RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 IGLV2-11P01706 119 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 RAB5AP20339 215 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 SYNJ2BPP57105 145 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 PAFAH1B2P68402 229 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 TCF24Q7RTU0 167 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 PRNTQ86SH4 94 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 OR4B1Q8NGF8 309 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 AURKAIP1Q9NWT8 199 aaPredicted RBP7.36□□□□□ -1.23
UBFD1-202ENST00000563366 IL36BQ9NZH7 164 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 LENEPQ9Y5L5 61 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 URGCP-MRPS24S4R325 110 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 BAHCC1Q9P281 2608 aa7.36□□□□□ -1.23
UBFD1-202ENST00000563366 C2orf70A6NJV1 201 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 ZNF705GA8MUZ8 300 aaPredicted RBP7.35□□□□□ -1.23
UBFD1-202ENST00000563366 OVOL1O14753 267 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
UBFD1-202ENST00000563366 PFN1P07737 140 aaKnown RBP7.35□□□□□ -1.23
UBFD1-202ENST00000563366 CBLN1P23435 193 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 TCTEX1D4Q5JR98 221 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 TMEM78Q5T7P6 136 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 PRR27Q6MZM9 219 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 COX8CQ7Z4L0 72 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 GBGT1Q8N5D6 347 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 OR9G4Q8NGQ1 327 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 FAM210BQ96KR6 192 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 YPEL4Q96NS1 127 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 PPP1R14DQ9NXH3 145 aa7.35□□□□□ -1.23
UBFD1-202ENST00000563366 NSD1Q96L73 2696 aaPredicted RBP7.35□□□□□ -1.23
UBFD1-202ENST00000563366 IGKV2-40A0A087WW87 121 aaPredicted RBP7.34□□□□□ -1.23
UBFD1-202ENST00000563366 TRAV8-1A0A0A6YYK1 113 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 TRAV2A0A0B4J234 112 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 A0A1W2PPQ1 181 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 FAM231BA6NCW3 169 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 C1orf196B1AJZ1 125 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 SOCS3O14543 225 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 IGKV2D-40P01614 121 aaPredicted RBP7.34□□□□□ -1.23
UBFD1-202ENST00000563366 P01737 135 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 PROK1P58294 105 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 FAM3BP58499 235 aaPredicted RBP7.34□□□□□ -1.23
UBFD1-202ENST00000563366 RAB5BP61020 215 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 SNRPD3P62318 126 aaKnown RBP7.34□□□□□ -1.23
UBFD1-202ENST00000563366 OR5I1Q13606 314 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 FHL3Q13643 280 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 COX19Q49B96 90 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 Q71RC1 249 aaPredicted RBP7.34□□□□□ -1.23
UBFD1-202ENST00000563366 NHLRC2Q8NBF2 726 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 ZNF738Q8NE65 137 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 OR10J6PQ8NGY7 276 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 PYGO2Q9BRQ0 406 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 V9GYV3 84 aa7.34□□□□□ -1.23
UBFD1-202ENST00000563366 ANK3Q12955 4377 aaKnown RBP7.33□□□□□ -1.24
UBFD1-202ENST00000563366 MTORP42345 2549 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 TRAV8-2A0A0B4J237 113 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 TRBV7-9A0A0J9YWB2 115 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 XKRY2A2RUG3 117 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 C19orf71A6NCJ1 209 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 A8MWL6 223 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 TYMSP04818 313 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 CD28P10747 220 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 ZNF138P52744 262 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 SLURP1P55000 103 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 DEFB136Q30KP8 78 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 SMUG1Q53HV7 270 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 C9orf47Q6ZRZ4 202 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 RNF182Q8N6D2 247 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 SGK494Q96LW2 274 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 LINC00477Q96M19 166 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 PRR25Q96S07 402 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 GFRA4Q9GZZ7 299 aa7.33□□□□□ -1.24
UBFD1-202ENST00000563366 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
UBFD1-202ENST00000563366 SAV1Q9H4B6 383 aaPredicted RBP7.33□□□□□ -1.24
UBFD1-202ENST00000563366 RPP21Q9H633 154 aaKnown RBP7.33□□□□□ -1.24
UBFD1-202ENST00000563366 CCL24O00175 119 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 RPS10P46783 165 aaKnown RBP7.32□□□□□ -1.24
UBFD1-202ENST00000563366 ZNF124Q15973 351 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 FAM162BQ5T6X4 162 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 Q6AWC8 147 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 RBPMS2Q6ZRY4 209 aaKnown RBP7.32□□□□□ -1.24
UBFD1-202ENST00000563366 NDUFA11Q86Y39 141 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 DYNLRB2Q8TF09 96 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 DCANP1Q8TF63 244 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 TSKUQ8WUA8 353 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 CITED2Q99967 270 aaPredicted RBP7.32□□□□□ -1.24
UBFD1-202ENST00000563366 MS4A6AQ9H2W1 248 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 SRD5A3Q9H8P0 318 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 SIGLEC8Q9NYZ4 499 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 NAT8BQ9UHF3 227 aa7.32□□□□□ -1.24
UBFD1-202ENST00000563366 TGIF2-C20orf24A0A0A6YYL0 155 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 TRAV25A0A0B4J276 109 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 SMIM27A0A1W2PRY6 76 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 ZNF705FA8MVS1 300 aaPredicted RBP7.31□□□□□ -1.24
UBFD1-202ENST00000563366 MT-ND6P03923 174 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 CXCL1P09341 107 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 HLA-DMBP28068 263 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 RPS20P60866 119 aaKnown RBP7.31□□□□□ -1.24
UBFD1-202ENST00000563366 IGFL4Q6B9Z1 124 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 RASL11AQ6T310 242 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 ZC2HC1AQ96GY0 325 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 ASCL2Q99929 193 aa7.31□□□□□ -1.24
UBFD1-202ENST00000563366 HIVEP1P15822 2718 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms