RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 RNF24Q9Y225 148 aa4.71□□□□□ -1.65
CHD9-217ENST00000565832 LY96Q9Y6Y9 160 aa4.71□□□□□ -1.65
CHD9-217ENST00000565832 FBN1P35555 2871 aaKnown RBP4.71□□□□□ -1.66
CHD9-217ENST00000565832 C1orf196B1AJZ1 125 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 PHOX2AO14813 284 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 ELANEP08246 267 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 FOLR2P14207 255 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 S100PP25815 95 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 HOXD3P31249 432 aaPredicted RBP4.71□□□□□ -1.66
CHD9-217ENST00000565832 SSTP61278 116 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 SNRPEP62304 92 aaKnown RBP4.71□□□□□ -1.66
CHD9-217ENST00000565832 RPL19P84098 196 aaKnown RBP4.71□□□□□ -1.66
CHD9-217ENST00000565832 PSG9Q00887 426 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 FLI1Q01543 452 aaPredicted RBP4.71□□□□□ -1.66
CHD9-217ENST00000565832 FOXL1Q12952 345 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 GAGE13Q4V321 117 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 C1orf194Q5T5A4 169 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 TCF24Q7RTU0 167 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 S100A7AQ86SG5 101 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 Q86TA4 180 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 MYOZ3Q8TDC0 251 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 FRZBQ92765 325 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 UBE2E2Q96LR5 201 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 ATP6V0BQ99437 205 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 PYGO2Q9BRQ0 406 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 DAZ1Q9NQZ3 744 aaKnown RBP4.71□□□□□ -1.66
CHD9-217ENST00000565832 PRELID1Q9Y255 219 aa4.71□□□□□ -1.66
CHD9-217ENST00000565832 PKD1L1Q8TDX9 2849 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 IGHV7-4-1A0A0J9YVY3 117 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 TMEM213A2RRL7 107 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 C9orf118A6NHY6 69 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 F6UB75 175 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 CD28P10747 220 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 TFPI2P48307 235 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 ZNF80P51504 273 aaPredicted RBP4.7□□□□□ -1.66
CHD9-217ENST00000565832 FAM106AQ4KMX7 169 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 FAM209BQ5JX69 171 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 TMEM183AQ8IXX5 376 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 OR11H1Q8NG94 326 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 LINC01006Q8NI28 216 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 IMMP2LQ96T52 175 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 SAV1Q9H4B6 383 aaPredicted RBP4.7□□□□□ -1.66
CHD9-217ENST00000565832 OSTCQ9NRP0 149 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 IL36BQ9NZH7 164 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 SMPXQ9UHP9 88 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 STAB1Q9NY15 2570 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 NBEAL2Q6ZNJ1 2754 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 CYSRT1A8MQ03 144 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 PPP1R2P9O14990 202 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST1H2BKO60814 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST1H2BJP06899 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 LGALS1P09382 135 aaKnown RBP4.7□□□□□ -1.66
CHD9-217ENST00000565832 TRGC1P0CF51 173 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 CBLN1P23435 193 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST1H2BOP23527 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST1H2BBP33778 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 CSN1S1P47710 185 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST1H2BDP58876 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 LINC00310P59036 64 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST1H2BCP62807 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 FABP9Q0Z7S8 132 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST2H2BEQ16778 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.7□□□□□ -1.66
CHD9-217ENST00000565832 GFI1BQ5VTD9 330 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 ADAMTSL5Q6ZMM2 481 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 TMEM86BQ8N661 226 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 RNF152Q8N8N0 203 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 GTSF1Q8WW33 167 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST1H2BHQ93079 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST1H2BNQ99877 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 HIST1H2BMQ99879 126 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 TCEAL7Q9BRU2 100 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 AGPAT4-IT1Q9H0P7 198 aa4.7□□□□□ -1.66
CHD9-217ENST00000565832 A0A087X0K7 114 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 TMSB15BA0A087X1C1 80 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 MUC21A0A0G2JKD1 596 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 MUC21A0A140T8X8 626 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 TMEM89A2RUT3 159 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 C19orf71A6NCJ1 209 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 J3KRW8 73 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 GATCO43716 136 aaKnown RBP4.69□□□□□ -1.66
CHD9-217ENST00000565832 MUC21Q5SSG8 566 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 MRPL54Q6P161 138 aaKnown RBP4.69□□□□□ -1.66
CHD9-217ENST00000565832 KCNIP4Q6PIL6 250 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 ZNF575Q86XF7 245 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 TMEM75Q8N9X5 138 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 KLHL30-AS1Q8NEE0 82 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 PRR25Q96S07 402 aa4.69□□□□□ -1.66
CHD9-217ENST00000565832 CITED2Q99967 270 aaPredicted RBP4.69□□□□□ -1.66
CHD9-217ENST00000565832 SMIM27A0A1W2PRY6 76 aa4.68□□□□□ -1.66
CHD9-217ENST00000565832 HIGD1CA8MV81 97 aa4.68□□□□□ -1.66
CHD9-217ENST00000565832 SOCS3O14543 225 aa4.68□□□□□ -1.66
CHD9-217ENST00000565832 P01737 135 aa4.68□□□□□ -1.66
CHD9-217ENST00000565832 CDX1P47902 265 aaPredicted RBP4.68□□□□□ -1.66
CHD9-217ENST00000565832 NDUFA6P56556 154 aa4.68□□□□□ -1.66
CHD9-217ENST00000565832 HILS1P60008 231 aa4.68□□□□□ -1.66
CHD9-217ENST00000565832 RAB5BP61020 215 aa4.68□□□□□ -1.66
CHD9-217ENST00000565832 KLF5Q13887 457 aaPredicted RBP4.68□□□□□ -1.66
CHD9-217ENST00000565832 TEX29Q8N6K0 151 aa4.68□□□□□ -1.66
CHD9-217ENST00000565832 NUP35Q8NFH5 326 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms