RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PAPPA2Q9BXP8 1791 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 CCL5P13501 91 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 THAP8Q8NA92 274 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 TANC2Q9HCD6 1990 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 IGLV3-1P01715 115 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 BAALC-AS2P0C853 105 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 RNF5Q99942 180 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 KIAA1549LQ6ZVL6 1849 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 TRBV19A0A075B6N1 114 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 PSMB8P28062 276 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 CRIPAKQ8N1N5 446 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 ZC2HC1AQ96GY0 325 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 NACAE9PAV3 2078 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 CCL13Q99616 98 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 PCDH15Q96QU1 1955 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 ADAMTS9Q9P2N4 1935 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 KIAA1671Q9BY89 1806 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 H0YGX0 51 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 PRORYQ9H606 182 aa5.02□□□□□ -1.61
CLK3-212ENST00000563418 EML6Q6ZMW3 1958 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 CGB1A6NKQ9 187 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 CCL17Q92583 94 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 LINC00477Q96M19 166 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 IGLC6P0CF74 106 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 Q8N976 141 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 SERP1Q9Y6X1 66 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 U3KQE9 123 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 IGHV3-48P01763 117 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 ECSCRQ19T08 205 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 NDUFA12Q9UI09 145 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 RHOHQ15669 191 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 C10orf105Q8TEF2 133 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 TP73-AS1Q9UF72 201 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 IGHV3-64A0A075B6Q5 118 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 TEX49A0A1B0GTD5 131 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 K7EM74 188 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 TRPT1Q86TN4 253 aaKnown RBP5.01□□□□□ -1.61
CLK3-212ENST00000563418 DEFB123Q8N688 67 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 FAM168AQ92567 244 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 DYSFO75923 2080 aa5.01□□□□□ -1.61
CLK3-212ENST00000563418 LTBP1Q14766 1721 aa5□□□□□ -1.61
CLK3-212ENST00000563418 JMJD7-PLA2G4BH0Y9G9 81 aa5□□□□□ -1.61
CLK3-212ENST00000563418 TGFBR3LH3BV60 316 aa5□□□□□ -1.61
CLK3-212ENST00000563418 RNASE4P34096 147 aaKnown RBP5□□□□□ -1.61
CLK3-212ENST00000563418 TMEM133Q9H2Q1 129 aa5□□□□□ -1.61
CLK3-212ENST00000563418 ORMDL1Q9P0S3 153 aa5□□□□□ -1.61
CLK3-212ENST00000563418 IGKV2-40A0A087WW87 121 aaPredicted RBP5□□□□□ -1.61
CLK3-212ENST00000563418 IGKV2D-40P01614 121 aaPredicted RBP5□□□□□ -1.61
CLK3-212ENST00000563418 SLC25A29Q8N8R3 303 aa5□□□□□ -1.61
CLK3-212ENST00000563418 C9orf139Q6ZV77 190 aa5□□□□□ -1.61
CLK3-212ENST00000563418 C11orf86A6NJI1 115 aa5□□□□□ -1.61
CLK3-212ENST00000563418 CD24P25063 80 aa5□□□□□ -1.61
CLK3-212ENST00000563418 RPL18AQ02543 176 aaKnown RBP5□□□□□ -1.61
CLK3-212ENST00000563418 LEAP2Q969E1 77 aa5□□□□□ -1.61
CLK3-212ENST00000563418 EXPH5Q8NEV8 1989 aa5□□□□□ -1.61
CLK3-212ENST00000563418 RBAKDNA6NC62 111 aa5□□□□□ -1.61
CLK3-212ENST00000563418 DDB2Q92466 427 aa5□□□□□ -1.61
CLK3-212ENST00000563418 PRR25Q96S07 402 aa5□□□□□ -1.61
CLK3-212ENST00000563418 NDUFA4L2Q9NRX3 87 aa5□□□□□ -1.61
CLK3-212ENST00000563418 CRLF1O75462 422 aa5□□□□□ -1.61
CLK3-212ENST00000563418 PFN2P35080 140 aa5□□□□□ -1.61
CLK3-212ENST00000563418 FAM120AOSQ5T036 256 aa5□□□□□ -1.61
CLK3-212ENST00000563418 C20orf204Q6ZNR8 217 aa5□□□□□ -1.61
CLK3-212ENST00000563418 RNF144BQ7Z419 303 aa5□□□□□ -1.61
CLK3-212ENST00000563418 C3orf56Q8N813 242 aa5□□□□□ -1.61
CLK3-212ENST00000563418 ZNF581Q9P0T4 197 aa5□□□□□ -1.61
CLK3-212ENST00000563418 PI4KAP42356 2102 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 ATG2AQ2TAZ0 1938 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 TRAV17A0A0B4J275 112 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 RNF138Q8WVD3 245 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 RNF186Q9NXI6 227 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 ZNF318Q5VUA4 2279 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 ASXL3Q9C0F0 2248 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 TRAV3A0A0B4J244 114 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 MYOD1P15172 320 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 DTX1Q86Y01 620 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 TOMM6Q96B49 74 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 THADAQ6YHU6 1953 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 M0R1W7 72 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 FANCD2OSQ96PS1 177 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 SDHAF1A6NFY7 115 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 I3L3M4 83 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 TMEM200BQ69YZ2 307 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 DSCR8Q96T75 97 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 TRAV41A0A0B4J266 112 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 CELA2AP08217 269 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 ZNF503Q96F45 646 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 PRSS22Q9GZN4 317 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 Q6ZSR3 168 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 PRIMA1Q86XR5 153 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 ZNRF1Q8ND25 227 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 TINCRA0A1B0GVN0 87 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 PRR31Q5SQ13 230 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 FLVCR1-AS1Q8TAF5 88 aa4.99□□□□□ -1.61
CLK3-212ENST00000563418 ICE1Q9Y2F5 2266 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 TRBV30A0A0K0K1B3 111 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 PF4P02776 101 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 PDE6GP18545 87 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 SPINK2P20155 84 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms