RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 A0A0J9YWU9 116 aa11.88□□□□□ -0.51
SCAMP2-208ENST00000566557 LEPP41159 167 aa11.88□□□□□ -0.51
SCAMP2-208ENST00000566557 GNG5P63218 68 aa11.88□□□□□ -0.51
SCAMP2-208ENST00000566557 DPPA3Q6W0C5 159 aa11.88□□□□□ -0.51
SCAMP2-208ENST00000566557 CSNK1G2-AS1Q8NCQ2 148 aa11.88□□□□□ -0.51
SCAMP2-208ENST00000566557 RXFP4Q8TDU9 374 aa11.88□□□□□ -0.51
SCAMP2-208ENST00000566557 SFT2D1Q8WV19 159 aa11.88□□□□□ -0.51
SCAMP2-208ENST00000566557 IGF2BP2-AS1Q96M15 143 aa11.88□□□□□ -0.51
SCAMP2-208ENST00000566557 HUWE1Q7Z6Z7 4374 aaKnown RBP11.88□□□□□ -0.51
SCAMP2-208ENST00000566557 TSPOP30536 169 aa11.87□□□□□ -0.51
SCAMP2-208ENST00000566557 CDKN1BP46527 198 aa11.87□□□□□ -0.51
SCAMP2-208ENST00000566557 Q8TAT8 98 aa11.87□□□□□ -0.51
SCAMP2-208ENST00000566557 VGLL1Q99990 258 aa11.87□□□□□ -0.51
SCAMP2-208ENST00000566557 DIRC3C9JPN6 131 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 DEFB4AO15263 64 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 H2AFB1P0C5Y9 115 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 CT45A10P0DMU9 189 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 GOLT1AQ6ZVE7 132 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 SUN5Q8TC36 379 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 LINC00477Q96M19 166 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 AGPAT4-IT1Q9H0P7 198 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 EDA2RQ9HAV5 297 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
SCAMP2-208ENST00000566557 IGHV4-28A0A0C4DH34 117 aa11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 ZNF705EA8MWA4 302 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 GGTLC3B5MD39 225 aa11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 CRXO43186 299 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 MIFP14174 115 aa11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 RAB5CP51148 216 aa11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 SUMO1P63165 101 aaKnown RBP11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 C9orf47Q6ZRZ4 202 aa11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 C1orf158Q8N1D5 194 aa11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 C5orf17Q8NAS9 161 aa11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 ODF3Q96PU9 254 aa11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 YTHDF2Q9Y5A9 579 aaKnown RBP11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 X6R8D5 127 aa11.85□□□□□ -0.51
SCAMP2-208ENST00000566557 A0A1W2PRE2 83 aa11.84□□□□□ -0.51
SCAMP2-208ENST00000566557 RBAKDNA6NC62 111 aa11.84□□□□□ -0.51
SCAMP2-208ENST00000566557 IFNA7P01567 189 aa11.84□□□□□ -0.51
SCAMP2-208ENST00000566557 SULT1A2P50226 295 aa11.84□□□□□ -0.51
SCAMP2-208ENST00000566557 ZNF138P52744 262 aa11.84□□□□□ -0.51
SCAMP2-208ENST00000566557 ALKAL2Q6UX46 152 aa11.84□□□□□ -0.51
SCAMP2-208ENST00000566557 MBD3L1Q8WWY6 194 aa11.84□□□□□ -0.51
SCAMP2-208ENST00000566557 HBE1P02100 147 aa11.83□□□□□ -0.52
SCAMP2-208ENST00000566557 KIR3DS1Q14943 382 aa11.83□□□□□ -0.52
SCAMP2-208ENST00000566557 GFI1BQ5VTD9 330 aa11.83□□□□□ -0.52
SCAMP2-208ENST00000566557 CST9LP1Q5W188 147 aa11.83□□□□□ -0.52
SCAMP2-208ENST00000566557 ZNF705AQ6ZN79 300 aaPredicted RBP11.83□□□□□ -0.52
SCAMP2-208ENST00000566557 Q8NAQ8 132 aa11.83□□□□□ -0.52
SCAMP2-208ENST00000566557 ZNF492Q9P255 531 aa11.83□□□□□ -0.52
SCAMP2-208ENST00000566557 TRAV12-3A0A0B4J271 114 aa11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 FAM74A7A6NL05 159 aa11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 TEX46H3BTG2 121 aa11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 K7EQM0 130 aa11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 RBMY1A1P0DJD3 496 aaKnown RBP11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 RBMY1CP0DJD4 496 aa11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 HTN1P15515 57 aa11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 RBMY1FQ15415 496 aaKnown RBP11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 LINC01587Q99440 93 aa11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 C11orf68Q9H3H3 251 aaKnown RBP11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 CSMD3Q7Z407 3707 aa11.82□□□□□ -0.52
SCAMP2-208ENST00000566557 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 C7orf71A4D174 169 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 PAGE4O60829 102 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 TCRAP04437 139 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 GPX1P07203 203 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 EMP1P54849 157 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 BTN1A1Q13410 526 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 RRN3P1Q2M238 152 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 TMEM256Q8N2U0 113 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 ARL6IP6Q8N6S5 226 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 CYB561D1Q8N8Q1 229 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 SGK494Q96LW2 274 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 NIPSNAP3BQ9BS92 247 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 EPDR1Q9UM22 224 aa11.81□□□□□ -0.52
SCAMP2-208ENST00000566557 LOC102723971A0A1B0GUV8 181 aa11.8□□□□□ -0.52
SCAMP2-208ENST00000566557 SERTM2A0A1B0GWG4 89 aa11.8□□□□□ -0.52
SCAMP2-208ENST00000566557 ZNF705GA8MUZ8 300 aaPredicted RBP11.8□□□□□ -0.52
SCAMP2-208ENST00000566557 RNASE4P34096 147 aaKnown RBP11.8□□□□□ -0.52
SCAMP2-208ENST00000566557 ATP5G3P48201 142 aa11.8□□□□□ -0.52
SCAMP2-208ENST00000566557 NEU1Q99519 415 aa11.8□□□□□ -0.52
SCAMP2-208ENST00000566557 ATG101Q9BSB4 218 aa11.8□□□□□ -0.52
SCAMP2-208ENST00000566557 GNG13Q9P2W3 67 aa11.8□□□□□ -0.52
SCAMP2-208ENST00000566557 SMIM9A6NGZ8 99 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 PEX7O00628 323 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 CRISP2P16562 243 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 PPT1P50897 306 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 PMS2P11Q13670 270 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 PRR9Q5T870 116 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 ZFAND6Q6FIF0 208 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 IL17DQ8TAD2 202 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 FAM19A4Q96LR4 140 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 C20orf144Q9BQM9 153 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 NDFIP1Q9BT67 221 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 HYDINQ4G0P3 5121 aa11.79□□□□□ -0.52
SCAMP2-208ENST00000566557 KLLNB2CW77 178 aa11.78□□□□□ -0.52
SCAMP2-208ENST00000566557 F6UZH7 168 aa11.78□□□□□ -0.52
SCAMP2-208ENST00000566557 H7BYZ3 331 aa11.78□□□□□ -0.52
SCAMP2-208ENST00000566557 PRM2P04554 102 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms