RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 NPCDR1Q9BY65 106 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 AGRNO00468 2067 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 IGKV2-40A0A087WW87 121 aaPredicted RBP4.47□□□□□ -1.69
TCF4-228ENST00000565393 TRGV1A0A0A0MS02 117 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 SSNA1O43805 119 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 ZNF324O75467 553 aaPredicted RBP4.47□□□□□ -1.69
TCF4-228ENST00000565393 UPK1BO75841 260 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 IGKV2D-40P01614 121 aaPredicted RBP4.47□□□□□ -1.69
TCF4-228ENST00000565393 HOXA5P20719 270 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 RANP62826 216 aaKnown RBP4.47□□□□□ -1.69
TCF4-228ENST00000565393 TNP2Q05952 138 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 BTN1A1Q13410 526 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 PDE6HQ13956 83 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 ESRGQ1W209 222 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 Q6ZTI0 123 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 EIF4E3Q8N5X7 224 aaKnown RBP4.47□□□□□ -1.69
TCF4-228ENST00000565393 ZNF680Q8NEM1 530 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 ODF3Q96PU9 254 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 VGLL1Q99990 258 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 PAXXQ9BUH6 204 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 NMES1Q9C002 83 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 WDR61Q9GZS3 305 aaKnown RBP4.47□□□□□ -1.69
TCF4-228ENST00000565393 OR5AC2Q9NZP5 309 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 KLF12Q9Y4X4 402 aa4.47□□□□□ -1.69
TCF4-228ENST00000565393 STARD9Q9P2P6 4700 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 C16orf90A8MZG2 172 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 H0YIZ8 118 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 H3BNG1 76 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 OR7C2O60412 319 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 PRAF2O60831 178 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 IFNA5P01569 189 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 IGHV3-53P01767 116 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 ZNF138P52744 262 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 C9orf47Q6ZRZ4 202 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 ZNF575Q86XF7 245 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 LINC00612Q8N6U2 182 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 ZNF503Q96F45 646 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 FAM167A-AS1Q96KT0 104 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 FAM19A4Q96LR4 140 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 HYLS1Q96M11 299 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 SMIM3Q9BZL3 60 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 TMPRSS5Q9H3S3 457 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 KCNIP2Q9NS61 270 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 ZNF492Q9P255 531 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 TP53TG3Q9ULZ0 132 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 FUT9Q9Y231 359 aa4.46□□□□□ -1.7
TCF4-228ENST00000565393 DYNC2H1Q8NCM8 4307 aaKnown RBP4.45□□□□□ -1.7
TCF4-228ENST00000565393 IGHV1OR15-1A0A075B7D0 117 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 KLLNB2CW77 178 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 PAX4O43316 350 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 NMBP08949 121 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 RPL12P30050 165 aaKnown RBP4.45□□□□□ -1.7
TCF4-228ENST00000565393 DEFA1P59665 94 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 DEFA3P59666 94 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 IFITM3Q01628 133 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 ANXA2RQ3ZCQ2 193 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 TTC32Q5I0X7 151 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 FFAR4Q5NUL3 377 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 Q6ZQT7 251 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 CMTM2Q8TAZ6 248 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 PPP1R1CQ8WVI7 109 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 VSIG2Q96IQ7 327 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 ATP5SQ99766 215 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 LINC00467Q9BRT7 94 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 MRPL32Q9BYC8 188 aaKnown RBP4.45□□□□□ -1.7
TCF4-228ENST00000565393 MRPL16Q9NX20 251 aaKnown RBP4.45□□□□□ -1.7
TCF4-228ENST00000565393 MBD2Q9UBB5 411 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 HHLA3Q9XRX5 114 aa4.45□□□□□ -1.7
TCF4-228ENST00000565393 A0A096LPF7 62 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 TRGV4A0A0C4DH28 118 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 A0A1W2PPV4 95 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 PGPA6NDG6 321 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 A6NHS1 94 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 SPINK4O60575 86 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 PFDN1O60925 122 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 MPC2O95563 127 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 PET100P0DJ07 73 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 CRISP2P16562 243 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 TCL1AP56279 114 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 H2BFSP57053 126 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 TAS2R45P59539 299 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 SLAQ13239 276 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 FAM74A1Q5RGS3 127 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 MUC21Q5SSG8 566 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 IBA57Q5T440 356 aaKnown RBP4.44□□□□□ -1.7
TCF4-228ENST00000565393 FAM159AQ6UWV7 190 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 LYPD1Q8N2G4 141 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 ZFAND2AQ8N6M9 145 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 C11orf72Q8NBR9 251 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 Q8TAT8 98 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 FXYD5Q96DB9 178 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 PHYHIPLQ96FC7 376 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 MARVELD1Q9BSK0 173 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 Q9H3A6 140 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 MDFICQ9P1T7 246 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 RPH3ALQ9UNE2 315 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 ICOSQ9Y6W8 199 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
TCF4-228ENST00000565393 DNAH7Q8WXX0 4024 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 DNAH1Q9P2D7 4330 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms