RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 GBGT1Q8N5D6 347 aa10.56□□□□□ -0.72
SMPD3-205ENST00000563455 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
SMPD3-205ENST00000563455 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
SMPD3-205ENST00000563455 AURKAIP1Q9NWT8 199 aaPredicted RBP10.56□□□□□ -0.72
SMPD3-205ENST00000563455 NAT8BQ9UHF3 227 aa10.56□□□□□ -0.72
SMPD3-205ENST00000563455 TRAV2A0A0B4J234 112 aa10.55□□□□□ -0.72
SMPD3-205ENST00000563455 C19orf71A6NCJ1 209 aa10.55□□□□□ -0.72
SMPD3-205ENST00000563455 NPIPB6E9PJ23 425 aa10.55□□□□□ -0.72
SMPD3-205ENST00000563455 SNRPCP09234 159 aaKnown RBP10.55□□□□□ -0.72
SMPD3-205ENST00000563455 HOXD3P31249 432 aaPredicted RBP10.55□□□□□ -0.72
SMPD3-205ENST00000563455 RPS20P60866 119 aaKnown RBP10.55□□□□□ -0.72
SMPD3-205ENST00000563455 OR5I1Q13606 314 aa10.55□□□□□ -0.72
SMPD3-205ENST00000563455 TMEM78Q5T7P6 136 aa10.55□□□□□ -0.72
SMPD3-205ENST00000563455 C9orf47Q6ZRZ4 202 aa10.55□□□□□ -0.72
SMPD3-205ENST00000563455 RPP21Q9H633 154 aaKnown RBP10.55□□□□□ -0.72
SMPD3-205ENST00000563455 IGHV3OR16-8A0A075B7F1 116 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 A0A1B0GW15 77 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 M0R3E3 92 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 APOHP02749 345 aaPredicted RBP10.54□□□□□ -0.72
SMPD3-205ENST00000563455 CXCL1P09341 107 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 FOXA3P55318 350 aaPredicted RBP10.54□□□□□ -0.72
SMPD3-205ENST00000563455 SMUG1Q53HV7 270 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 FAM162BQ5T6X4 162 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 LCNL1Q6ZST4 164 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 OR1N2Q8NGR9 330 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 PRR25Q96S07 402 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 ASCL2Q99929 193 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 GNB1LQ9BYB4 327 aa10.54□□□□□ -0.72
SMPD3-205ENST00000563455 RNASE7Q9H1E1 156 aaKnown RBP10.54□□□□□ -0.72
SMPD3-205ENST00000563455 TSSC4Q9Y5U2 329 aaPredicted RBP10.54□□□□□ -0.72
SMPD3-205ENST00000563455 MGAM2Q2M2H8 2515 aa10.53□□□□□ -0.72
SMPD3-205ENST00000563455 IZUMO1RA6ND01 250 aa10.53□□□□□ -0.72
SMPD3-205ENST00000563455 ZNF207O43670 478 aaKnown RBP10.53□□□□□ -0.72
SMPD3-205ENST00000563455 S100A8P05109 93 aa10.53□□□□□ -0.72
SMPD3-205ENST00000563455 ZNF138P52744 262 aa10.53□□□□□ -0.72
SMPD3-205ENST00000563455 SNRPD3P62318 126 aaKnown RBP10.53□□□□□ -0.72
SMPD3-205ENST00000563455 TM4SF20Q53R12 229 aa10.53□□□□□ -0.72
SMPD3-205ENST00000563455 TCF24Q7RTU0 167 aa10.53□□□□□ -0.72
SMPD3-205ENST00000563455 OR10J6PQ8NGY7 276 aa10.53□□□□□ -0.72
SMPD3-205ENST00000563455 IGHV4OR15-8A0A075B7B6 117 aa10.52□□□□□ -0.73
SMPD3-205ENST00000563455 A0A087WW49 117 aa10.52□□□□□ -0.73
SMPD3-205ENST00000563455 TMEM213A2RRL7 107 aa10.52□□□□□ -0.73
SMPD3-205ENST00000563455 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.73
SMPD3-205ENST00000563455 CBLN1P23435 193 aa10.52□□□□□ -0.73
SMPD3-205ENST00000563455 RPL11P62913 178 aaKnown RBP10.52□□□□□ -0.73
SMPD3-205ENST00000563455 PRR27Q6MZM9 219 aa10.52□□□□□ -0.73
SMPD3-205ENST00000563455 LINC01006Q8NI28 216 aa10.52□□□□□ -0.73
SMPD3-205ENST00000563455 SIGLEC8Q9NYZ4 499 aa10.52□□□□□ -0.73
SMPD3-205ENST00000563455 TRAV8-1A0A0A6YYK1 113 aa10.51□□□□□ -0.73
SMPD3-205ENST00000563455 TRAV8-2A0A0B4J237 113 aa10.51□□□□□ -0.73
SMPD3-205ENST00000563455 IGHV3-66A0A0C4DH42 116 aa10.51□□□□□ -0.73
SMPD3-205ENST00000563455 SOCS3O14543 225 aa10.51□□□□□ -0.73
SMPD3-205ENST00000563455 SYNJ2BPP57105 145 aa10.51□□□□□ -0.73
SMPD3-205ENST00000563455 C10orf99Q6UWK7 81 aa10.51□□□□□ -0.73
SMPD3-205ENST00000563455 NHLRC2Q8NBF2 726 aa10.51□□□□□ -0.73
SMPD3-205ENST00000563455 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
SMPD3-205ENST00000563455 IGHV3OR16-13A0A075B7E8 117 aa10.5□□□□□ -0.73
SMPD3-205ENST00000563455 IGHV3-74A0A0B4J1X5 117 aa10.5□□□□□ -0.73
SMPD3-205ENST00000563455 TRAV25A0A0B4J276 109 aa10.5□□□□□ -0.73
SMPD3-205ENST00000563455 C2orf70A6NJV1 201 aa10.5□□□□□ -0.73
SMPD3-205ENST00000563455 HLA-DQA1P01909 254 aa10.5□□□□□ -0.73
SMPD3-205ENST00000563455 HIST1H1AQ02539 215 aaPredicted RBP10.5□□□□□ -0.73
SMPD3-205ENST00000563455 RBPMS2Q6ZRY4 209 aaKnown RBP10.5□□□□□ -0.73
SMPD3-205ENST00000563455 ZNF738Q8NE65 137 aa10.5□□□□□ -0.73
SMPD3-205ENST00000563455 OR9G4Q8NGQ1 327 aa10.5□□□□□ -0.73
SMPD3-205ENST00000563455 BORCS7Q96B45 105 aa10.5□□□□□ -0.73
SMPD3-205ENST00000563455 IGHV3-49A0A0A0MS15 119 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 TRGC2P03986 189 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 DEFA6Q01524 100 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 OR2D3Q8NGH3 330 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 ZC2HC1AQ96GY0 325 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 ODF3Q96PU9 254 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 RNF114Q9Y508 228 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 TRAPPC1Q9Y5R8 145 aa10.49□□□□□ -0.73
SMPD3-205ENST00000563455 IGKV2-40A0A087WW87 121 aaPredicted RBP10.48□□□□□ -0.73
SMPD3-205ENST00000563455 IGKV2D-40P01614 121 aaPredicted RBP10.48□□□□□ -0.73
SMPD3-205ENST00000563455 CMC4P56277 68 aaPredicted RBP10.48□□□□□ -0.73
SMPD3-205ENST00000563455 FHL3Q13643 280 aa10.48□□□□□ -0.73
SMPD3-205ENST00000563455 TCTEX1D4Q5JR98 221 aa10.48□□□□□ -0.73
SMPD3-205ENST00000563455 KHDC1LQ5JSQ8 128 aa10.48□□□□□ -0.73
SMPD3-205ENST00000563455 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
SMPD3-205ENST00000563455 SGK494Q96LW2 274 aa10.48□□□□□ -0.73
SMPD3-205ENST00000563455 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
SMPD3-205ENST00000563455 TMEM189A5PLL7 270 aa10.47□□□□□ -0.73
SMPD3-205ENST00000563455 HIGD1CA8MV81 97 aa10.47□□□□□ -0.73
SMPD3-205ENST00000563455 ZNF705FA8MVS1 300 aaPredicted RBP10.47□□□□□ -0.73
SMPD3-205ENST00000563455 DUSP14O95147 198 aaKnown RBP10.47□□□□□ -0.73
SMPD3-205ENST00000563455 RNF182Q8N6D2 247 aa10.47□□□□□ -0.73
SMPD3-205ENST00000563455 NUP35Q8NFH5 326 aa10.47□□□□□ -0.73
SMPD3-205ENST00000563455 OR8A1Q8NGG7 326 aa10.47□□□□□ -0.73
SMPD3-205ENST00000563455 NEU1Q99519 415 aa10.47□□□□□ -0.73
SMPD3-205ENST00000563455 CITED1Q99966 193 aa10.47□□□□□ -0.73
SMPD3-205ENST00000563455 VGLL1Q99990 258 aa10.47□□□□□ -0.73
SMPD3-205ENST00000563455 MS4A6AQ9H2W1 248 aa10.47□□□□□ -0.73
SMPD3-205ENST00000563455 LOC105371267A0A1B0GV96 52 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 C5orf52A6NGY3 159 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 F2Z2F3 143 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 K7EQG2 157 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms