RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 C9orf47Q6ZRZ4 202 aa10.92□□□□□ -0.66
CDH3-204ENST00000565453 LINC00467Q9BRT7 94 aa10.92□□□□□ -0.66
CDH3-204ENST00000565453 LINC00588Q9Y4M8 146 aa10.92□□□□□ -0.66
CDH3-204ENST00000565453 PKD1P98161 4303 aa10.92□□□□□ -0.66
CDH3-204ENST00000565453 DNAH11Q96DT5 4516 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 GAGE12BA1L429 117 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 SNURFLB1AK76 121 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 GAGE7O76087 117 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 GAGE12FP0CL80 117 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 GAGE12GP0CL81 117 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 GAGE12IP0CL82 117 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 CRISP2P16562 243 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 HOXA5P20719 270 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 CD300CQ08708 224 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 ICAM4Q14773 271 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 PPP1R1CQ8WVI7 109 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 MRPL32Q9BYC8 188 aaKnown RBP10.91□□□□□ -0.66
CDH3-204ENST00000565453 OR51M1Q9H341 326 aa10.91□□□□□ -0.66
CDH3-204ENST00000565453 DYNC1H1Q14204 4646 aaKnown RBP10.9□□□□□ -0.66
CDH3-204ENST00000565453 IGKV2-40A0A087WW87 121 aaPredicted RBP10.9□□□□□ -0.66
CDH3-204ENST00000565453 NBDYA0A0U1RRE5 68 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 IGKV2D-40P01614 121 aaPredicted RBP10.9□□□□□ -0.66
CDH3-204ENST00000565453 NBEAP1P0C6P0 100 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 CCL18P55774 89 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 BTN1A1Q13410 526 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 SOHLH1Q5JUK2 328 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 ZFAND2AQ8N6M9 145 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 FXYD5Q96DB9 178 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 KCNIP2Q9NS61 270 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 PKHD1P08F94 4074 aa10.9□□□□□ -0.66
CDH3-204ENST00000565453 TRAV26-1A0A087WT03 109 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 M6PRP20645 277 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 OR5I1Q13606 314 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 ANXA2RQ3ZCQ2 193 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 PRR9Q5T870 116 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 Q6ZTI0 123 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 RXFP4Q8TDU9 374 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 GNPNAT1Q96EK6 184 aaPredicted RBP10.89□□□□□ -0.67
CDH3-204ENST00000565453 ZNF503Q96F45 646 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 ATP5SQ99766 215 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 VGLL1Q99990 258 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 PAXXQ9BUH6 204 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 GSN-AS1Q9NRJ2 163 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 FUT9Q9Y231 359 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 HSPB11Q9Y547 144 aa10.89□□□□□ -0.67
CDH3-204ENST00000565453 MPC2O95563 127 aa10.88□□□□□ -0.67
CDH3-204ENST00000565453 NMBP08949 121 aa10.88□□□□□ -0.67
CDH3-204ENST00000565453 FAM122CQ6P4D5 195 aa10.88□□□□□ -0.67
CDH3-204ENST00000565453 SSX7Q7RTT5 188 aa10.88□□□□□ -0.67
CDH3-204ENST00000565453 EIF4E3Q8N5X7 224 aaKnown RBP10.88□□□□□ -0.67
CDH3-204ENST00000565453 ZNF680Q8NEM1 530 aa10.88□□□□□ -0.67
CDH3-204ENST00000565453 PHYHIPLQ96FC7 376 aa10.88□□□□□ -0.67
CDH3-204ENST00000565453 C18orf15Q96N68 181 aa10.88□□□□□ -0.67
CDH3-204ENST00000565453 TMPRSS5Q9H3S3 457 aa10.88□□□□□ -0.67
CDH3-204ENST00000565453 ZNF492Q9P255 531 aa10.88□□□□□ -0.67
CDH3-204ENST00000565453 A0A0J9YY99 117 aa10.87□□□□□ -0.67
CDH3-204ENST00000565453 C17orf112F2Z3M2 114 aa10.87□□□□□ -0.67
CDH3-204ENST00000565453 H3BNG1 76 aa10.87□□□□□ -0.67
CDH3-204ENST00000565453 OR10J4P0C629 311 aa10.87□□□□□ -0.67
CDH3-204ENST00000565453 RNASE4P34096 147 aaKnown RBP10.87□□□□□ -0.67
CDH3-204ENST00000565453 Q6ZQT7 251 aa10.87□□□□□ -0.67
CDH3-204ENST00000565453 SSNA1O43805 119 aa10.86□□□□□ -0.67
CDH3-204ENST00000565453 GPX1P07203 203 aa10.86□□□□□ -0.67
CDH3-204ENST00000565453 MED14OSP0DP75 135 aa10.86□□□□□ -0.67
CDH3-204ENST00000565453 TCL1AP56279 114 aa10.86□□□□□ -0.67
CDH3-204ENST00000565453 TMEM78Q5T7P6 136 aa10.86□□□□□ -0.67
CDH3-204ENST00000565453 KLF12Q9Y4X4 402 aa10.86□□□□□ -0.67
CDH3-204ENST00000565453 TRBV7-9A0A0J9YWB2 115 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 SPINK4O60575 86 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 RPL12P30050 165 aaKnown RBP10.85□□□□□ -0.67
CDH3-204ENST00000565453 DEFA1P59665 94 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 DEFA3P59666 94 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 TNP2Q05952 138 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 ESRGQ1W209 222 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 FFAR4Q5NUL3 377 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
CDH3-204ENST00000565453 C6orf223Q8N319 242 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 VSIG2Q96IQ7 327 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 WFDC1Q9HC57 220 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 MBD2Q9UBB5 411 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 TP53TG3Q9ULZ0 132 aa10.85□□□□□ -0.67
CDH3-204ENST00000565453 TRGV1A0A0A0MS02 117 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 OR7C2O60412 319 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 PET100P0DJ07 73 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 ZNF138P52744 262 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 ZNF575Q86XF7 245 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 Q8TAT8 98 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 UPK3BQ9BT76 320 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 SMIM3Q9BZL3 60 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 Q9H3A6 140 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 Q9H8V8 135 aa10.84□□□□□ -0.67
CDH3-204ENST00000565453 TRGV2A0A075B6R0 118 aa10.83□□□□□ -0.68
CDH3-204ENST00000565453 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
CDH3-204ENST00000565453 IFNA5P01569 189 aa10.83□□□□□ -0.68
CDH3-204ENST00000565453 RANP62826 216 aaKnown RBP10.83□□□□□ -0.68
CDH3-204ENST00000565453 UBE2L3P68036 154 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms