RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 Q6ZWC4 215 aa13.79□□□□□ -0.2
RAB40C-207ENST00000563109 ODF3Q96PU9 254 aa13.79□□□□□ -0.2
RAB40C-207ENST00000563109 ATG101Q9BSB4 218 aa13.79□□□□□ -0.2
RAB40C-207ENST00000563109 F6UZH7 168 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 TAGLN2P37802 199 aaKnown RBP13.78□□□□□ -0.2
RAB40C-207ENST00000563109 LEPP41159 167 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 ATP5G3P48201 142 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 SPINK13Q1W4C9 94 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 DEFB135Q30KP9 77 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 CYB561D1Q8N8Q1 229 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 RCHY1Q96PM5 261 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 VGLL1Q99990 258 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 TM2D3Q9BRN9 247 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 AGPAT4-IT1Q9H0P7 198 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 XCL2Q9UBD3 114 aa13.78□□□□□ -0.2
RAB40C-207ENST00000563109 C11orf94C9JXX5 98 aa13.77□□□□□ -0.21
RAB40C-207ENST00000563109 M0R2Z0 102 aa13.77□□□□□ -0.21
RAB40C-207ENST00000563109 PEX7O00628 323 aa13.77□□□□□ -0.21
RAB40C-207ENST00000563109 CT45A10P0DMU9 189 aa13.77□□□□□ -0.21
RAB40C-207ENST00000563109 ZNF138P52744 262 aa13.77□□□□□ -0.21
RAB40C-207ENST00000563109 HIST1H2BAQ96A08 127 aa13.77□□□□□ -0.21
RAB40C-207ENST00000563109 INSP01308 110 aa13.76□□□□□ -0.21
RAB40C-207ENST00000563109 CDKN1BP46527 198 aa13.76□□□□□ -0.21
RAB40C-207ENST00000563109 PMS2P11Q13670 270 aa13.76□□□□□ -0.21
RAB40C-207ENST00000563109 TXNDC17Q9BRA2 123 aa13.76□□□□□ -0.21
RAB40C-207ENST00000563109 TP53TG1Q9Y2A0 90 aa13.76□□□□□ -0.21
RAB40C-207ENST00000563109 FBLL1A6NHQ2 334 aaKnown RBP13.75□□□□□ -0.21
RAB40C-207ENST00000563109 SPRY2O43597 315 aa13.75□□□□□ -0.21
RAB40C-207ENST00000563109 GIG44P09565 113 aaPredicted RBP13.75□□□□□ -0.21
RAB40C-207ENST00000563109 BCL2P10415 239 aa13.75□□□□□ -0.21
RAB40C-207ENST00000563109 CCDC28AQ8IWP9 274 aa13.75□□□□□ -0.21
RAB40C-207ENST00000563109 TMEM75Q8N9X5 138 aa13.75□□□□□ -0.21
RAB40C-207ENST00000563109 LYPD6BQ8NI32 183 aa13.75□□□□□ -0.21
RAB40C-207ENST00000563109 Q8TAT8 98 aa13.75□□□□□ -0.21
RAB40C-207ENST00000563109 NDFIP1Q9BT67 221 aa13.75□□□□□ -0.21
RAB40C-207ENST00000563109 RETNQ9HD89 108 aa13.75□□□□□ -0.21
RAB40C-207ENST00000563109 ZNF492Q9P255 531 aa13.75□□□□□ -0.21
RAB40C-207ENST00000563109 RAB14P61106 215 aa13.74□□□□□ -0.21
RAB40C-207ENST00000563109 ZNF767PQ75MW2 155 aa13.74□□□□□ -0.21
RAB40C-207ENST00000563109 RNF183Q96D59 192 aa13.74□□□□□ -0.21
RAB40C-207ENST00000563109 IGF2BP2-AS1Q96M15 143 aa13.74□□□□□ -0.21
RAB40C-207ENST00000563109 VAX2Q9UIW0 290 aa13.74□□□□□ -0.21
RAB40C-207ENST00000563109 GOLT1BQ9Y3E0 138 aa13.74□□□□□ -0.21
RAB40C-207ENST00000563109 LENEPQ9Y5L5 61 aa13.74□□□□□ -0.21
RAB40C-207ENST00000563109 TRAV8-1A0A0A6YYK1 113 aa13.73□□□□□ -0.21
RAB40C-207ENST00000563109 TRBV7-9A0A0J9YWB2 115 aa13.73□□□□□ -0.21
RAB40C-207ENST00000563109 AKR1C3P42330 323 aa13.73□□□□□ -0.21
RAB40C-207ENST00000563109 MEF2BQ02080 365 aaPredicted RBP13.73□□□□□ -0.21
RAB40C-207ENST00000563109 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
RAB40C-207ENST00000563109 J3KRW8 73 aa13.72□□□□□ -0.21
RAB40C-207ENST00000563109 NMBP08949 121 aa13.72□□□□□ -0.21
RAB40C-207ENST00000563109 UBE2G1P62253 170 aa13.72□□□□□ -0.21
RAB40C-207ENST00000563109 FLI1Q01543 452 aaPredicted RBP13.72□□□□□ -0.21
RAB40C-207ENST00000563109 PCNPQ8WW12 178 aaKnown RBP13.72□□□□□ -0.21
RAB40C-207ENST00000563109 FAM19A4Q96LR4 140 aa13.72□□□□□ -0.21
RAB40C-207ENST00000563109 OVOL2Q9BRP0 275 aa13.72□□□□□ -0.21
RAB40C-207ENST00000563109 TMEM208Q9BTX3 173 aa13.72□□□□□ -0.21
RAB40C-207ENST00000563109 PSG8Q9UQ74 426 aa13.72□□□□□ -0.21
RAB40C-207ENST00000563109 LOC102723971A0A1B0GUV8 181 aa13.71□□□□□ -0.21
RAB40C-207ENST00000563109 SCO2A0A1W2PP80 73 aa13.71□□□□□ -0.21
RAB40C-207ENST00000563109 PDE6DO43924 150 aa13.71□□□□□ -0.21
RAB40C-207ENST00000563109 GPX1P07203 203 aa13.71□□□□□ -0.21
RAB40C-207ENST00000563109 CRISP2P16562 243 aa13.71□□□□□ -0.21
RAB40C-207ENST00000563109 PRNTQ86SH4 94 aa13.71□□□□□ -0.21
RAB40C-207ENST00000563109 CSNK1G2-AS1Q8NCQ2 148 aa13.71□□□□□ -0.21
RAB40C-207ENST00000563109 FMC1Q96HJ9 113 aa13.71□□□□□ -0.21
RAB40C-207ENST00000563109 SGK494Q96LW2 274 aa13.71□□□□□ -0.21
RAB40C-207ENST00000563109 IGHV3OR16-12A0A075B7B8 117 aa13.7□□□□□ -0.22
RAB40C-207ENST00000563109 RBFOX3A6NFN3 312 aa13.7□□□□□ -0.22
RAB40C-207ENST00000563109 CRXO43186 299 aaPredicted RBP13.7□□□□□ -0.22
RAB40C-207ENST00000563109 GFI1BQ5VTD9 330 aa13.7□□□□□ -0.22
RAB40C-207ENST00000563109 RARRES2Q99969 163 aa13.7□□□□□ -0.22
RAB40C-207ENST00000563109 C20orf144Q9BQM9 153 aa13.7□□□□□ -0.22
RAB40C-207ENST00000563109 PRKDCP78527 4128 aaKnown RBP13.7□□□□□ -0.22
RAB40C-207ENST00000563109 TRAV34A0A0B4J273 112 aa13.69□□□□□ -0.22
RAB40C-207ENST00000563109 C7orf71A4D174 169 aa13.69□□□□□ -0.22
RAB40C-207ENST00000563109 KLLNB2CW77 178 aa13.69□□□□□ -0.22
RAB40C-207ENST00000563109 S100A9P06702 114 aaKnown RBP13.69□□□□□ -0.22
RAB40C-207ENST00000563109 Q86TA4 180 aa13.69□□□□□ -0.22
RAB40C-207ENST00000563109 TMEM256Q8N2U0 113 aa13.69□□□□□ -0.22
RAB40C-207ENST00000563109 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
RAB40C-207ENST00000563109 LINC00479Q96M42 142 aa13.69□□□□□ -0.22
RAB40C-207ENST00000563109 NIPSNAP3BQ9BS92 247 aa13.69□□□□□ -0.22
RAB40C-207ENST00000563109 TREM1Q9NP99 234 aa13.69□□□□□ -0.22
RAB40C-207ENST00000563109 IGLV2-11P01706 119 aa13.68□□□□□ -0.22
RAB40C-207ENST00000563109 RNASE4P34096 147 aaKnown RBP13.68□□□□□ -0.22
RAB40C-207ENST00000563109 TOR2AQ5JU69 321 aa13.68□□□□□ -0.22
RAB40C-207ENST00000563109 ZNF506Q5JVG8 444 aa13.68□□□□□ -0.22
RAB40C-207ENST00000563109 SAPCD1Q5SSQ6 148 aa13.68□□□□□ -0.22
RAB40C-207ENST00000563109 ZFAND2AQ8N6M9 145 aa13.68□□□□□ -0.22
RAB40C-207ENST00000563109 C11orf52Q96A22 123 aa13.68□□□□□ -0.22
RAB40C-207ENST00000563109 FAM210AQ96ND0 272 aa13.68□□□□□ -0.22
RAB40C-207ENST00000563109 EIF5A2Q9GZV4 153 aaKnown RBP13.68□□□□□ -0.22
RAB40C-207ENST00000563109 U3KQK5 164 aa13.68□□□□□ -0.22
RAB40C-207ENST00000563109 TRAV12-3A0A0B4J271 114 aa13.67□□□□□ -0.22
RAB40C-207ENST00000563109 IFITM2Q01629 132 aa13.67□□□□□ -0.22
RAB40C-207ENST00000563109 BTN1A1Q13410 526 aa13.67□□□□□ -0.22
RAB40C-207ENST00000563109 KIR3DS1Q14943 382 aa13.67□□□□□ -0.22
RAB40C-207ENST00000563109 TMEM183BQ1AE95 376 aa13.67□□□□□ -0.22
RAB40C-207ENST00000563109 ZNF705AQ6ZN79 300 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms