RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 C8orf49Q96NF6 230 aa14.8□□□□□ -0.04
CLN6-205ENST00000564846 ASCL2Q99929 193 aa14.8□□□□□ -0.04
CLN6-205ENST00000564846 PEMTQ9UBM1 199 aa14.8□□□□□ -0.04
CLN6-205ENST00000564846 IGKV3-7A0A075B6H7 116 aa14.79□□□□□ -0.04
CLN6-205ENST00000564846 LOC105371267A0A1B0GV96 52 aa14.79□□□□□ -0.04
CLN6-205ENST00000564846 A8MWL6 223 aa14.79□□□□□ -0.04
CLN6-205ENST00000564846 CD28P10747 220 aa14.79□□□□□ -0.04
CLN6-205ENST00000564846 ERCC8Q13216 396 aa14.79□□□□□ -0.04
CLN6-205ENST00000564846 C9orf47Q6ZRZ4 202 aa14.79□□□□□ -0.04
CLN6-205ENST00000564846 Q8TAT8 98 aa14.79□□□□□ -0.04
CLN6-205ENST00000564846 CUBNO60494 3623 aa14.79□□□□□ -0.04
CLN6-205ENST00000564846 OVOL1O14753 267 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 ID1P41134 155 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 CRIP1P50238 77 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 TCL1AP56279 114 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 TMEM78Q5T7P6 136 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 DCANP1Q8TF63 244 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 AGPAT4-IT1Q9H0P7 198 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 PPP1R14DQ9NXH3 145 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 NAT8BQ9UHF3 227 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 TSSC4Q9Y5U2 329 aaPredicted RBP14.78□□□□□ -0.04
CLN6-205ENST00000564846 IZUMO1RA6ND01 250 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 ZNF138P52744 262 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 GFRA4Q9GZZ7 299 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 RNF114Q9Y508 228 aa14.78□□□□□ -0.04
CLN6-205ENST00000564846 FAM231BA6NCW3 169 aa14.77□□□□□ -0.05
CLN6-205ENST00000564846 HAX1O00165 279 aa14.77□□□□□ -0.05
CLN6-205ENST00000564846 FAM162BQ5T6X4 162 aa14.77□□□□□ -0.05
CLN6-205ENST00000564846 C11orf44Q8N8P7 122 aa14.77□□□□□ -0.05
CLN6-205ENST00000564846 OR9G4Q8NGQ1 327 aa14.77□□□□□ -0.05
CLN6-205ENST00000564846 NEU1Q99519 415 aa14.77□□□□□ -0.05
CLN6-205ENST00000564846 MS4A6AQ9H2W1 248 aa14.77□□□□□ -0.05
CLN6-205ENST00000564846 PHOX2AO14813 284 aa14.76□□□□□ -0.05
CLN6-205ENST00000564846 SMUG1Q53HV7 270 aa14.76□□□□□ -0.05
CLN6-205ENST00000564846 ACTL10Q5JWF8 245 aa14.76□□□□□ -0.05
CLN6-205ENST00000564846 OR2D3Q8NGH3 330 aa14.76□□□□□ -0.05
CLN6-205ENST00000564846 DUX3Q96PT4 197 aa14.76□□□□□ -0.05
CLN6-205ENST00000564846 CITED2Q99967 270 aaPredicted RBP14.76□□□□□ -0.05
CLN6-205ENST00000564846 GPR61Q9BZJ8 451 aa14.76□□□□□ -0.05
CLN6-205ENST00000564846 CRLF1O75462 422 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 S100A6P06703 90 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 PROK1P58294 105 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 COX19Q49B96 90 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 NUP35Q8NFH5 326 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 OR10J6PQ8NGY7 276 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 LINC00477Q96M19 166 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 LENEPQ9Y5L5 61 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 SELENOKQ9Y6D0 94 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 HIGD1CA8MV81 97 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 FHL3Q13643 280 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 FRZBQ92765 325 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 DLX4Q92988 240 aaPredicted RBP14.75□□□□□ -0.05
CLN6-205ENST00000564846 RAX2Q96IS3 184 aa14.75□□□□□ -0.05
CLN6-205ENST00000564846 SH2D1AO60880 128 aa14.74□□□□□ -0.05
CLN6-205ENST00000564846 ADAMTSL5Q6ZMM2 481 aa14.74□□□□□ -0.05
CLN6-205ENST00000564846 TRAPPC1Q9Y5R8 145 aa14.74□□□□□ -0.05
CLN6-205ENST00000564846 HIST2H2BDQ6DRA6 164 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 WDR73Q6P4I2 378 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 WFDC3Q8IUB2 231 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 NF1P21359 2839 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 A0A1W2PRX2 142 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 CCL24O00175 119 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 SPINK4O60575 86 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST1H2BKO60814 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST1H2BJP06899 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST1H2BOP23527 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST1H2BBP33778 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST1H2BDP58876 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST1H2BCP62807 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 PAFAH1B2P68402 229 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST2H2BEQ16778 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.73□□□□□ -0.05
CLN6-205ENST00000564846 RASL11AQ6T310 242 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 GTSF1Q8WW33 167 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST1H2BHQ93079 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST1H2BNQ99877 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 HIST1H2BMQ99879 126 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 GNB1LQ9BYB4 327 aa14.73□□□□□ -0.05
CLN6-205ENST00000564846 SAV1Q9H4B6 383 aaPredicted RBP14.73□□□□□ -0.05
CLN6-205ENST00000564846 K7EQG2 157 aa14.72□□□□□ -0.05
CLN6-205ENST00000564846 TRGC1P0CF51 173 aa14.72□□□□□ -0.05
CLN6-205ENST00000564846 FOXA3P55318 350 aaPredicted RBP14.72□□□□□ -0.05
CLN6-205ENST00000564846 SNRPD3P62318 126 aaKnown RBP14.72□□□□□ -0.05
CLN6-205ENST00000564846 FABP9Q0Z7S8 132 aa14.72□□□□□ -0.05
CLN6-205ENST00000564846 OR8A1Q8NGG7 326 aa14.72□□□□□ -0.05
CLN6-205ENST00000564846 HIVEP1P15822 2718 aa14.72□□□□□ -0.05
CLN6-205ENST00000564846 XKRY2A2RUG3 117 aa14.71□□□□□ -0.05
CLN6-205ENST00000564846 FABP5P3A8MUU1 101 aa14.71□□□□□ -0.05
CLN6-205ENST00000564846 MT-ND6P03923 174 aa14.71□□□□□ -0.05
CLN6-205ENST00000564846 CSN3P07498 182 aa14.71□□□□□ -0.05
CLN6-205ENST00000564846 ZNF80P51504 273 aaPredicted RBP14.71□□□□□ -0.05
CLN6-205ENST00000564846 MRPL54Q6P161 138 aaKnown RBP14.71□□□□□ -0.05
CLN6-205ENST00000564846 RBPMS2Q6ZRY4 209 aaKnown RBP14.71□□□□□ -0.05
CLN6-205ENST00000564846 ATP5L2Q7Z4Y8 100 aa14.71□□□□□ -0.05
CLN6-205ENST00000564846 TMEM189A5PLL7 270 aa14.7□□□□□ -0.06
CLN6-205ENST00000564846 ZNF705DP0CH99 300 aaPredicted RBP14.7□□□□□ -0.06
CLN6-205ENST00000564846 ZNF705BP0CI00 300 aaPredicted RBP14.7□□□□□ -0.06
CLN6-205ENST00000564846 TFPI2P48307 235 aa14.7□□□□□ -0.06
CLN6-205ENST00000564846 C5orf52A6NGY3 159 aa14.7□□□□□ -0.06
CLN6-205ENST00000564846 RPS20P60866 119 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms