RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ZNF98A6NK75 572 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 TEX46H3BTG2 121 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 RGS13O14921 159 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 OR7C2O60412 319 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 OXTP01178 125 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 NMBP08949 121 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 SNRPCP09234 159 aaKnown RBP6.84□□□□□ -1.31
CAPN3-216ENST00000567071 H2AFB1P0C5Y9 115 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 ARL14EPLP0DKL9 152 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 PYYP10082 97 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 NPPCP23582 126 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 PAFAH1B2P68402 229 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 SFT2D1Q8WV19 159 aa6.84□□□□□ -1.31
CAPN3-216ENST00000567071 H3BTX0 84 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 K7EMT4 169 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 STAG3L2P0CL84 134 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 STAG3L3P0CL85 134 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 CRYBB3P26998 211 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 CCL18P55774 89 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 TAS2R45P59539 299 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 RAB14P61106 215 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 UBE2L3P68036 154 aaKnown RBP6.83□□□□□ -1.32
CAPN3-216ENST00000567071 BLOC1S1P78537 153 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 KHDC3LQ587J8 217 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 TMEM88Q6PEY1 159 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 OR8I2Q8N0Y5 310 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 LRRC20Q8TCA0 184 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 SAT2Q96F10 170 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-216ENST00000567071 NARS2Q96I59 477 aaKnown RBP6.83□□□□□ -1.32
CAPN3-216ENST00000567071 FAM167A-AS1Q96KT0 104 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 TMPRSS5Q9H3S3 457 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 SMPXQ9UHP9 88 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 U3KQE9 123 aa6.83□□□□□ -1.32
CAPN3-216ENST00000567071 IGKV3-7A0A075B6H7 116 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 TMEM189A5PLL7 270 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 BUB3O43684 328 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 OR10J4P0C629 311 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 GCHFRP30047 84 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 S100A7P31151 101 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 ERVFC1-1P60608 527 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 S100A7AQ86SG5 101 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 MBD3L1Q8WWY6 194 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 GRAMD2BQ96HH9 432 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 PAXXQ9BUH6 204 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 RHPN1-AS1Q9BWJ2 59 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 PFDN2Q9UHV9 154 aa6.82□□□□□ -1.32
CAPN3-216ENST00000567071 A0A1W2PS18 150 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 CHEK1O14757 476 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 CXorf1O96002 111 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 HBE1P02100 147 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 RPL7P18124 248 aaKnown RBP6.81□□□□□ -1.32
CAPN3-216ENST00000567071 KRTAP10-1P60331 282 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 UBE2G2P60604 165 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 CCL20P78556 96 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 CLLU1Q5K131 121 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 C16orf54Q6UWD8 224 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 PQLC2Q6ZP29 291 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 TCF24Q7RTU0 167 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 BPIFA4PQ86YQ2 179 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 BLNKQ8WV28 456 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 GLMPQ8WWB7 406 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 FXYD5Q96DB9 178 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 NIPSNAP3BQ9BS92 247 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 OR51M1Q9H341 326 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 TMEM231Q9H6L2 316 aa6.81□□□□□ -1.32
CAPN3-216ENST00000567071 H3BQ15 152 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 MRPS12O15235 138 aaKnown RBP6.8□□□□□ -1.32
CAPN3-216ENST00000567071 GALR1P47211 349 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 EMP1P54849 157 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 DEFB131AP59861 70 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
CAPN3-216ENST00000567071 SIGLEC15Q6ZMC9 328 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 GBGT1Q8N5D6 347 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 CLEC5AQ9NY25 188 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 TMEM14CQ9P0S9 112 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 GNG13Q9P2W3 67 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 LRP2P98164 4655 aa6.8□□□□□ -1.32
CAPN3-216ENST00000567071 LRP1Q07954 4544 aaKnown RBP6.79□□□□□ -1.32
CAPN3-216ENST00000567071 TRAV1-1A0A0B4J248 108 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 DNASE2O00115 360 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-216ENST00000567071 SLC17A3O00476 420 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 GIG44P09565 113 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-216ENST00000567071 IGLC2P0DOY2 106 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 FUSP35637 526 aaKnown RBP eCLIP6.79□□□□□ -1.32
CAPN3-216ENST00000567071 HAMPP81172 84 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 C1orf194Q5T5A4 169 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 STXBP6Q8NFX7 210 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 LYPD6BQ8NI32 183 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 C1QTNF4Q9BXJ3 329 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 TMEM167BQ9NRX6 74 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 ZNF586Q9NXT0 402 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 RNF24Q9Y225 148 aa6.79□□□□□ -1.32
CAPN3-216ENST00000567071 A0A1W2PPQ1 181 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 HELTA6NFD8 242 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 CD5P06127 495 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 NBEAP1P0C6P0 100 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 HIST1H1EP10412 219 aaKnown RBP6.78□□□□□ -1.32
CAPN3-216ENST00000567071 GCSHP23434 173 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 PSMB3P49720 205 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 TOR2AQ5JU69 321 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms