□□□ -0.43
COMMD4-220ENST00000567720 LOC102723971A0A1B0GUV8 181 aa12.36□□□□□ -0.43
COMMD4-220ENST00000567720 ZNF138P52744 262 aa12.36□□□□□ -0.43
COMMD4-220ENST00000567720 NANOS2P60321 138 aaKnown RBP12.36□□□□□ -0.43
COMMD4-220ENST00000567720 UBE2G2P60604 165 aa12.36□□□□□ -0.43
COMMD4-220ENST00000567720 BTN1A1Q13410 526 aa12.36□□□□□ -0.43
COMMD4-220ENST00000567720 TMEM256Q8N2U0 113 aa12.36□□□□□ -0.43
COMMD4-220ENST00000567720 C20orf144Q9BQM9 153 aa12.36□□□□□ -0.43
COMMD4-220ENST00000567720 ALMS1Q8TCU4 4167 aa12.36□□□□□ -0.43
COMMD4-220ENST00000567720 SACSQ9NZJ4 4579 aa12.35□□□□□ -0.43
COMMD4-220ENST00000567720 TRAV8-1A0A0A6YYK1 113 aa12.35□□□□□ -0.43
COMMD4-220ENST00000567720 A0A1W2PRE2 83 aa12.35□□□□□ -0.43
COMMD4-220ENST00000567720 ZNF705GA8MUZ8 300 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-220ENST00000567720 RRN3P1Q2M238 152 aa12.35□□□□□ -0.43
COMMD4-220ENST00000567720 DPPA3Q6W0C5 159 aa12.35□□□□□ -0.43
COMMD4-220ENST00000567720 ARL6IP6Q8N6S5 226 aa12.35□□□□□ -0.43
COMMD4-220ENST00000567720 C11orf45Q8TAV5 145 aa12.35□□□□□ -0.43
COMMD4-220ENST00000567720 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
COMMD4-220ENST00000567720 A0A1B0GV50 99 aa12.34□□□□□ -0.43
COMMD4-220ENST00000567720 C7orf71A4D174 169 aa12.34□□□□□ -0.43
COMMD4-220ENST00000567720 FAM74A7A6NL05 159 aa12.34□□□□□ -0.43
COMMD4-220ENST00000567720 TCRAP04437 139 aa12.34□□□□□ -0.43
COMMD4-220ENST00000567720 MBD3L1Q8WWY6 194 aa12.34□□□□□ -0.43
COMMD4-220ENST00000567720 DNAH1Q9P2D7 4330 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 TRBV7-9A0A0J9YWB2 115 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 PLAC8L1A1L4L8 177 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 TMEM189A5PLL7 270 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 CXorf65A6NEN9 183 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 H7BYZ3 331 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 AZU1P20160 251 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 EMP1P54849 157 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 TAS2R60P59551 318 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 SUMO1P63165 101 aaKnown RBP12.33□□□□□ -0.44
COMMD4-220ENST00000567720 SFT2D1Q8WV19 159 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 LINC01587Q99440 93 aa12.33□□□□□ -0.44
COMMD4-220ENST00000567720 NMBP08949 121 aa12.32□□□□□ -0.44
COMMD4-220ENST00000567720 SULT1A2P50226 295 aa12.32□□□□□ -0.44
COMMD4-220ENST00000567720 EIF5AL1Q6IS14 154 aaKnown RBP12.32□□□□□ -0.44
COMMD4-220ENST00000567720 Q6ZQT7 251 aa12.32□□□□□ -0.44
COMMD4-220ENST00000567720 NIPSNAP3BQ9BS92 247 aa12.32□□□□□ -0.44
COMMD4-220ENST00000567720 SERTM2A0A1B0GWG4 89 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 ZNF324O75467 553 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-220ENST00000567720 GPX1P07203 203 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 H2AFB1P0C5Y9 115 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 RNASE4P34096 147 aaKnown RBP12.31□□□□□ -0.44
COMMD4-220ENST00000567720 ZNF767PQ75MW2 155 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 CYB561D1Q8N8Q1 229 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 RNASE8Q8TDE3 154 aaKnown RBP12.31□□□□□ -0.44
COMMD4-220ENST00000567720 TVP23CQ96ET8 276 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 SGK494Q96LW2 274 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 ATG101Q9BSB4 218 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 DKK2Q9UBU2 259 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 EPDR1Q9UM22 224 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 LENEPQ9Y5L5 61 aa12.31□□□□□ -0.44
COMMD4-220ENST00000567720 ARL2-SNX15V9GYD0 113 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms