RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	ZNF253	O75346	499 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	IGHV3-53	P01767	116 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	NMB	P08949	121 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	CRISP2	P16562	243 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	ANXA7	P20073	488 aa	Known RBP	5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	CD300C	Q08708	224 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	TMEM128	Q5BJH2	165 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	LINC01556	Q5JQF7	62 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	SPANXN5	Q5MJ07	72 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	MORN5	Q5VZ52	161 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	LINC00305	Q7Z4B0	112 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	BPIFA4P	Q86YQ2	179 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	TMEM37	Q8WXS4	190 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	MRPL53	Q96EL3	112 aa	Known RBP	5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	C8orf49	Q96NF6	230 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	ARL6	Q9H0F7	186 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	SCP2D1	Q9UJQ7	156 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	PAIP2B	Q9ULR5	123 aa	Known RBP	5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	RABL2B	Q9UNT1	228 aa		5.51	□□□□□ -1.53
CKLF-208	ENST00000563092	STRAP	Q9Y3F4	350 aa	Known RBP	5.51	□□□□□ -1.53
CKLF-208	ENST00000563092		A0A087WXM4	84 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092		H3BP45	60 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092		J3KRW8	73 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	ATP6V1G2	O95670	118 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	SNRPC	P09234	159 aa	Known RBP	5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	SRI	P30626	198 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	WFDC2	Q14508	124 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	OPCML	Q14982	345 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	GUK1	Q16774	197 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	TMEM14EP	Q6UXP3	125 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	OR10G4	Q8NGN3	311 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	NPVF	Q9HCQ7	196 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	MRPL16	Q9NX20	251 aa	Known RBP	5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	TP53TG3	Q9ULZ0	132 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	RCL1	Q9Y2P8	373 aa	Known RBP	5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	LRP2	P98164	4655 aa		5.5	□□□□□ -1.53
CKLF-208	ENST00000563092	RNF213	Q63HN8	5207 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	TRAV5	A0A0B4J249	113 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	IGHV3-38	A0A0C4DH36	116 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092		H3BTX0	84 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	CTDSP2	O14595	271 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	PSCA	O43653	123 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	MPDU1	O75352	247 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	CCNK	O75909	580 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	ORM1	P02763	201 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	OR4E1	P0C645	316 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	GYPE	P15421	78 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	POLR2G	P62487	172 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	BTN1A1	Q13410	526 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	C9orf47	Q6ZRZ4	202 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	SCX	Q7RTU7	201 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	ZFAND2A	Q8N6M9	145 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	RASL10A	Q92737	203 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	LINC00477	Q96M19	166 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	NAA50	Q9GZZ1	169 aa	Known RBP	5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	AGPAT4-IT1	Q9H0P7	198 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	VCX3A	Q9NNX9	186 aa		5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.49	□□□□□ -1.53
CKLF-208	ENST00000563092	PKHD1L1	Q86WI1	4243 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	SMCO3	A2RU48	225 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092		E5RGE8	158 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	AGPAT2	O15120	278 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	MT1HL1	P0DM35	61 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	SLC38A11	Q08AI6	406 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	ERCC8	Q13216	396 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	LAGE3	Q14657	143 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	PRR9	Q5T870	116 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092		Q6ZQT7	251 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	ZNF546	Q86UE3	836 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	ZNF479	Q96JC4	524 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	SMIM8	Q96KF7	97 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	SOST	Q9BQB4	213 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	TXNDC17	Q9BRA2	123 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	CHAC1	Q9BUX1	264 aa		5.48	□□□□□ -1.53
CKLF-208	ENST00000563092	TRBV19	A0A075B6N1	114 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	IGHV1OR15-1	A0A075B7D0	117 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	TRGV4	A0A0C4DH28	118 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092		M0R3E3	92 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	NDUFB4	O95168	129 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	SFT2D2	O95562	160 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	RNASE4	P34096	147 aa	Known RBP	5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	ASAH1	Q13510	395 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	TDRG1	Q3Y452	100 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	SH2D6	Q7Z4S9	175 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	OR10P1	Q8NGE3	313 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	BLNK	Q8WV28	456 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	MGST2	Q99735	147 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	GGACT	Q9BVM4	153 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	PSENEN	Q9NZ42	101 aa		5.47	□□□□□ -1.53
CKLF-208	ENST00000563092	TRBV7-9	A0A0J9YWB2	115 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092		C9JCJ5	164 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	GOSR2	O14653	212 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	SFTA3	P0C7M3	94 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	TAS2R30	P59541	319 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	RRAS2	P62070	204 aa	Predicted RBP	5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	ARL16	Q0P5N6	197 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	PPP1R1A	Q13522	171 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	C10orf113	Q5VZT2	155 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	CIRBP-AS1	Q8TBR5	109 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	PCNP	Q8WW12	178 aa	Known RBP	5.46	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms