RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PRELID1Q9Y255 219 aa9.73□□□□□ -0.85
VPS9D1-204ENST00000565023 CDC34P49427 236 aaPredicted RBP9.72□□□□□ -0.85
VPS9D1-204ENST00000565023 DAD1P61803 113 aa9.72□□□□□ -0.85
VPS9D1-204ENST00000565023 UBE2L3P68036 154 aaKnown RBP9.72□□□□□ -0.85
VPS9D1-204ENST00000565023 PQLC2Q6ZP29 291 aa9.72□□□□□ -0.85
VPS9D1-204ENST00000565023 EXOC3-AS1Q8N2X6 119 aa9.72□□□□□ -0.85
VPS9D1-204ENST00000565023 PHYHIPLQ96FC7 376 aa9.72□□□□□ -0.85
VPS9D1-204ENST00000565023 KIAA1109Q2LD37 5005 aa9.72□□□□□ -0.85
VPS9D1-204ENST00000565023 M0R3E3 92 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 BCL2L11O43521 198 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 C1QBP02746 253 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 STAG3L2P0CL84 134 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 STAG3L3P0CL85 134 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 AZU1P20160 251 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 KIR3DS1Q14943 382 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 AKAP14Q86UN6 197 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 LYPD1Q8N2G4 141 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 OR10J6PQ8NGY7 276 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 RAB24Q969Q5 203 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 NDUFAF3Q9BU61 184 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 AAMDCQ9H7C9 122 aa9.71□□□□□ -0.86
VPS9D1-204ENST00000565023 TEX48A0A1B0GUV7 120 aa9.7□□□□□ -0.86
VPS9D1-204ENST00000565023 A0A1B0GVG6 124 aa9.7□□□□□ -0.86
VPS9D1-204ENST00000565023 KANTRA0A1W2PQU2 76 aa9.7□□□□□ -0.86
VPS9D1-204ENST00000565023 HMGB3O15347 200 aaKnown RBP9.7□□□□□ -0.86
VPS9D1-204ENST00000565023 CDKN1BP46527 198 aa9.7□□□□□ -0.86
VPS9D1-204ENST00000565023 ICAM4Q14773 271 aa9.7□□□□□ -0.86
VPS9D1-204ENST00000565023 TMUB2Q71RG4 321 aa9.7□□□□□ -0.86
VPS9D1-204ENST00000565023 ACTR3CQ9C0K3 210 aaPredicted RBP9.7□□□□□ -0.86
VPS9D1-204ENST00000565023 KMT2AQ03164 3969 aa9.7□□□□□ -0.86
VPS9D1-204ENST00000565023 NPIPB6E9PJ23 425 aa9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 ARL14EPLP0DKL9 152 aa9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 DEFB130BP0DP73 79 aa9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 DEFB130AP0DP74 79 aa9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 RANP62826 216 aaKnown RBP9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 LGALSLQ3ZCW2 172 aaPredicted RBP9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 SSX7Q7RTT5 188 aa9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 SUN5Q8TC36 379 aa9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 HYLS1Q96M11 299 aa9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 ZNF471Q9BX82 626 aaPredicted RBP9.69□□□□□ -0.86
VPS9D1-204ENST00000565023 PFDN1O60925 122 aa9.68□□□□□ -0.86
VPS9D1-204ENST00000565023 ZNF726P1Q15940 193 aa9.68□□□□□ -0.86
VPS9D1-204ENST00000565023 AKR1C8PQ5T2L2 129 aa9.68□□□□□ -0.86
VPS9D1-204ENST00000565023 ODF3Q96PU9 254 aa9.68□□□□□ -0.86
VPS9D1-204ENST00000565023 Q9H3A6 140 aa9.68□□□□□ -0.86
VPS9D1-204ENST00000565023 VPS13DQ5THJ4 4388 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 CTXND1A0A1B0GTU2 59 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 CXorf1O96002 111 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 SEC11BP0C7V7 166 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 CT45A10P0DMU9 189 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 GCHFRP30047 84 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 TSPOP30536 169 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 EIF5AP63241 154 aaKnown RBP9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 CD300CQ08708 224 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 ERCC8Q13216 396 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 GFI1BQ5VTD9 330 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 UBE2DNLQ8IWF7 75 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 DNAH10Q8IVF4 4471 aa9.67□□□□□ -0.86
VPS9D1-204ENST00000565023 TRAV12-3A0A0B4J271 114 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 TAS2R60P59551 318 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 TMEM88Q6PEY1 159 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 C9orf47Q6ZRZ4 202 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 TMEM256Q8N2U0 113 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 ARL6IP6Q8N6S5 226 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 STOML3Q8TAV4 291 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 LINC00477Q96M19 166 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 AGPAT4-IT1Q9H0P7 198 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 OTORQ9NRC9 128 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 TMEM167BQ9NRX6 74 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 HECTD4Q9Y4D8 3996 aa9.66□□□□□ -0.86
VPS9D1-204ENST00000565023 IGKV2-40A0A087WW87 121 aaPredicted RBP9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 PLAC8L1A1L4L8 177 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 PGPA6NDG6 321 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 LYRM9A8MSI8 78 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 UMAD1C9J7I0 102 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 F5H768 121 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 M0R2N4 97 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 IGKV2D-40P01614 121 aaPredicted RBP9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 P0DMU3 169 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 FAM231AP0DMU4 169 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 FAM231CP0DMU5 169 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 TPT1P13693 172 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 LEPP41159 167 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 CSN1S1P47710 185 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 RXFP4Q8TDU9 374 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 C16orf74Q96GX8 76 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 FAM19A4Q96LR4 140 aa9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-204ENST00000565023 DNAH6Q9C0G6 4158 aa9.64□□□□□ -0.87
VPS9D1-204ENST00000565023 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
VPS9D1-204ENST00000565023 H7BYZ3 331 aa9.64□□□□□ -0.87
VPS9D1-204ENST00000565023 SLC25A5P05141 298 aaKnown RBP9.64□□□□□ -0.87
VPS9D1-204ENST00000565023 FAM74A1Q5RGS3 127 aa9.64□□□□□ -0.87
VPS9D1-204ENST00000565023 POM121L12Q8N7R1 296 aa9.64□□□□□ -0.87
VPS9D1-204ENST00000565023 VGLL1Q99990 258 aa9.64□□□□□ -0.87
VPS9D1-204ENST00000565023 IGLV2-18A0A075B6J9 118 aa9.63□□□□□ -0.87
VPS9D1-204ENST00000565023 DIRC3C9JPN6 131 aa9.63□□□□□ -0.87
VPS9D1-204ENST00000565023 FHITP49789 147 aa9.63□□□□□ -0.87
VPS9D1-204ENST00000565023 ZFP69Q49AA0 526 aa9.63□□□□□ -0.87
VPS9D1-204ENST00000565023 TMEM78Q5T7P6 136 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms