RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CMTM2Q8TAZ6 248 aa15.2■□□□□ 0.02
SHCBP1-205ENST00000566016 FAM19A4Q96LR4 140 aa15.2■□□□□ 0.02
SHCBP1-205ENST00000566016 AGPAT4-IT1Q9H0P7 198 aa15.2■□□□□ 0.02
SHCBP1-205ENST00000566016 TRAV12-2A0A075B6T6 113 aa15.2■□□□□ 0.02
SHCBP1-205ENST00000566016 TRBV7-9A0A0J9YWB2 115 aa15.2■□□□□ 0.02
SHCBP1-205ENST00000566016 PGPA6NDG6 321 aa15.2■□□□□ 0.02
SHCBP1-205ENST00000566016 NMBP08949 121 aa15.2■□□□□ 0.02
SHCBP1-205ENST00000566016 IGHV3OR16-12A0A075B7B8 117 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 TMEM189A5PLL7 270 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 MAP1LC3B2A6NCE7 125 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 DIRC3C9JPN6 131 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 HBE1P02100 147 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 CRISP2P16562 243 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 ERCC8Q13216 396 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 EIF5AL1Q6IS14 154 aaKnown RBP15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 TMED6Q8WW62 240 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 TMEM208Q9BTX3 173 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 MAP1LC3BQ9GZQ8 125 aa15.19■□□□□ 0.02
SHCBP1-205ENST00000566016 A0A1W2PRE2 83 aa15.18■□□□□ 0.02
SHCBP1-205ENST00000566016 CASC10Q5T4H9 136 aa15.18■□□□□ 0.02
SHCBP1-205ENST00000566016 GFI1BQ5VTD9 330 aa15.18■□□□□ 0.02
SHCBP1-205ENST00000566016 SLC51BQ86UW2 128 aa15.18■□□□□ 0.02
SHCBP1-205ENST00000566016 C9orf62Q8N4C0 152 aa15.18■□□□□ 0.02
SHCBP1-205ENST00000566016 C5orf17Q8NAS9 161 aa15.18■□□□□ 0.02
SHCBP1-205ENST00000566016 VGLL1Q99990 258 aa15.18■□□□□ 0.02
SHCBP1-205ENST00000566016 PLA2G2EQ9NZK7 142 aa15.18■□□□□ 0.02
SHCBP1-205ENST00000566016 ZNF492Q9P255 531 aa15.18■□□□□ 0.02
SHCBP1-205ENST00000566016 KLLNB2CW77 178 aa15.17■□□□□ 0.02
SHCBP1-205ENST00000566016 DEFB4AO15263 64 aa15.17■□□□□ 0.02
SHCBP1-205ENST00000566016 FHITP49789 147 aa15.17■□□□□ 0.02
SHCBP1-205ENST00000566016 LENEPQ9Y5L5 61 aa15.17■□□□□ 0.02
SHCBP1-205ENST00000566016 SERTM2A0A1B0GWG4 89 aa15.16■□□□□ 0.02
SHCBP1-205ENST00000566016 ZNF138P52744 262 aa15.16■□□□□ 0.02
SHCBP1-205ENST00000566016 RRN3P1Q2M238 152 aa15.16■□□□□ 0.02
SHCBP1-205ENST00000566016 IQCF2Q8IXL9 164 aa15.16■□□□□ 0.02
SHCBP1-205ENST00000566016 GGTLC3B5MD39 225 aa15.15■□□□□ 0.02
SHCBP1-205ENST00000566016 H7BYZ3 331 aa15.15■□□□□ 0.02
SHCBP1-205ENST00000566016 RAB5CP51148 216 aa15.15■□□□□ 0.02
SHCBP1-205ENST00000566016 KIR3DS1Q14943 382 aa15.15■□□□□ 0.02
SHCBP1-205ENST00000566016 C11orf45Q8TAV5 145 aa15.15■□□□□ 0.02
SHCBP1-205ENST00000566016 MBD3L1Q8WWY6 194 aa15.15■□□□□ 0.02
SHCBP1-205ENST00000566016 FGF8P55075 233 aaPredicted RBP15.14■□□□□ 0.01
SHCBP1-205ENST00000566016 TAS2R60P59551 318 aa15.14■□□□□ 0.01
SHCBP1-205ENST00000566016 ZFAND2AQ8N6M9 145 aa15.14■□□□□ 0.01
SHCBP1-205ENST00000566016 FAM213BQ8TBF2 198 aa15.14■□□□□ 0.01
SHCBP1-205ENST00000566016 NKX6-2Q9C056 277 aaPredicted RBP15.14■□□□□ 0.01
SHCBP1-205ENST00000566016 ARL2-SNX15V9GYD0 113 aa15.14■□□□□ 0.01
SHCBP1-205ENST00000566016 STARD9Q9P2P6 4700 aa15.14■□□□□ 0.01
SHCBP1-205ENST00000566016 LOC102723971A0A1B0GUV8 181 aa15.14■□□□□ 0.01
SHCBP1-205ENST00000566016 TMPRSS5Q9H3S3 457 aa15.14■□□□□ 0.01
SHCBP1-205ENST00000566016 TEX48A0A1B0GUV7 120 aa15.13■□□□□ 0.01
SHCBP1-205ENST00000566016 C7orf71A4D174 169 aa15.13■□□□□ 0.01
SHCBP1-205ENST00000566016 SUMO1P63165 101 aaKnown RBP15.13■□□□□ 0.01
SHCBP1-205ENST00000566016 GOLT1AQ6ZVE7 132 aa15.13■□□□□ 0.01
SHCBP1-205ENST00000566016 Q8TAT8 98 aa15.13■□□□□ 0.01
SHCBP1-205ENST00000566016 TCRAP04437 139 aa15.12■□□□□ 0.01
SHCBP1-205ENST00000566016 ZFAND6Q6FIF0 208 aa15.12■□□□□ 0.01
SHCBP1-205ENST00000566016 LINC01587Q99440 93 aa15.12■□□□□ 0.01
SHCBP1-205ENST00000566016 NIPSNAP3BQ9BS92 247 aa15.12■□□□□ 0.01
SHCBP1-205ENST00000566016 RPH3ALQ9UNE2 315 aa15.12■□□□□ 0.01
SHCBP1-205ENST00000566016 YTHDF2Q9Y5A9 579 aaKnown RBP15.12■□□□□ 0.01
SHCBP1-205ENST00000566016 FAM74A7A6NL05 159 aa15.11■□□□□ 0.01
SHCBP1-205ENST00000566016 K7EQM0 130 aa15.11■□□□□ 0.01
SHCBP1-205ENST00000566016 GPX1P07203 203 aa15.11■□□□□ 0.01
SHCBP1-205ENST00000566016 GNG5P63218 68 aa15.11■□□□□ 0.01
SHCBP1-205ENST00000566016 SFT2D1Q8WV19 159 aa15.11■□□□□ 0.01
SHCBP1-205ENST00000566016 PYGO2Q9BRQ0 406 aa15.11■□□□□ 0.01
SHCBP1-205ENST00000566016 EPDR1Q9UM22 224 aa15.11■□□□□ 0.01
SHCBP1-205ENST00000566016 TRAV12-3A0A0B4J271 114 aa15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 CXorf65A6NEN9 183 aa15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 NUPR2A6NF83 97 aa15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 FBLL1A6NHQ2 334 aaKnown RBP15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 ZNF705GA8MUZ8 300 aaPredicted RBP15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 J3KRW8 73 aa15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 H2AFB1P0C5Y9 115 aa15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 SULT1A2P50226 295 aa15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 TCEAL7Q9BRU2 100 aa15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 ATG101Q9BSB4 218 aa15.1■□□□□ 0.01
SHCBP1-205ENST00000566016 ZNF324O75467 553 aaPredicted RBP15.09■□□□□ 0.01
SHCBP1-205ENST00000566016 NANOS2P60321 138 aaKnown RBP15.09■□□□□ 0.01
SHCBP1-205ENST00000566016 ZNF493Q6ZR52 646 aa15.09■□□□□ 0.01
SHCBP1-205ENST00000566016 CYB561D1Q8N8Q1 229 aa15.09■□□□□ 0.01
SHCBP1-205ENST00000566016 TMEM263Q8WUH6 116 aaKnown RBP15.09■□□□□ 0.01
SHCBP1-205ENST00000566016 C16orf74Q96GX8 76 aa15.09■□□□□ 0.01
SHCBP1-205ENST00000566016 LINC00467Q9BRT7 94 aa15.09■□□□□ 0.01
SHCBP1-205ENST00000566016 CELA1Q9UNI1 258 aa15.09■□□□□ 0.01
SHCBP1-205ENST00000566016 TRAV1-1A0A0B4J248 108 aa15.08■□□□□ 0.01
SHCBP1-205ENST00000566016 SPART-AS1P0CW21 52 aa15.08■□□□□ 0.01
SHCBP1-205ENST00000566016 UBE2G2P60604 165 aa15.08■□□□□ 0.01
SHCBP1-205ENST00000566016 BTN1A1Q13410 526 aa15.08■□□□□ 0.01
SHCBP1-205ENST00000566016 PMS2P11Q13670 270 aa15.08■□□□□ 0.01
SHCBP1-205ENST00000566016 PRR9Q5T870 116 aa15.08■□□□□ 0.01
SHCBP1-205ENST00000566016 RNASE8Q8TDE3 154 aaKnown RBP15.08■□□□□ 0.01
SHCBP1-205ENST00000566016 DKK2Q9UBU2 259 aa15.08■□□□□ 0.01
SHCBP1-205ENST00000566016 TRAV8-1A0A0A6YYK1 113 aa15.08■□□□□ 0
SHCBP1-205ENST00000566016 RNASE4P34096 147 aaKnown RBP15.08■□□□□ 0
SHCBP1-205ENST00000566016 PPT1P50897 306 aa15.08■□□□□ 0
SHCBP1-205ENST00000566016 TMEM75Q8N9X5 138 aa15.08■□□□□ 0
SHCBP1-205ENST00000566016 PLAC8L1A1L4L8 177 aa15.07■□□□□ 0
SHCBP1-205ENST00000566016 C11orf94C9JXX5 98 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms